RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 GPR101Q96P66 508 aaPredicted RBP21.85■■□□□ 1.09
SDF4-206ENST00000478938 TLL2Q9Y6L7 1015 aa21.85■■□□□ 1.09
SDF4-206ENST00000478938 ATF3P18847 181 aa21.84■■□□□ 1.09
SDF4-206ENST00000478938 SSTR3P32745 418 aaPredicted RBP21.84■■□□□ 1.09
SDF4-206ENST00000478938 HSPA1LP34931 641 aa21.84■■□□□ 1.09
SDF4-206ENST00000478938 RPL22P35268 128 aaKnown RBP21.84■■□□□ 1.09
SDF4-206ENST00000478938 TUFMP49411 452 aaKnown RBP21.84■■□□□ 1.09
SDF4-206ENST00000478938 MLLT10P55197 1068 aa21.84■■□□□ 1.09
SDF4-206ENST00000478938 GALNT2Q10471 571 aa21.84■■□□□ 1.09
SDF4-206ENST00000478938 KLF10Q13118 480 aa21.84■■□□□ 1.09
SDF4-206ENST00000478938 PPM1LQ5SGD2 360 aa21.84■■□□□ 1.09
SDF4-206ENST00000478938 LDLRAP1Q5SW96 308 aa21.84■■□□□ 1.09
SDF4-206ENST00000478938 BNC2Q6ZN30 1099 aaPredicted RBP21.84■■□□□ 1.09
SDF4-206ENST00000478938 ADGRF4Q8IZF3 695 aa21.84■■□□□ 1.09
SDF4-206ENST00000478938 UBR7Q8N806 425 aa21.84■■□□□ 1.09
SDF4-206ENST00000478938 NEDD1Q8NHV4 660 aa21.84■■□□□ 1.09
SDF4-206ENST00000478938 SERPINI1Q99574 410 aa21.84■■□□□ 1.09
SDF4-206ENST00000478938 SH3GL1Q99961 368 aa21.84■■□□□ 1.09
SDF4-206ENST00000478938 C11orf70Q9BRQ4 267 aa21.84■■□□□ 1.09
SDF4-206ENST00000478938 CNOT11Q9UKZ1 510 aaKnown RBP21.84■■□□□ 1.09
SDF4-206ENST00000478938 AP4S1Q9Y587 144 aa21.84■■□□□ 1.09
SDF4-206ENST00000478938 SCN7AQ01118 1682 aa21.84■■□□□ 1.09
SDF4-206ENST00000478938 PNMA6FA0A0J9YX94 578 aa21.84■■□□□ 1.09
SDF4-206ENST00000478938 KRT37O76014 449 aa21.84■■□□□ 1.09
SDF4-206ENST00000478938 MYO1DO94832 1006 aa21.84■■□□□ 1.09
SDF4-206ENST00000478938 CHRNB1P11230 501 aa21.84■■□□□ 1.09
SDF4-206ENST00000478938 DCKP27707 260 aa21.84■■□□□ 1.09
SDF4-206ENST00000478938 SLC16A2P36021 539 aa21.84■■□□□ 1.09
SDF4-206ENST00000478938 GRIA3P42263 894 aa21.84■■□□□ 1.09
SDF4-206ENST00000478938 NKX2-5P52952 324 aaPredicted RBP21.84■■□□□ 1.09
SDF4-206ENST00000478938 NRLP54845 237 aa21.84■■□□□ 1.09
SDF4-206ENST00000478938 TPTEP56180 551 aa21.84■■□□□ 1.09
SDF4-206ENST00000478938 LRP8Q14114 963 aa21.84■■□□□ 1.09
SDF4-206ENST00000478938 RAB39AQ14964 217 aa21.84■■□□□ 1.09
SDF4-206ENST00000478938 ODR4Q5SWX8 454 aa21.84■■□□□ 1.09
SDF4-206ENST00000478938 TTBK2Q6IQ55 1244 aa21.84■■□□□ 1.09
SDF4-206ENST00000478938 CLEC10AQ8IUN9 316 aa21.84■■□□□ 1.09
SDF4-206ENST00000478938 PDZD8Q8NEN9 1154 aa21.84■■□□□ 1.09
SDF4-206ENST00000478938 CAPSLQ8WWF8 208 aa21.84■■□□□ 1.09
SDF4-206ENST00000478938 LENG8Q96PV6 779 aaPredicted RBP21.84■■□□□ 1.09
SDF4-206ENST00000478938 DOK1Q99704 481 aa21.84■■□□□ 1.09
SDF4-206ENST00000478938 B3GNT3Q9Y2A9 372 aa21.84■■□□□ 1.09
SDF4-206ENST00000478938 STX16-NPEPL1H3BU86 382 aa21.83■■□□□ 1.09
SDF4-206ENST00000478938 AVILO75366 819 aa21.83■■□□□ 1.09
SDF4-206ENST00000478938 TCN1P20061 433 aaPredicted RBP21.83■■□□□ 1.09
SDF4-206ENST00000478938 KCNA4P22459 653 aa21.83■■□□□ 1.09
SDF4-206ENST00000478938 SERPINB5P36952 375 aa21.83■■□□□ 1.09
SDF4-206ENST00000478938 BASP1P80723 227 aaKnown RBP21.83■■□□□ 1.09
SDF4-206ENST00000478938 ANGEL2Q5VTE6 544 aaKnown RBP21.83■■□□□ 1.09
SDF4-206ENST00000478938 SPOCD1Q6ZMY3 1216 aa21.83■■□□□ 1.09
SDF4-206ENST00000478938 FAM156AQ8NDB6 213 aa21.83■■□□□ 1.09
SDF4-206ENST00000478938 NKD2Q969F2 451 aaPredicted RBP21.83■■□□□ 1.09
SDF4-206ENST00000478938 ATP6V1E2Q96A05 226 aa21.83■■□□□ 1.09
SDF4-206ENST00000478938 PSD2Q9BQI7 771 aa21.83■■□□□ 1.09
SDF4-206ENST00000478938 CBWD1Q9BRT8 395 aa21.83■■□□□ 1.09
SDF4-206ENST00000478938 ZNF341Q9BYN7 854 aa21.83■■□□□ 1.09
SDF4-206ENST00000478938 RSL1D1O76021 490 aaKnown RBP21.83■■□□□ 1.08
SDF4-206ENST00000478938 EIF2S1P05198 315 aaKnown RBP21.83■■□□□ 1.08
SDF4-206ENST00000478938 ENO2P09104 434 aaPredicted RBP21.83■■□□□ 1.08
SDF4-206ENST00000478938 PSMC5P62195 406 aa21.83■■□□□ 1.08
SDF4-206ENST00000478938 PIGGQ5H8A4 983 aa21.83■■□□□ 1.08
SDF4-206ENST00000478938 MBLAC2Q68D91 279 aa21.83■■□□□ 1.08
SDF4-206ENST00000478938 SCARA3Q6AZY7 606 aa21.83■■□□□ 1.08
SDF4-206ENST00000478938 C1orf186Q6ZWK4 172 aa21.83■■□□□ 1.08
SDF4-206ENST00000478938 ITIH5Q86UX2 942 aa21.83■■□□□ 1.08
SDF4-206ENST00000478938 EIF2AK1Q9BQI3 630 aaKnown RBP21.83■■□□□ 1.08
SDF4-206ENST00000478938 TDRD1Q9BXT4 1180 aaKnown RBP21.83■■□□□ 1.08
SDF4-206ENST00000478938 SLC4A5Q9BY07 1137 aa21.83■■□□□ 1.08
SDF4-206ENST00000478938 MROQ9BYG7 248 aa21.83■■□□□ 1.08
SDF4-206ENST00000478938 STN1Q9H668 368 aaKnown RBP21.83■■□□□ 1.08
SDF4-206ENST00000478938 TMOD3Q9NYL9 352 aa21.83■■□□□ 1.08
SDF4-206ENST00000478938 RABL2BQ9UNT1 228 aa21.83■■□□□ 1.08
SDF4-206ENST00000478938 TESPA1A2RU30 521 aaPredicted RBP21.82■■□□□ 1.08
SDF4-206ENST00000478938 GNAO1P09471 354 aa21.82■■□□□ 1.08
SDF4-206ENST00000478938 NFATC3Q12968 1075 aa21.82■■□□□ 1.08
SDF4-206ENST00000478938 SLC9A4Q6AI14 798 aa21.82■■□□□ 1.08
SDF4-206ENST00000478938 TXNRD3NBQ6F5E7 133 aa21.82■■□□□ 1.08
SDF4-206ENST00000478938 ARCQ7LC44 396 aa21.82■■□□□ 1.08
SDF4-206ENST00000478938 C11orf74Q86VG3 221 aa21.82■■□□□ 1.08
SDF4-206ENST00000478938 TTC30AQ86WT1 665 aa21.82■■□□□ 1.08
SDF4-206ENST00000478938 SNX29P2Q8IUI4 249 aa21.82■■□□□ 1.08
SDF4-206ENST00000478938 RCOR2Q8IZ40 523 aa21.82■■□□□ 1.08
SDF4-206ENST00000478938 DSELQ8IZU8 1212 aa21.82■■□□□ 1.08
SDF4-206ENST00000478938 LRTOMTQ8WZ04 291 aa21.82■■□□□ 1.08
SDF4-206ENST00000478938 ZNRF3Q9ULT6 936 aa21.82■■□□□ 1.08
SDF4-206ENST00000478938 PRPF19Q9UMS4 504 aaKnown RBP21.82■■□□□ 1.08
SDF4-206ENST00000478938 IFT52Q9Y366 437 aa21.82■■□□□ 1.08
SDF4-206ENST00000478938 TOGARAM1Q9Y4F4 1720 aa21.82■■□□□ 1.08
SDF4-206ENST00000478938 GMNNO75496 209 aa21.82■■□□□ 1.08
SDF4-206ENST00000478938 KRT75O95678 551 aa21.82■■□□□ 1.08
SDF4-206ENST00000478938 P4HBP07237 508 aaKnown RBP21.82■■□□□ 1.08
SDF4-206ENST00000478938 LDHCP07864 332 aa21.82■■□□□ 1.08
SDF4-206ENST00000478938 ZNF618Q5T7W0 954 aa21.82■■□□□ 1.08
SDF4-206ENST00000478938 PPP1R18Q6NYC8 613 aa21.82■■□□□ 1.08
SDF4-206ENST00000478938 ZNF420Q8TAQ5 688 aaPredicted RBP21.82■■□□□ 1.08
SDF4-206ENST00000478938 FAR2Q96K12 515 aa21.82■■□□□ 1.08
SDF4-206ENST00000478938 SPATA17Q96L03 361 aa21.82■■□□□ 1.08
SDF4-206ENST00000478938 CIB1Q99828 191 aa21.82■■□□□ 1.08
SDF4-206ENST00000478938 DNAJC28Q9NX36 388 aa21.82■■□□□ 1.08
SDF4-206ENST00000478938 FGF3P11487 239 aaPredicted RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms