RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 IGLV3-25P01717 112 aa10.68□□□□□ -0.7
HDAC6-222ENST00000478095 CALB1P05937 261 aa10.68□□□□□ -0.7
HDAC6-222ENST00000478095 CHRNB1P11230 501 aa10.68□□□□□ -0.7
HDAC6-222ENST00000478095 TYRP14679 529 aa10.68□□□□□ -0.7
HDAC6-222ENST00000478095 SCNN1AP37088 669 aa10.68□□□□□ -0.7
HDAC6-222ENST00000478095 OPRD1P41143 372 aa10.68□□□□□ -0.7
HDAC6-222ENST00000478095 MATKP42679 507 aa10.68□□□□□ -0.7
HDAC6-222ENST00000478095 SULT1E1P49888 294 aa10.68□□□□□ -0.7
HDAC6-222ENST00000478095 AMPD2Q01433 879 aa10.68□□□□□ -0.7
HDAC6-222ENST00000478095 RING1Q06587 406 aa10.68□□□□□ -0.7
HDAC6-222ENST00000478095 GRSF1Q12849 480 aaKnown RBP eCLIP10.68□□□□□ -0.7
HDAC6-222ENST00000478095 FZD5Q13467 585 aa10.68□□□□□ -0.7
HDAC6-222ENST00000478095 TRIM14Q14142 442 aa10.68□□□□□ -0.7
HDAC6-222ENST00000478095 ZC3H12AQ5D1E8 599 aaKnown RBP10.68□□□□□ -0.7
HDAC6-222ENST00000478095 TMEM196Q5HYL7 178 aa10.68□□□□□ -0.7
HDAC6-222ENST00000478095 OTUD1Q5VV17 481 aaPredicted RBP10.68□□□□□ -0.7
HDAC6-222ENST00000478095 NUGGCQ68CJ6 796 aa10.68□□□□□ -0.7
HDAC6-222ENST00000478095 ACAD10Q6JQN1 1059 aa10.68□□□□□ -0.7
HDAC6-222ENST00000478095 C1orf228Q6PIY5 440 aa10.68□□□□□ -0.7
HDAC6-222ENST00000478095 SFTPA1Q8IWL2 248 aa10.68□□□□□ -0.7
HDAC6-222ENST00000478095 JOSD2Q8TAC2 188 aa10.68□□□□□ -0.7
HDAC6-222ENST00000478095 SYN2Q92777 582 aaPredicted RBP10.68□□□□□ -0.7
HDAC6-222ENST00000478095 CD101Q93033 1021 aa10.68□□□□□ -0.7
HDAC6-222ENST00000478095 RNF34Q969K3 372 aa10.68□□□□□ -0.7
HDAC6-222ENST00000478095 SLC39A13Q96H72 371 aa10.68□□□□□ -0.7
HDAC6-222ENST00000478095 CFAP57Q96MR6 1250 aa10.68□□□□□ -0.7
HDAC6-222ENST00000478095 TBCBQ99426 244 aa10.68□□□□□ -0.7
HDAC6-222ENST00000478095 EPAS1Q99814 870 aa10.68□□□□□ -0.7
HDAC6-222ENST00000478095 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.68□□□□□ -0.7
HDAC6-222ENST00000478095 LMAN1LQ9HAT1 526 aa10.68□□□□□ -0.7
HDAC6-222ENST00000478095 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.68□□□□□ -0.7
HDAC6-222ENST00000478095 DLGAP2Q9P1A6 1054 aa10.68□□□□□ -0.7
HDAC6-222ENST00000478095 RAPGEFL1Q9UHV5 662 aa10.68□□□□□ -0.7
HDAC6-222ENST00000478095 TMEM59LQ9UK28 342 aa10.68□□□□□ -0.7
HDAC6-222ENST00000478095 ANAPC1Q9H1A4 1944 aa10.68□□□□□ -0.7
HDAC6-222ENST00000478095 MYH10P35580 1976 aa10.67□□□□□ -0.7
HDAC6-222ENST00000478095 ZNF638Q14966 1978 aaKnown RBP10.67□□□□□ -0.7
HDAC6-222ENST00000478095 ANTXRLA6NF34 631 aa10.67□□□□□ -0.7
HDAC6-222ENST00000478095 MFAP3LO75121 409 aa10.67□□□□□ -0.7
HDAC6-222ENST00000478095 TULP3O75386 442 aa10.67□□□□□ -0.7
HDAC6-222ENST00000478095 APOEP02649 317 aa10.67□□□□□ -0.7
HDAC6-222ENST00000478095 SERPING1P05155 500 aa10.67□□□□□ -0.7
HDAC6-222ENST00000478095 TPM1P09493 284 aa10.67□□□□□ -0.7
HDAC6-222ENST00000478095 RRM1P23921 792 aa10.67□□□□□ -0.7
HDAC6-222ENST00000478095 SLC6A4P31645 630 aa10.67□□□□□ -0.7
HDAC6-222ENST00000478095 NOS2P35228 1153 aa10.67□□□□□ -0.7
HDAC6-222ENST00000478095 CHKAP35790 457 aa10.67□□□□□ -0.7
HDAC6-222ENST00000478095 GGCXP38435 758 aa10.67□□□□□ -0.7
HDAC6-222ENST00000478095 SLC11A2P49281 568 aa10.67□□□□□ -0.7
HDAC6-222ENST00000478095 SGSHP51688 502 aa10.67□□□□□ -0.7
HDAC6-222ENST00000478095 ZNF75DP51815 510 aa10.67□□□□□ -0.7
HDAC6-222ENST00000478095 ATXN1P54253 815 aaKnown RBP10.67□□□□□ -0.7
HDAC6-222ENST00000478095 ADKP55263 362 aaKnown RBP10.67□□□□□ -0.7
HDAC6-222ENST00000478095 SEC13P55735 322 aa10.67□□□□□ -0.7
HDAC6-222ENST00000478095 ATP11AP98196 1134 aa10.67□□□□□ -0.7
HDAC6-222ENST00000478095 NNTQ13423 1086 aa10.67□□□□□ -0.7
HDAC6-222ENST00000478095 CCINQ13939 588 aa10.67□□□□□ -0.7
HDAC6-222ENST00000478095 NADSYN1Q6IA69 706 aa10.67□□□□□ -0.7
HDAC6-222ENST00000478095 DNAJC24Q6P3W2 148 aa10.67□□□□□ -0.7
HDAC6-222ENST00000478095 RFWD3Q6PCD5 774 aa10.67□□□□□ -0.7
HDAC6-222ENST00000478095 UNC45BQ8IWX7 931 aa10.67□□□□□ -0.7
HDAC6-222ENST00000478095 ETFBKMTQ8IXQ9 262 aa10.67□□□□□ -0.7
HDAC6-222ENST00000478095 MCOLN2Q8IZK6 566 aa10.67□□□□□ -0.7
HDAC6-222ENST00000478095 EZH1Q92800 747 aaPredicted RBP10.67□□□□□ -0.7
HDAC6-222ENST00000478095 NELL2Q99435 816 aa10.67□□□□□ -0.7
HDAC6-222ENST00000478095 NPY6RQ99463 290 aa10.67□□□□□ -0.7
HDAC6-222ENST00000478095 SELENOOQ9BVL4 669 aa10.67□□□□□ -0.7
HDAC6-222ENST00000478095 OSBPL6Q9BZF3 934 aa10.67□□□□□ -0.7
HDAC6-222ENST00000478095 ARHGEF4Q9NR80 690 aa10.67□□□□□ -0.7
HDAC6-222ENST00000478095 PIGVQ9NUD9 493 aa10.67□□□□□ -0.7
HDAC6-222ENST00000478095 DNAJC17Q9NVM6 304 aaKnown RBP10.67□□□□□ -0.7
HDAC6-222ENST00000478095 MARK1Q9P0L2 795 aa10.67□□□□□ -0.7
HDAC6-222ENST00000478095 ARHGAP20Q9P2F6 1191 aa10.67□□□□□ -0.7
HDAC6-222ENST00000478095 WDR35Q9P2L0 1181 aa10.67□□□□□ -0.7
HDAC6-222ENST00000478095 ADAMTS1Q9UHI8 967 aa10.67□□□□□ -0.7
HDAC6-222ENST00000478095 STAP1Q9ULZ2 295 aa10.67□□□□□ -0.7
HDAC6-222ENST00000478095 NCAM2O15394 837 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 ACSL4O60488 711 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 RNF40O75150 1001 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 LATS1O95835 1130 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 PENKP01210 267 aaPredicted RBP10.66□□□□□ -0.7
HDAC6-222ENST00000478095 FTLP02792 175 aaPredicted RBP10.66□□□□□ -0.7
HDAC6-222ENST00000478095 CYBBP04839 570 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 KRT3P12035 628 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 PDGFRAP16234 1089 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 DRD1P21728 446 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 CCR1P32246 355 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 GBP1P32455 592 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 RFC1P35251 1148 aaPredicted RBP10.66□□□□□ -0.7
HDAC6-222ENST00000478095 GSCP56915 257 aaPredicted RBP10.66□□□□□ -0.7
HDAC6-222ENST00000478095 DEUP1Q05D60 604 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 MTAPQ13126 283 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 EIF4EBP2Q13542 120 aaPredicted RBP10.66□□□□□ -0.7
HDAC6-222ENST00000478095 LRRC32Q14392 662 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 GAS6Q14393 721 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 CDO1Q16878 200 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 C15orf59Q2T9L4 293 aaPredicted RBP10.66□□□□□ -0.7
HDAC6-222ENST00000478095 SLC25A52Q3SY17 297 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 RAB6CQ53S08 254 aa10.66□□□□□ -0.7
HDAC6-222ENST00000478095 FAM133BQ5BKY9 247 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms