RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 SPRED3Q2MJR0 410 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 ZNF699Q32M78 642 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 TMEM31Q5JXX7 168 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 ZBTB41Q5SVQ8 909 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 ZFYVE27Q5T4F4 411 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 UBAP2Q5T6F2 1119 aaKnown RBP5.17□□□□□ -1.58
SF3B6-202ENST00000478050 PEAR1Q5VY43 1037 aaPredicted RBP5.17□□□□□ -1.58
SF3B6-202ENST00000478050 FBXW10Q5XX13 1052 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 LLGL2Q6P1M3 1020 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 DCUN1D2Q6PH85 259 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 PPP1R21Q6ZMI0 780 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 ARHGEF18Q6ZSZ5 1173 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 GSTA5Q7RTV2 222 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 PLPPR4Q7Z2D5 763 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 POLNQ7Z5Q5 900 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 PCGF5Q86SE9 256 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 PHLDB2Q86SQ0 1253 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 ERICH1Q86X53 443 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 TDRPQ86YL5 185 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 GALNT12Q8IXK2 581 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 ALLCQ8N6M5 410 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 CD99L2Q8TCZ2 262 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 CKAP2Q8WWK9 683 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 PRPF31Q8WWY3 499 aaKnown RBP5.17□□□□□ -1.58
SF3B6-202ENST00000478050 CCT6BQ92526 530 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 NKD2Q969F2 451 aaPredicted RBP5.17□□□□□ -1.58
SF3B6-202ENST00000478050 ANKRD36BP1Q96IX9 119 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 PRMT1Q99873 361 aaKnown RBP5.17□□□□□ -1.58
SF3B6-202ENST00000478050 GDF15Q99988 308 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 TCHPQ9BT92 498 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 LRFN3Q9BTN0 628 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 HEMGNQ9BXL5 484 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 PCDH9Q9HC56 1237 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 SLC40A1Q9NP59 571 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 UBN1Q9NPG3 1134 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 PRDM7Q9NQW5 492 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 CISHQ9NSE2 258 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 NKIRAS1Q9NYS0 192 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 GGA3Q9NZ52 723 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 SENP1Q9P0U3 644 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 WDR35Q9P2L0 1181 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 CPSF3Q9UKF6 684 aaKnown RBP5.17□□□□□ -1.58
SF3B6-202ENST00000478050 SHOC2Q9UQ13 582 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 EFR3BQ9Y2G0 817 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 R3HDM2Q9Y2K5 976 aaKnown RBP5.17□□□□□ -1.58
SF3B6-202ENST00000478050 SNCAIPQ9Y6H5 919 aa5.17□□□□□ -1.58
SF3B6-202ENST00000478050 ZNF236Q9UL36 1845 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 hCG_1818297A0A087WSY0 165 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 IGKV6-21A0A0C4DH24 114 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 CFAP73A6NFT4 308 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 SIGLEC16A6NMB1 481 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 O00370 1275 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 DNM1LO00429 736 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 NOP56O00567 594 aaKnown RBP5.16□□□□□ -1.58
SF3B6-202ENST00000478050 ACKR2O00590 384 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 ABLIM1O14639 778 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 HBP1O60381 514 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 SNX3O60493 162 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 RASSF9O75901 435 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 SUN1O94901 812 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 OAS1P00973 400 aaKnown RBP5.16□□□□□ -1.58
SF3B6-202ENST00000478050 CST3P01034 146 aaPredicted RBP5.16□□□□□ -1.58
SF3B6-202ENST00000478050 CEACAM5P06731 702 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 ITGAVP06756 1048 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 KRT7P08729 469 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 HOXC6P09630 235 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 BRAFP15056 766 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 FOSL2P15408 326 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 ATF7P17544 494 aaPredicted RBP5.16□□□□□ -1.58
SF3B6-202ENST00000478050 PROZP22891 400 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 GSTT1P30711 240 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 STX2P32856 288 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 TNFSF9P41273 254 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 IFNAR2P48551 515 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 VPS41P49754 854 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 ARSEP51690 589 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 SLC18A1P54219 525 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 MYL6P60660 151 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 RPL7AP62424 266 aaKnown RBP5.16□□□□□ -1.58
SF3B6-202ENST00000478050 IRX3P78415 501 aaPredicted RBP5.16□□□□□ -1.58
SF3B6-202ENST00000478050 LACTBP83111 547 aaPredicted RBP5.16□□□□□ -1.58
SF3B6-202ENST00000478050 TFAMQ00059 246 aaKnown RBP5.16□□□□□ -1.58
SF3B6-202ENST00000478050 TNFAIP2Q03169 654 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 ZNF252P-AS1Q0IIN9 211 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 LAMTOR4Q0VGL1 99 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 XRCC4Q13426 336 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 ACAP1Q15027 740 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 RASA2Q15283 850 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 LLGL1Q15334 1064 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 TRIP13Q15645 432 aaPredicted RBP5.16□□□□□ -1.58
SF3B6-202ENST00000478050 OASLQ15646 514 aaKnown RBP5.16□□□□□ -1.58
SF3B6-202ENST00000478050 KYAT1Q16773 422 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 P3H1Q32P28 736 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 CCDC38Q502W7 563 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 C2CD6Q53TS8 623 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 TFDP3Q5H9I0 405 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 ZNF667Q5HYK9 610 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 TREML2Q5T2D2 321 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 ATF7IP2Q5U623 682 aa5.16□□□□□ -1.58
SF3B6-202ENST00000478050 PRAMEF18Q5VWM3 479 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms