RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 ITM2CQ9NQX7 267 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 SPATS2LQ9NUQ6 558 aaKnown RBP3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 POLR3BQ9NW08 1133 aaPredicted RBP3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 GDAP2Q9NXN4 497 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 AASSQ9UDR5 926 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 FBXO40Q9UH90 709 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 DDX25Q9UHL0 483 aaKnown RBP3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 SCAF8Q9UPN6 1271 aaKnown RBP3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 TIMM22Q9Y584 194 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 CLDN16Q9Y5I7 305 aa3.72□□□□□ -1.81
FNDC3B-209ENST00000478016 RIMS1Q86UR5 1692 aaKnown RBP3.71□□□□□ -1.81
FNDC3B-209ENST00000478016 MYPNQ86TC9 1320 aa3.71□□□□□ -1.81
FNDC3B-209ENST00000478016 EFCAB5A4FU69 1503 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 CDK13Q14004 1512 aaKnown RBP3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 RICTORQ6R327 1708 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 SIGLEC1Q9BZZ2 1709 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 A0A1W2PPH5 198 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 RGSL1A5PLK6 1076 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 LRRIQ4A6NIV6 560 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 SLC9B1P1A6NJY1 282 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 GOLGA6L19H0YKK7 550 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 UBE2CO00762 179 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 ARHGAP6O43182 974 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 SMAD6O43541 496 aaKnown RBP3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 PEX1O43933 1283 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 SMPD2O60906 423 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 H2AFYO75367 372 aaKnown RBP3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 TMEM63AO94886 807 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 CSPG5O95196 566 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 PCDH8O95206 1070 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 STARD3NLO95772 234 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 SERPINC1P01008 464 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 CSTBP04080 98 aaKnown RBP3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 ATP5BP06576 529 aaKnown RBP3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 PFKMP08237 780 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 LTA4HP09960 611 aaKnown RBP3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 HSPA8P11142 646 aaKnown RBP3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 PDHBP11177 359 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 CDK4P11802 303 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 SYN1P17600 705 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 CDH3P22223 829 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 EEF1GP26641 437 aaKnown RBP3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 PRKAR2BP31323 418 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 PSMC2P35998 433 aaKnown RBP3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 SLC16A2P36021 539 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 RGS2P41220 211 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 SCNN1GP51170 649 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 CLCN4P51793 760 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 MNAT1P51948 309 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 SLC12A3P55017 1021 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 NR1H2P55055 460 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 MANFP55145 182 aaKnown RBP3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 ANTXR2P58335 489 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 RAC3P60763 192 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 DSTNP60981 165 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 ERVK-21P61565 698 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 IFI35P80217 286 aaPredicted RBP3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 DMPKQ09013 629 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 NFYCQ13952 458 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 NAA25Q14CX7 972 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 AAK1Q2M2I8 961 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 ABCB5Q2M3G0 1257 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 C2orf76Q3KRA6 126 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 FLYWCH1Q4VC44 716 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 CYP4A22Q5TCH4 519 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 SLFN13Q68D06 897 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 NAIF1Q69YI7 327 aaPredicted RBP3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 ADALQ6DHV7 355 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 MIS18BP1Q6P0N0 1132 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 IYDQ6PHW0 289 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 LILRA6Q6PI73 481 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 RGS9BPQ6ZS82 235 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 FAM47EQ6ZV65 393 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 USP30Q70CQ3 517 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 RHOUQ7L0Q8 258 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 CD302Q8IX05 232 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 C12orf56Q8IXR9 622 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 CACNA2D3Q8IZS8 1091 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 ANKRD35Q8N283 1001 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 CDYL2Q8N8U2 506 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 ANKRD20A12PQ8NF67 263 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 ETNPPLQ8TBG4 499 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 COG1Q8WTW3 980 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 DNAAF4Q8WXU2 420 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 HSPH1Q92598 858 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 DDX17Q92841 729 aaKnown RBP3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 LPPQ93052 612 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 HSPBAP1Q96EW2 488 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 LTV1Q96GA3 475 aaPredicted RBP3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 SNF8Q96H20 258 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 ZSCAN31Q96LW9 406 aaPredicted RBP3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 RIPOR3Q96MK2 946 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 WDR92Q96MX6 357 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 SPXQ9BT56 116 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 ANO3Q9BYT9 981 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.71□□□□□ -1.824e-12■■■■■ 48.5
FNDC3B-209ENST00000478016 ZMAT3Q9HA38 289 aaKnown RBP3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 CLK4Q9HAZ1 481 aaKnown RBP3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 SDHAF3Q9NRP4 125 aa3.71□□□□□ -1.82
FNDC3B-209ENST00000478016 GPRC5BQ9NZH0 403 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms