RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 PEPDP12955 493 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 ATF7P17544 494 aaPredicted RBP3.8□□□□□ -1.8
TARDBP-208ENST00000477447 NDUFS1P28331 727 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 DUSP1P28562 367 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 SLC8A1P32418 973 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 VPS41P49754 854 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 PNLIPRP1P54315 467 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 POLE2P56282 527 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 TUBA4AP68366 448 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 NHLH1Q02575 133 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 FOXO1Q12778 655 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 POSTNQ15063 836 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 RPS6KA2Q15349 733 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 AAK1Q2M2I8 961 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 C4orf46Q504U0 113 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 TMEM63BQ5T3F8 832 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 TANGO2Q6ICL3 276 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 JMJD6Q6NYC1 403 aaPredicted RBP3.8□□□□□ -1.8
TARDBP-208ENST00000477447 ACSM6Q6P461 480 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 RRAGAQ7L523 313 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 C16orf71Q8IYS4 520 aaPredicted RBP3.8□□□□□ -1.8
TARDBP-208ENST00000477447 SPATA5Q8NB90 893 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 SEMA6DQ8NFY4 1073 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 SCAMP5Q8TAC9 235 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 RUBCNQ92622 972 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 C3orf49Q96BT1 292 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 EFHD1Q9BUP0 239 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 MECRQ9BV79 373 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 ELOVL1Q9BW60 279 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 TMEM120AQ9BXJ8 343 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 RNF26Q9BY78 433 aaPredicted RBP3.8□□□□□ -1.8
TARDBP-208ENST00000477447 ELAC1Q9H777 363 aaKnown RBP3.8□□□□□ -1.8
TARDBP-208ENST00000477447 KCNK9Q9NPC2 374 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 PRDM8Q9NQV8 689 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 RXFP3Q9NSD7 469 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 ARL8BQ9NVJ2 186 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 GAR1Q9NY12 217 aaKnown RBP3.8□□□□□ -1.8
TARDBP-208ENST00000477447 PTGFRNQ9P2B2 879 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 RAB21Q9UL25 225 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 TRPC5Q9UL62 973 aaPredicted RBP3.8□□□□□ -1.8
TARDBP-208ENST00000477447 DAPP1Q9UN19 280 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 CNTN6Q9UQ52 1028 aa3.8□□□□□ -1.8
TARDBP-208ENST00000477447 COL11A2P13942 1736 aaPredicted RBP3.79□□□□□ -1.8
TARDBP-208ENST00000477447 LOC105369274A0A096LPK9 316 aa3.79□□□□□ -1.8
TARDBP-208ENST00000477447 LOC102723532A0A0G2JNH3 316 aa3.79□□□□□ -1.8
TARDBP-208ENST00000477447 SLC38A8A6NNN8 435 aa3.79□□□□□ -1.8
TARDBP-208ENST00000477447 TTC34A8MYJ7 566 aa3.79□□□□□ -1.8
TARDBP-208ENST00000477447 PIP5K1CO60331 668 aa3.79□□□□□ -1.8
TARDBP-208ENST00000477447 EIF3JO75822 258 aaKnown RBP3.79□□□□□ -1.8
TARDBP-208ENST00000477447 LARGE1O95461 756 aa3.79□□□□□ -1.8
TARDBP-208ENST00000477447 GRK5P34947 590 aa3.79□□□□□ -1.8
TARDBP-208ENST00000477447 FAM3BP58499 235 aaPredicted RBP3.79□□□□□ -1.8
TARDBP-208ENST00000477447 TAS2R50P59544 299 aa3.79□□□□□ -1.8
TARDBP-208ENST00000477447 GAB1Q13480 694 aa3.79□□□□□ -1.8
TARDBP-208ENST00000477447 DHX8Q14562 1220 aaKnown RBP3.79□□□□□ -1.8
TARDBP-208ENST00000477447 ZNF268Q14587 947 aaPredicted RBP3.79□□□□□ -1.8
TARDBP-208ENST00000477447 TRIM60Q495X7 471 aa3.79□□□□□ -1.8
TARDBP-208ENST00000477447 ZNF569Q5MCW4 686 aa3.79□□□□□ -1.8
TARDBP-208ENST00000477447 GORABQ5T7V8 394 aa3.79□□□□□ -1.8
TARDBP-208ENST00000477447 WDR93Q6P2C0 686 aa3.79□□□□□ -1.8
TARDBP-208ENST00000477447 NFRKBQ6P4R8 1299 aa3.79□□□□□ -1.8
TARDBP-208ENST00000477447 RANBP10Q6VN20 620 aa3.79□□□□□ -1.8
TARDBP-208ENST00000477447 KYAT3Q6YP21 454 aaKnown RBP3.79□□□□□ -1.8
TARDBP-208ENST00000477447 ZNF66Q6ZN08 573 aa3.79□□□□□ -1.8
TARDBP-208ENST00000477447 EXOC8Q8IYI6 725 aa3.79□□□□□ -1.8
TARDBP-208ENST00000477447 OR4N4Q8N0Y3 316 aa3.79□□□□□ -1.8
TARDBP-208ENST00000477447 NKAPQ8N5F7 415 aaKnown RBP3.79□□□□□ -1.8
TARDBP-208ENST00000477447 OTUD7AQ8TE49 926 aaPredicted RBP3.79□□□□□ -1.8
TARDBP-208ENST00000477447 PNISRQ8TF01 805 aaKnown RBP3.79□□□□□ -1.8
TARDBP-208ENST00000477447 GLMPQ8WWB7 406 aa3.79□□□□□ -1.8
TARDBP-208ENST00000477447 RSC1A1Q92681 617 aa3.79□□□□□ -1.8
TARDBP-208ENST00000477447 DPF1Q92782 380 aa3.79□□□□□ -1.8
TARDBP-208ENST00000477447 TRIM63Q969Q1 353 aa3.79□□□□□ -1.8
TARDBP-208ENST00000477447 C5orf34Q96MH7 638 aa3.79□□□□□ -1.8
TARDBP-208ENST00000477447 TRAPPC9Q96Q05 1148 aa3.79□□□□□ -1.8
TARDBP-208ENST00000477447 HERPUD2Q9BSE4 406 aa3.79□□□□□ -1.8
TARDBP-208ENST00000477447 NUAK2Q9H093 628 aa3.79□□□□□ -1.8
TARDBP-208ENST00000477447 VPS16Q9H269 839 aa3.79□□□□□ -1.8
TARDBP-208ENST00000477447 SEPSECSQ9HD40 501 aaKnown RBP3.79□□□□□ -1.8
TARDBP-208ENST00000477447 ASNSD1Q9NWL6 643 aa3.79□□□□□ -1.8
TARDBP-208ENST00000477447 C19orf53Q9UNZ5 99 aaPredicted RBP3.79□□□□□ -1.8
TARDBP-208ENST00000477447 ZBTB1Q9Y2K1 713 aa3.79□□□□□ -1.8
TARDBP-208ENST00000477447 HEMK1Q9Y5R4 338 aaPredicted RBP3.79□□□□□ -1.8
TARDBP-208ENST00000477447 SPATA31A1Q5TZJ5 1347 aa3.78□□□□□ -1.8
TARDBP-208ENST00000477447 FNDC1Q4ZHG4 1894 aaPredicted RBP3.78□□□□□ -1.8
TARDBP-208ENST00000477447 TBC1D3DA0A087WVF3 549 aa3.78□□□□□ -1.8
TARDBP-208ENST00000477447 TBC1D3IA0A087WXS9 549 aa3.78□□□□□ -1.8
TARDBP-208ENST00000477447 TBC1D3EA0A087X179 549 aa3.78□□□□□ -1.8
TARDBP-208ENST00000477447 TBC1D3KA0A087X1G2 549 aa3.78□□□□□ -1.8
TARDBP-208ENST00000477447 TBC1D3BA6NDS4 549 aa3.78□□□□□ -1.8
TARDBP-208ENST00000477447 TBC1D3FA6NER0 549 aaPredicted RBP3.78□□□□□ -1.8
TARDBP-208ENST00000477447 WIPF3A6NGB9 483 aa3.78□□□□□ -1.8
TARDBP-208ENST00000477447 EFCAB8A8MWE9 144 aa3.78□□□□□ -1.8
TARDBP-208ENST00000477447 TBC1D3LB9A6J9 549 aa3.78□□□□□ -1.8
TARDBP-208ENST00000477447 PRYO14603 147 aa3.78□□□□□ -1.8
TARDBP-208ENST00000477447 NKX2-8O15522 239 aa3.78□□□□□ -1.8
TARDBP-208ENST00000477447 RBMXL2O75526 392 aaKnown RBP3.78□□□□□ -1.8
TARDBP-208ENST00000477447 ALDOAP04075 364 aaKnown RBP3.78□□□□□ -1.8
TARDBP-208ENST00000477447 TBC1D3HP0C7X1 549 aa3.78□□□□□ -1.8
TARDBP-208ENST00000477447 MPGP29372 298 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms