RNA–Protein interactions for RNA: ENST00000477155.5

CCDC30-209, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 3,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-209ENST00000477155 LRIG3Q6UXM1 1119 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 RFX8Q6ZV50 586 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 CCDC13Q8IYE1 715 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 ZBED8Q8IZ13 594 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 FBXO22Q8NEZ5 403 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 IRGQQ8WZA9 623 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 ATP6V1G3Q96LB4 118 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 NINJ2Q9NZG7 142 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 XPO7Q9UIA9 1087 aaKnown RBP6.86□□□□□ -1.31
CCDC30-209ENST00000477155 MTMR11A4FU01 709 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 OR6C75A6NL08 312 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 PARNO95453 639 aaKnown RBP6.86□□□□□ -1.31
CCDC30-209ENST00000477155 TTC4O95801 387 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 ZFXP17010 805 aaPredicted RBP6.86□□□□□ -1.31
CCDC30-209ENST00000477155 DNAJB2P25686 324 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 CXCR3P49682 368 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 MORF4L2Q15014 288 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 FNBP1LQ5T0N5 605 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 VSTM1Q6UX27 236 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 DENND5BQ6ZUT9 1274 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 PPIL6Q8IXY8 311 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 ZCCHC9Q8N567 271 aaKnown RBP6.86□□□□□ -1.31
CCDC30-209ENST00000477155 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.86□□□□□ -1.31
CCDC30-209ENST00000477155 DNAJC5GQ8N7S2 189 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 DEPDC1BQ8WUY9 529 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 PRCCQ92733 491 aaPredicted RBP6.86□□□□□ -1.31
CCDC30-209ENST00000477155 PNPLA8Q9NP80 782 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 GMIPQ9P107 970 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 TSC2P49815 1807 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 RANBP2P49792 3224 aaKnown RBP6.86□□□□□ -1.31
CCDC30-209ENST00000477155 FOXO6A8MYZ6 492 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 AVILO75366 819 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 TMEM63AO94886 807 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 LRIG2O94898 1065 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 APRTP07741 180 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 HMBSP08397 361 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 ELAVL2Q12926 359 aaKnown RBP6.86□□□□□ -1.31
CCDC30-209ENST00000477155 TAF10Q12962 218 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 GPR17Q13304 367 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 BTG3Q14201 252 aaPredicted RBP6.86□□□□□ -1.31
CCDC30-209ENST00000477155 BBS9Q3SYG4 887 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 MSS51Q4VC12 460 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 HEATR6Q6AI08 1181 aaKnown RBP6.86□□□□□ -1.31
CCDC30-209ENST00000477155 ANKS3Q6ZW76 656 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 TRMT10CQ7L0Y3 403 aaKnown RBP6.86□□□□□ -1.31
CCDC30-209ENST00000477155 MIB1Q86YT6 1006 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 AUTS2Q8WXX7 1259 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 FBXO32Q969P5 355 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 TOP1MTQ969P6 601 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 FUBP3Q96I24 572 aaKnown RBP eCLIP6.86□□□□□ -1.31
CCDC30-209ENST00000477155 SLC9A7Q96T83 725 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 FAM129AQ9BZQ8 928 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 TSPYL1Q9H0U9 437 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 PRDM12Q9H4Q4 367 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 RABEP2Q9H5N1 569 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 CWH43Q9H720 699 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 TBK1Q9UHD2 729 aa6.86□□□□□ -1.31
CCDC30-209ENST00000477155 MYO7AQ13402 2215 aa6.85□□□□□ -1.31
CCDC30-209ENST00000477155 WDR27A2RRH5 827 aa6.85□□□□□ -1.31
CCDC30-209ENST00000477155 ZBBXA8MT70 800 aa6.85□□□□□ -1.31
CCDC30-209ENST00000477155 KCNK1O00180 336 aa6.85□□□□□ -1.31
CCDC30-209ENST00000477155 RASGRF2O14827 1237 aa6.85□□□□□ -1.31
CCDC30-209ENST00000477155 TRIM66O15016 1216 aa6.85□□□□□ -1.31
CCDC30-209ENST00000477155 VNN2O95498 520 aa6.85□□□□□ -1.31
CCDC30-209ENST00000477155 NUDT17P0C025 328 aa6.85□□□□□ -1.31
CCDC30-209ENST00000477155 HSPA8P11142 646 aaKnown RBP6.85□□□□□ -1.31
CCDC30-209ENST00000477155 YWHAQP27348 245 aa6.85□□□□□ -1.31
CCDC30-209ENST00000477155 CA8P35219 290 aa6.85□□□□□ -1.31
CCDC30-209ENST00000477155 NR2C2P49116 596 aa6.85□□□□□ -1.31
CCDC30-209ENST00000477155 NUMBP49757 651 aa6.85□□□□□ -1.31
CCDC30-209ENST00000477155 MAGOHP61326 146 aaKnown RBP6.85□□□□□ -1.31
CCDC30-209ENST00000477155 IFI35P80217 286 aaPredicted RBP6.85□□□□□ -1.31
CCDC30-209ENST00000477155 GABPB1Q06547 395 aaPredicted RBP6.85□□□□□ -1.31
CCDC30-209ENST00000477155 EFEMP1Q12805 493 aa6.85□□□□□ -1.31
CCDC30-209ENST00000477155 HIF1AQ16665 826 aa6.85□□□□□ -1.31
CCDC30-209ENST00000477155 USP41Q3LFD5 358 aa6.85□□□□□ -1.31
CCDC30-209ENST00000477155 CCDC38Q502W7 563 aa6.85□□□□□ -1.31
CCDC30-209ENST00000477155 SLC45A4Q5BKX6 768 aa6.85□□□□□ -1.31
CCDC30-209ENST00000477155 NECAB2Q7Z6G3 386 aa6.85□□□□□ -1.31
CCDC30-209ENST00000477155 MON1AQ86VX9 555 aa6.85□□□□□ -1.31
CCDC30-209ENST00000477155 NAT8LQ8N9F0 302 aa6.85□□□□□ -1.31
CCDC30-209ENST00000477155 TFB1MQ8WVM0 346 aaKnown RBP6.85□□□□□ -1.31
CCDC30-209ENST00000477155 PGAP3Q96FM1 320 aaPredicted RBP6.85□□□□□ -1.31
CCDC30-209ENST00000477155 IGSF21Q96ID5 467 aa6.85□□□□□ -1.31
CCDC30-209ENST00000477155 CELF6Q96J87 481 aaKnown RBP6.85□□□□□ -1.31
CCDC30-209ENST00000477155 C8orf48Q96LL4 319 aa6.85□□□□□ -1.31
CCDC30-209ENST00000477155 TMEM175Q9BSA9 504 aa6.85□□□□□ -1.31
CCDC30-209ENST00000477155 TMEM106CQ9BVX2 250 aa6.85□□□□□ -1.31
CCDC30-209ENST00000477155 VN1R3Q9BXE9 311 aa6.85□□□□□ -1.31
CCDC30-209ENST00000477155 VPS37BQ9H9H4 285 aa6.85□□□□□ -1.31
CCDC30-209ENST00000477155 ETNK1Q9HBU6 452 aa6.85□□□□□ -1.31
CCDC30-209ENST00000477155 RRN3Q9NYV6 651 aa6.85□□□□□ -1.31
CCDC30-209ENST00000477155 FARP1Q9Y4F1 1045 aaPredicted RBP6.85□□□□□ -1.31
CCDC30-209ENST00000477155 BCLAF3A2AJT9 711 aaKnown RBP6.85□□□□□ -1.31
CCDC30-209ENST00000477155 H7C4K7 107 aa6.85□□□□□ -1.31
CCDC30-209ENST00000477155 IRAK2O43187 625 aa6.85□□□□□ -1.31
CCDC30-209ENST00000477155 PAGE1O75459 146 aa6.85□□□□□ -1.31
CCDC30-209ENST00000477155 CAPN15O75808 1086 aa6.85□□□□□ -1.31
CCDC30-209ENST00000477155 METTL18O95568 372 aa6.85□□□□□ -1.31
CCDC30-209ENST00000477155 TIMP1P01033 207 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms