RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 GRK7Q8WTQ7 553 aa14.97□□□□□ -0.01
COL4A6-206ENST00000477085 P3H4Q92791 437 aa14.97□□□□□ -0.01
COL4A6-206ENST00000477085 CAVIN3Q969G5 261 aa14.97□□□□□ -0.01
COL4A6-206ENST00000477085 SLC39A13Q96H72 371 aa14.97□□□□□ -0.01
COL4A6-206ENST00000477085 CEP295NLQ96MC4 621 aa14.97□□□□□ -0.01
COL4A6-206ENST00000477085 C17orf80Q9BSJ5 609 aa14.97□□□□□ -0.01
COL4A6-206ENST00000477085 HTATIP2Q9BUP3 242 aa14.97□□□□□ -0.01
COL4A6-206ENST00000477085 FRMD8P1Q9BZ68 369 aaPredicted RBP14.97□□□□□ -0.01
COL4A6-206ENST00000477085 CCSER2Q9H7U1 834 aa14.97□□□□□ -0.01
COL4A6-206ENST00000477085 TLR8Q9NR97 1041 aaKnown RBP14.97□□□□□ -0.01
COL4A6-206ENST00000477085 FAM114A2Q9NRY5 505 aa14.97□□□□□ -0.01
COL4A6-206ENST00000477085 RCOR3Q9P2K3 495 aaPredicted RBP14.97□□□□□ -0.01
COL4A6-206ENST00000477085 NEU3Q9UQ49 428 aa14.97□□□□□ -0.01
COL4A6-206ENST00000477085 RANBP2P49792 3224 aaKnown RBP14.97□□□□□ -0.01
COL4A6-206ENST00000477085 CXCL14O95715 111 aa14.96□□□□□ -0.01
COL4A6-206ENST00000477085 KRT14P02533 472 aa14.96□□□□□ -0.01
COL4A6-206ENST00000477085 RBP3P10745 1247 aa14.96□□□□□ -0.01
COL4A6-206ENST00000477085 VPS41P49754 854 aa14.96□□□□□ -0.01
COL4A6-206ENST00000477085 HLTFQ14527 1009 aaKnown RBP eCLIP14.96□□□□□ -0.01
COL4A6-206ENST00000477085 RFX8Q6ZV50 586 aa14.96□□□□□ -0.01
COL4A6-206ENST00000477085 MTERF4Q7Z6M4 381 aaKnown RBP14.96□□□□□ -0.01
COL4A6-206ENST00000477085 TP53INP2Q8IXH6 220 aa14.96□□□□□ -0.01
COL4A6-206ENST00000477085 TCEAL8Q8IYN2 117 aa14.96□□□□□ -0.01
COL4A6-206ENST00000477085 TSEN2Q8NCE0 465 aaKnown RBP14.96□□□□□ -0.01
COL4A6-206ENST00000477085 FBXO25Q8TCJ0 367 aa14.96□□□□□ -0.01
COL4A6-206ENST00000477085 ZBTB9Q96C00 473 aa14.96□□□□□ -0.01
COL4A6-206ENST00000477085 FCRL2Q96LA5 508 aaPredicted RBP14.96□□□□□ -0.01
COL4A6-206ENST00000477085 LBHD1Q9BQE6 289 aaPredicted RBP14.96□□□□□ -0.01
COL4A6-206ENST00000477085 UBE2OQ9C0C9 1292 aaKnown RBP14.96□□□□□ -0.01
COL4A6-206ENST00000477085 USP29Q9HBJ7 922 aa14.96□□□□□ -0.01
COL4A6-206ENST00000477085 DTLQ9NZJ0 730 aa14.96□□□□□ -0.01
COL4A6-206ENST00000477085 OR12D3Q9UGF7 316 aa14.96□□□□□ -0.01
COL4A6-206ENST00000477085 PLXNA4Q9HCM2 1894 aa14.96□□□□□ -0.01
COL4A6-206ENST00000477085 HIDE1A8MVS5 230 aa14.96□□□□□ -0.02
COL4A6-206ENST00000477085 DCLK1O15075 740 aa14.96□□□□□ -0.02
COL4A6-206ENST00000477085 TGM5O43548 720 aa14.96□□□□□ -0.02
COL4A6-206ENST00000477085 GAS8O95995 478 aa14.96□□□□□ -0.02
COL4A6-206ENST00000477085 ARL4AP40617 200 aa14.96□□□□□ -0.02
COL4A6-206ENST00000477085 PLTPP55058 493 aa14.96□□□□□ -0.02
COL4A6-206ENST00000477085 TWF1Q12792 350 aa14.96□□□□□ -0.02
COL4A6-206ENST00000477085 EFEMP1Q12805 493 aa14.96□□□□□ -0.02
COL4A6-206ENST00000477085 CASP8Q14790 479 aa14.96□□□□□ -0.02
COL4A6-206ENST00000477085 ARL13BQ3SXY8 428 aa14.96□□□□□ -0.02
COL4A6-206ENST00000477085 MAP9Q49MG5 647 aa14.96□□□□□ -0.02
COL4A6-206ENST00000477085 EMBQ6PCB8 327 aa14.96□□□□□ -0.02
COL4A6-206ENST00000477085 LILRA6Q6PI73 481 aa14.96□□□□□ -0.02
COL4A6-206ENST00000477085 GSTA5Q7RTV2 222 aa14.96□□□□□ -0.02
COL4A6-206ENST00000477085 SPPL3Q8TCT6 385 aa14.96□□□□□ -0.02
COL4A6-206ENST00000477085 ART4Q93070 314 aa14.96□□□□□ -0.02
COL4A6-206ENST00000477085 RNF34Q969K3 372 aa14.96□□□□□ -0.02
COL4A6-206ENST00000477085 MYRFLQ96LU7 910 aa14.96□□□□□ -0.02
COL4A6-206ENST00000477085 OSBPL2Q9H1P3 480 aa14.96□□□□□ -0.02
COL4A6-206ENST00000477085 ADAM7Q9H2U9 754 aa14.96□□□□□ -0.02
COL4A6-206ENST00000477085 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.96□□□□□ -0.02
COL4A6-206ENST00000477085 ASIC3Q9UHC3 531 aa14.96□□□□□ -0.02
COL4A6-206ENST00000477085 TLR6Q9Y2C9 796 aa14.96□□□□□ -0.02
COL4A6-206ENST00000477085 ZNF638Q14966 1978 aaKnown RBP14.95□□□□□ -0.02
COL4A6-206ENST00000477085 ZNF840PA6NDX5 716 aa14.95□□□□□ -0.02
COL4A6-206ENST00000477085 H3BRJ5 948 aa14.95□□□□□ -0.02
COL4A6-206ENST00000477085 EEF2KO00418 725 aaKnown RBP14.95□□□□□ -0.02
COL4A6-206ENST00000477085 PAGE1O75459 146 aa14.95□□□□□ -0.02
COL4A6-206ENST00000477085 LRIG2O94898 1065 aa14.95□□□□□ -0.02
COL4A6-206ENST00000477085 CSPG5O95196 566 aa14.95□□□□□ -0.02
COL4A6-206ENST00000477085 CCR1P32246 355 aa14.95□□□□□ -0.02
COL4A6-206ENST00000477085 CTNNB1P35222 781 aa14.95□□□□□ -0.02
COL4A6-206ENST00000477085 HCAR3P49019 387 aa14.95□□□□□ -0.02
COL4A6-206ENST00000477085 PSEN1P49768 467 aa14.95□□□□□ -0.02
COL4A6-206ENST00000477085 LMNB2Q03252 620 aa14.95□□□□□ -0.02
COL4A6-206ENST00000477085 CAMK1Q14012 370 aa14.95□□□□□ -0.02
COL4A6-206ENST00000477085 PPP2R5DQ14738 602 aa14.95□□□□□ -0.02
COL4A6-206ENST00000477085 BRMS1LQ5PSV4 323 aa14.95□□□□□ -0.02
COL4A6-206ENST00000477085 SNX30Q5VWJ9 437 aa14.95□□□□□ -0.02
COL4A6-206ENST00000477085 TMC7Q7Z402 723 aa14.95□□□□□ -0.02
COL4A6-206ENST00000477085 FAM71DQ8N9W8 422 aa14.95□□□□□ -0.02
COL4A6-206ENST00000477085 SERPINB11Q96P15 392 aa14.95□□□□□ -0.02
COL4A6-206ENST00000477085 KLHL5Q96PQ7 755 aa14.95□□□□□ -0.02
COL4A6-206ENST00000477085 HAPLN3Q96S86 360 aa14.95□□□□□ -0.02
COL4A6-206ENST00000477085 TCF25Q9BQ70 676 aa14.95□□□□□ -0.02
COL4A6-206ENST00000477085 SGK1O00141 431 aa14.94□□□□□ -0.02
COL4A6-206ENST00000477085 MCF2LO15068 1137 aa14.94□□□□□ -0.02
COL4A6-206ENST00000477085 RRP9O43818 475 aaKnown RBP14.94□□□□□ -0.02
COL4A6-206ENST00000477085 MFSD11O43934 449 aa14.94□□□□□ -0.02
COL4A6-206ENST00000477085 ERCC2P18074 760 aa14.94□□□□□ -0.02
COL4A6-206ENST00000477085 ADCY8P40145 1251 aa14.94□□□□□ -0.02
COL4A6-206ENST00000477085 ALDH1A3P47895 512 aa14.94□□□□□ -0.02
COL4A6-206ENST00000477085 SHHQ15465 462 aa14.94□□□□□ -0.02
COL4A6-206ENST00000477085 C10orf120Q5SQS8 335 aa14.94□□□□□ -0.02
COL4A6-206ENST00000477085 RHBDF2Q6PJF5 856 aa14.94□□□□□ -0.02
COL4A6-206ENST00000477085 HDXQ7Z353 690 aa14.94□□□□□ -0.02
COL4A6-206ENST00000477085 DNAJB7Q7Z6W7 309 aaPredicted RBP14.94□□□□□ -0.02
COL4A6-206ENST00000477085 C14orf80Q86SX3 495 aa14.94□□□□□ -0.02
COL4A6-206ENST00000477085 TMEM150AQ86TG1 271 aa14.94□□□□□ -0.02
COL4A6-206ENST00000477085 MIB1Q86YT6 1006 aa14.94□□□□□ -0.02
COL4A6-206ENST00000477085 OLFM3Q96PB7 478 aa14.94□□□□□ -0.02
COL4A6-206ENST00000477085 SIK2Q9H0K1 926 aa14.94□□□□□ -0.02
COL4A6-206ENST00000477085 WHRNQ9P202 907 aa14.94□□□□□ -0.02
COL4A6-206ENST00000477085 STK39Q9UEW8 545 aa14.94□□□□□ -0.02
COL4A6-206ENST00000477085 INSL5Q9Y5Q6 135 aa14.94□□□□□ -0.02
COL4A6-206ENST00000477085 NR2E3Q9Y5X4 410 aa14.94□□□□□ -0.02
COL4A6-206ENST00000477085 HS3ST4Q9Y661 456 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms