RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 MTG2Q9H4K7 406 aa16.13■□□□□ 0.17
SMG5-204ENST00000476954 SGK2Q9HBY8 427 aa16.13■□□□□ 0.17
SMG5-204ENST00000476954 DMAP1Q9NPF5 467 aaPredicted RBP16.13■□□□□ 0.17
SMG5-204ENST00000476954 CYLDQ9NQC7 956 aa16.13■□□□□ 0.17
SMG5-204ENST00000476954 PRSS16Q9NQE7 514 aa16.13■□□□□ 0.17
SMG5-204ENST00000476954 SERGEFQ9UGK8 458 aa16.13■□□□□ 0.17
SMG5-204ENST00000476954 DOCK9Q9BZ29 2069 aa16.13■□□□□ 0.17
SMG5-204ENST00000476954 TDRD6O60522 2096 aaKnown RBP16.12■□□□□ 0.17
SMG5-204ENST00000476954 A0A1W2PNU3 283 aaPredicted RBP16.12■□□□□ 0.17
SMG5-204ENST00000476954 CYP26A1O43174 497 aa16.12■□□□□ 0.17
SMG5-204ENST00000476954 SIGLEC6O43699 453 aa16.12■□□□□ 0.17
SMG5-204ENST00000476954 SDC3O75056 442 aa16.12■□□□□ 0.17
SMG5-204ENST00000476954 LDHAP00338 332 aaKnown RBP16.12■□□□□ 0.17
SMG5-204ENST00000476954 DNTTP04053 509 aa16.12■□□□□ 0.17
SMG5-204ENST00000476954 C7P10643 843 aa16.12■□□□□ 0.17
SMG5-204ENST00000476954 LSSP48449 732 aa16.12■□□□□ 0.17
SMG5-204ENST00000476954 ARRB1P49407 418 aaPredicted RBP16.12■□□□□ 0.17
SMG5-204ENST00000476954 CASP5P51878 434 aa16.12■□□□□ 0.17
SMG5-204ENST00000476954 GALCP54803 685 aa16.12■□□□□ 0.17
SMG5-204ENST00000476954 NXPH1P58417 271 aa16.12■□□□□ 0.17
SMG5-204ENST00000476954 GOLGA8FQ08AF8 430 aa16.12■□□□□ 0.17
SMG5-204ENST00000476954 GOLGA8DPQ0D2H9 430 aa16.12■□□□□ 0.17
SMG5-204ENST00000476954 EIF4HQ15056 248 aaKnown RBP16.12■□□□□ 0.17
SMG5-204ENST00000476954 FNDC3BQ53EP0 1204 aaKnown RBP16.12■□□□□ 0.17
SMG5-204ENST00000476954 CDCP2Q5VXM1 449 aa16.12■□□□□ 0.17
SMG5-204ENST00000476954 NCEH1Q6PIU2 408 aa16.12■□□□□ 0.17
SMG5-204ENST00000476954 DYMQ7RTS9 669 aa16.12■□□□□ 0.17
SMG5-204ENST00000476954 GPRIN1Q7Z2K8 1008 aa16.12■□□□□ 0.17
SMG5-204ENST00000476954 SPATS2Q86XZ4 545 aaKnown RBP16.12■□□□□ 0.17
SMG5-204ENST00000476954 LSMEM2Q8N112 164 aa16.12■□□□□ 0.17
SMG5-204ENST00000476954 HVCN1Q96D96 273 aa16.12■□□□□ 0.17
SMG5-204ENST00000476954 FGFBP2Q9BYJ0 223 aa16.12■□□□□ 0.17
SMG5-204ENST00000476954 GZF1Q9H116 711 aaPredicted RBP16.12■□□□□ 0.17
SMG5-204ENST00000476954 TMEM245Q9H330 911 aa16.12■□□□□ 0.17
SMG5-204ENST00000476954 CAAP1Q9H8G2 361 aa16.12■□□□□ 0.17
SMG5-204ENST00000476954 POLR1BQ9H9Y6 1135 aa16.12■□□□□ 0.17
SMG5-204ENST00000476954 TLR8Q9NR97 1041 aaKnown RBP16.12■□□□□ 0.17
SMG5-204ENST00000476954 KRT82Q9NSB4 513 aa16.12■□□□□ 0.17
SMG5-204ENST00000476954 SPTBN1Q01082 2364 aaKnown RBP16.11■□□□□ 0.17
SMG5-204ENST00000476954 YKT6O15498 198 aa16.11■□□□□ 0.17
SMG5-204ENST00000476954 SUV39H1O43463 412 aa16.11■□□□□ 0.17
SMG5-204ENST00000476954 CSO75390 466 aaKnown RBP16.11■□□□□ 0.17
SMG5-204ENST00000476954 AP1G2O75843 785 aa16.11■□□□□ 0.17
SMG5-204ENST00000476954 GARTP22102 1010 aa16.11■□□□□ 0.17
SMG5-204ENST00000476954 E2F1Q01094 437 aa16.11■□□□□ 0.17
SMG5-204ENST00000476954 ARID5AQ03989 594 aa16.11■□□□□ 0.17
SMG5-204ENST00000476954 UBAP2LQ14157 1087 aaKnown RBP16.11■□□□□ 0.17
SMG5-204ENST00000476954 WDR72Q3MJ13 1102 aa16.11■□□□□ 0.17
SMG5-204ENST00000476954 L1TD1Q5T7N2 865 aaKnown RBP16.11■□□□□ 0.17
SMG5-204ENST00000476954 TRAPPC11Q7Z392 1133 aa16.11■□□□□ 0.17
SMG5-204ENST00000476954 CBWD2Q8IUF1 395 aa16.11■□□□□ 0.17
SMG5-204ENST00000476954 FUKQ8N0W3 1084 aa16.11■□□□□ 0.17
SMG5-204ENST00000476954 GANCQ8TET4 914 aa16.11■□□□□ 0.17
SMG5-204ENST00000476954 ACCSQ96QU6 501 aa16.11■□□□□ 0.17
SMG5-204ENST00000476954 STARD5Q9NSY2 213 aa16.11■□□□□ 0.17
SMG5-204ENST00000476954 COL27A1Q8IZC6 1860 aaPredicted RBP16.11■□□□□ 0.17
SMG5-204ENST00000476954 A0A1W2PQH9 124 aa16.1■□□□□ 0.17
SMG5-204ENST00000476954 PMS2P1A4D2B8 440 aa16.1■□□□□ 0.17
SMG5-204ENST00000476954 OPA1O60313 960 aa16.1■□□□□ 0.17
SMG5-204ENST00000476954 PRPF6O94906 941 aaKnown RBP16.1■□□□□ 0.17
SMG5-204ENST00000476954 HMBSP08397 361 aa16.1■□□□□ 0.17
SMG5-204ENST00000476954 RARGP13631 454 aa16.1■□□□□ 0.17
SMG5-204ENST00000476954 CCDC130P13994 396 aa16.1■□□□□ 0.17
SMG5-204ENST00000476954 ITGB6P18564 788 aa16.1■□□□□ 0.17
SMG5-204ENST00000476954 PLA2G4AP47712 749 aa16.1■□□□□ 0.17
SMG5-204ENST00000476954 RXRGP48443 463 aa16.1■□□□□ 0.17
SMG5-204ENST00000476954 GRIN1Q05586 938 aa16.1■□□□□ 0.17
SMG5-204ENST00000476954 DUOXA2Q1HG44 320 aa16.1■□□□□ 0.17
SMG5-204ENST00000476954 C10orf120Q5SQS8 335 aa16.1■□□□□ 0.17
SMG5-204ENST00000476954 CCDC81Q6ZN84 652 aa16.1■□□□□ 0.17
SMG5-204ENST00000476954 ZC3H3Q8IXZ2 948 aaKnown RBP16.1■□□□□ 0.17
SMG5-204ENST00000476954 GPD1LQ8N335 351 aa16.1■□□□□ 0.17
SMG5-204ENST00000476954 JAKMIP2Q96AA8 810 aa16.1■□□□□ 0.17
SMG5-204ENST00000476954 SKA1Q96BD8 255 aa16.1■□□□□ 0.17
SMG5-204ENST00000476954 ELMO3Q96BJ8 720 aa16.1■□□□□ 0.17
SMG5-204ENST00000476954 CALML4Q96GE6 196 aa16.1■□□□□ 0.17
SMG5-204ENST00000476954 SMARCD1Q96GM5 515 aa16.1■□□□□ 0.17
SMG5-204ENST00000476954 MRPL44Q9H9J2 332 aaKnown RBP16.1■□□□□ 0.17
SMG5-204ENST00000476954 THSD1Q9NS62 852 aa16.1■□□□□ 0.17
SMG5-204ENST00000476954 COMMD8Q9NX08 183 aa16.1■□□□□ 0.17
SMG5-204ENST00000476954 EXOC7Q9UPT5 735 aa16.1■□□□□ 0.17
SMG5-204ENST00000476954 ATP8B3O60423 1300 aa16.1■□□□□ 0.17
SMG5-204ENST00000476954 ABCA12Q86UK0 2595 aa16.09■□□□□ 0.17
SMG5-204ENST00000476954 TLR4O00206 839 aa16.09■□□□□ 0.17
SMG5-204ENST00000476954 EFSO43281 561 aa16.09■□□□□ 0.17
SMG5-204ENST00000476954 MAP3K7CLP57077 242 aa16.09■□□□□ 0.17
SMG5-204ENST00000476954 TNNC1P63316 161 aa16.09■□□□□ 0.17
SMG5-204ENST00000476954 DAB2P98082 770 aa16.09■□□□□ 0.17
SMG5-204ENST00000476954 ZBTB16Q05516 673 aa16.09■□□□□ 0.17
SMG5-204ENST00000476954 TTC31Q49AM3 519 aaPredicted RBP16.09■□□□□ 0.17
SMG5-204ENST00000476954 HIST2H2BCQ6DN03 193 aa16.09■□□□□ 0.17
SMG5-204ENST00000476954 SYCP3Q8IZU3 236 aa16.09■□□□□ 0.17
SMG5-204ENST00000476954 OSBPL2Q9H1P3 480 aa16.09■□□□□ 0.17
SMG5-204ENST00000476954 SMYD3Q9H7B4 428 aa16.09■□□□□ 0.17
SMG5-204ENST00000476954 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.09■□□□□ 0.17
SMG5-204ENST00000476954 FBXL12Q9NXK8 326 aa16.09■□□□□ 0.17
SMG5-204ENST00000476954 KCNK4Q9NYG8 393 aa16.09■□□□□ 0.17
SMG5-204ENST00000476954 GCNT3O95395 438 aa16.08■□□□□ 0.16
SMG5-204ENST00000476954 AFPP02771 609 aaKnown RBP16.08■□□□□ 0.16
SMG5-204ENST00000476954 CR2P20023 1033 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms