RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 ARL4AP40617 200 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 MATKP42679 507 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 ACLYP53396 1101 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 SLC8A3P57103 927 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 CDK16Q00536 496 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 HEATR6Q6AI08 1181 aaKnown RBP17■□□□□ 0.31
TMEM53-208ENST00000476724 NLRP9Q7RTR0 991 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 RNF180Q86T96 592 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 PRPF39Q86UA1 669 aaKnown RBP17■□□□□ 0.31
TMEM53-208ENST00000476724 RPAINQ86UA6 219 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 RSPH3Q86UC2 560 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 TRIM42Q8IWZ5 723 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 CTAGE3PQ8IX95 158 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 KIF2BQ8N4N8 673 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 PPM1NQ8N819 430 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 PCSK9Q8NBP7 692 aaKnown RBP17■□□□□ 0.31
TMEM53-208ENST00000476724 THOC1Q96FV9 657 aaKnown RBP17■□□□□ 0.31
TMEM53-208ENST00000476724 TUBB6Q9BUF5 446 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 TSSK1BQ9BXA7 367 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 AGO3Q9H9G7 860 aaKnown RBP17■□□□□ 0.31
TMEM53-208ENST00000476724 WDR91A4D1P6 747 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 MEIS3P2A8K0S8 358 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 COPEO14579 308 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 CCND1P24385 295 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 LMO2P25791 158 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 FDFT1P37268 417 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 THPOP40225 353 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 GBE1Q04446 702 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 SLC10A2Q12908 348 aaPredicted RBP17■□□□□ 0.31
TMEM53-208ENST00000476724 SEMA5AQ13591 1074 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 ITGA7Q13683 1181 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 SYCP2LQ5T4T6 812 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 FAXCQ5TGI0 409 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 KCNT2Q6UVM3 1135 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 TOP6BLQ8N6T0 577 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 GSDMBQ8TAX9 411 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 CLEC4CQ8WTT0 213 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 SIGLEC10Q96LC7 697 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 KCTD15Q96SI1 283 aaPredicted RBP17■□□□□ 0.31
TMEM53-208ENST00000476724 EBNA1BP2Q99848 306 aaKnown RBP17■□□□□ 0.31
TMEM53-208ENST00000476724 FERMT1Q9BQL6 677 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 NPHS2Q9NP85 383 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 MKS1Q9NXB0 559 aa17■□□□□ 0.31
TMEM53-208ENST00000476724 TRIM49D1C9J1S8 452 aa16.99■□□□□ 0.31
TMEM53-208ENST00000476724 HGSO14964 777 aaPredicted RBP16.99■□□□□ 0.31
TMEM53-208ENST00000476724 FKTNO75072 461 aa16.99■□□□□ 0.31
TMEM53-208ENST00000476724 METTL18O95568 372 aa16.99■□□□□ 0.31
TMEM53-208ENST00000476724 WARSP23381 471 aaKnown RBP16.99■□□□□ 0.31
TMEM53-208ENST00000476724 SERPINB9P50453 376 aa16.99■□□□□ 0.31
TMEM53-208ENST00000476724 SLC25A52Q3SY17 297 aa16.99■□□□□ 0.31
TMEM53-208ENST00000476724 LHX8Q68G74 356 aa16.99■□□□□ 0.31
TMEM53-208ENST00000476724 TFB1MQ8WVM0 346 aaKnown RBP16.99■□□□□ 0.31
TMEM53-208ENST00000476724 HNRNPABQ99729 332 aaKnown RBP16.99■□□□□ 0.31
TMEM53-208ENST00000476724 LPIN3Q9BQK8 851 aa16.99■□□□□ 0.31
TMEM53-208ENST00000476724 GOLGA2P5Q9HBQ8 144 aa16.99■□□□□ 0.31
TMEM53-208ENST00000476724 ZFP69BQ9UJL9 534 aa16.99■□□□□ 0.31
TMEM53-208ENST00000476724 TRAFD1O14545 582 aaPredicted RBP16.98■□□□□ 0.31
TMEM53-208ENST00000476724 ZNF189O75820 626 aaPredicted RBP16.98■□□□□ 0.31
TMEM53-208ENST00000476724 DGKIO75912 1065 aa16.98■□□□□ 0.31
TMEM53-208ENST00000476724 WFS1O76024 890 aa16.98■□□□□ 0.31
TMEM53-208ENST00000476724 NEFHP12036 1026 aa16.98■□□□□ 0.31
TMEM53-208ENST00000476724 MLNP12872 115 aa16.98■□□□□ 0.31
TMEM53-208ENST00000476724 SOX4Q06945 474 aaPredicted RBP16.98■□□□□ 0.31
TMEM53-208ENST00000476724 PRKD1Q15139 912 aaPredicted RBP16.98■□□□□ 0.31
TMEM53-208ENST00000476724 NCBP2-AS2Q69YL0 99 aa16.98■□□□□ 0.31
TMEM53-208ENST00000476724 SLC2A14Q8TDB8 520 aa16.98■□□□□ 0.31
TMEM53-208ENST00000476724 FAM111AQ96PZ2 611 aa16.98■□□□□ 0.31
TMEM53-208ENST00000476724 FZD10Q9ULW2 581 aa16.98■□□□□ 0.31
TMEM53-208ENST00000476724 STK38LQ9Y2H1 464 aa16.98■□□□□ 0.31
TMEM53-208ENST00000476724 MTO1Q9Y2Z2 717 aaKnown RBP16.98■□□□□ 0.31
TMEM53-208ENST00000476724 FAM159BA6NKW6 160 aa16.98■□□□□ 0.31
TMEM53-208ENST00000476724 SPTLC1O15269 473 aa16.98■□□□□ 0.31
TMEM53-208ENST00000476724 MAP3K6O95382 1288 aa16.98■□□□□ 0.31
TMEM53-208ENST00000476724 GNRH1P01148 92 aa16.98■□□□□ 0.31
TMEM53-208ENST00000476724 CNTFP26441 200 aa16.98■□□□□ 0.31
TMEM53-208ENST00000476724 CCNFP41002 786 aa16.98■□□□□ 0.31
TMEM53-208ENST00000476724 UNC5AQ6ZN44 842 aa16.98■□□□□ 0.31
TMEM53-208ENST00000476724 ADGRF2Q8IZF7 708 aa16.98■□□□□ 0.31
TMEM53-208ENST00000476724 CCDC185Q8N715 623 aa16.98■□□□□ 0.31
TMEM53-208ENST00000476724 HTR3CQ8WXA8 447 aa16.98■□□□□ 0.31
TMEM53-208ENST00000476724 SRPK1Q96SB4 655 aaKnown RBP16.98■□□□□ 0.31
TMEM53-208ENST00000476724 DUSP16Q9BY84 665 aa16.98■□□□□ 0.31
TMEM53-208ENST00000476724 DTLQ9NZJ0 730 aa16.98■□□□□ 0.31
TMEM53-208ENST00000476724 TRIM33Q9UPN9 1127 aa16.98■□□□□ 0.31
TMEM53-208ENST00000476724 PCDHA11Q9Y5I1 949 aa16.98■□□□□ 0.31
TMEM53-208ENST00000476724 USP3Q9Y6I4 520 aa16.98■□□□□ 0.31
TMEM53-208ENST00000476724 DAB1O75553 588 aa16.97■□□□□ 0.31
TMEM53-208ENST00000476724 STK10O94804 968 aaKnown RBP16.97■□□□□ 0.31
TMEM53-208ENST00000476724 SERPINB4P48594 390 aa16.97■□□□□ 0.31
TMEM53-208ENST00000476724 ATXN1P54253 815 aaKnown RBP16.97■□□□□ 0.31
TMEM53-208ENST00000476724 ZNF534Q76KX8 674 aa16.97■□□□□ 0.31
TMEM53-208ENST00000476724 CCNJLQ8IV13 435 aa16.97■□□□□ 0.31
TMEM53-208ENST00000476724 KCTD13Q8WZ19 329 aa16.97■□□□□ 0.31
TMEM53-208ENST00000476724 TTC17Q96AE7 1141 aa16.97■□□□□ 0.31
TMEM53-208ENST00000476724 ZFP42Q96MM3 310 aa16.97■□□□□ 0.31
TMEM53-208ENST00000476724 OLFM3Q96PB7 478 aa16.97■□□□□ 0.31
TMEM53-208ENST00000476724 PLAC1Q9HBJ0 212 aa16.97■□□□□ 0.31
TMEM53-208ENST00000476724 LNPEPQ9UIQ6 1025 aa16.97■□□□□ 0.31
TMEM53-208ENST00000476724 PLLPQ9Y342 182 aa16.97■□□□□ 0.31
TMEM53-208ENST00000476724 PTCH2Q9Y6C5 1203 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms