RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 DUSP16Q9BY84 665 aa12.54□□□□□ -0.4
HDAC6-219ENST00000476625 ZDHHC5Q9C0B5 715 aa12.54□□□□□ -0.4
HDAC6-219ENST00000476625 LHX5Q9H2C1 402 aa12.54□□□□□ -0.4
HDAC6-219ENST00000476625 CAAP1Q9H8G2 361 aa12.54□□□□□ -0.4
HDAC6-219ENST00000476625 SERGEFQ9UGK8 458 aa12.54□□□□□ -0.4
HDAC6-219ENST00000476625 SFMBT1Q9UHJ3 866 aa12.54□□□□□ -0.4
HDAC6-219ENST00000476625 PCDHA7Q9UN72 937 aa12.54□□□□□ -0.4
HDAC6-219ENST00000476625 MAPK8IP1Q9UQF2 711 aa12.54□□□□□ -0.4
HDAC6-219ENST00000476625 ANKRD6Q9Y2G4 727 aa12.54□□□□□ -0.4
HDAC6-219ENST00000476625 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.54□□□□□ -0.4
HDAC6-219ENST00000476625 USP3Q9Y6I4 520 aa12.54□□□□□ -0.4
HDAC6-219ENST00000476625 ANKRD11Q6UB99 2663 aaPredicted RBP12.54□□□□□ -0.4
HDAC6-219ENST00000476625 FASNP49327 2511 aaKnown RBP12.53□□□□□ -0.4
HDAC6-219ENST00000476625 GCN1Q92616 2671 aaKnown RBP12.53□□□□□ -0.4
HDAC6-219ENST00000476625 GOLGA6L7A0A1B0GV03 622 aa12.53□□□□□ -0.4
HDAC6-219ENST00000476625 WNT9AO14904 365 aa12.53□□□□□ -0.4
HDAC6-219ENST00000476625 FLRT2O43155 660 aa12.53□□□□□ -0.4
HDAC6-219ENST00000476625 ACTN4O43707 911 aaKnown RBP12.53□□□□□ -0.4
HDAC6-219ENST00000476625 ZNF883P0CG24 379 aa12.53□□□□□ -0.4
HDAC6-219ENST00000476625 RALAP11233 206 aa12.53□□□□□ -0.4
HDAC6-219ENST00000476625 RPS14P62263 151 aaKnown RBP12.53□□□□□ -0.4
HDAC6-219ENST00000476625 SNRPFP62306 86 aaKnown RBP12.53□□□□□ -0.4
HDAC6-219ENST00000476625 PTPRNQ16849 979 aa12.53□□□□□ -0.4
HDAC6-219ENST00000476625 FNDC3BQ53EP0 1204 aaKnown RBP12.53□□□□□ -0.4
HDAC6-219ENST00000476625 CHST9Q7L1S5 443 aa12.53□□□□□ -0.4
HDAC6-219ENST00000476625 PIGZQ86VD9 579 aa12.53□□□□□ -0.4
HDAC6-219ENST00000476625 OR2T3Q8NH03 318 aa12.53□□□□□ -0.4
HDAC6-219ENST00000476625 EDEM1Q92611 657 aa12.53□□□□□ -0.4
HDAC6-219ENST00000476625 MYEOVQ96EZ4 313 aa12.53□□□□□ -0.4
HDAC6-219ENST00000476625 EEF2KMTQ96G04 330 aa12.53□□□□□ -0.4
HDAC6-219ENST00000476625 PAGE5Q96GU1 130 aa12.53□□□□□ -0.4
HDAC6-219ENST00000476625 SLC6A18Q96N87 628 aa12.53□□□□□ -0.4
HDAC6-219ENST00000476625 NT5C1AQ9BXI3 368 aa12.53□□□□□ -0.4
HDAC6-219ENST00000476625 BACH2Q9BYV9 841 aa12.53□□□□□ -0.4
HDAC6-219ENST00000476625 ULBP1Q9BZM6 244 aa12.53□□□□□ -0.4
HDAC6-219ENST00000476625 ZSCAN16Q9H4T2 348 aaPredicted RBP12.53□□□□□ -0.4
HDAC6-219ENST00000476625 EBF2Q9HAK2 575 aa12.53□□□□□ -0.4
HDAC6-219ENST00000476625 MARCH2Q9P0N8 246 aa12.53□□□□□ -0.4
HDAC6-219ENST00000476625 KIAA1522Q9P206 1035 aaPredicted RBP12.53□□□□□ -0.4
HDAC6-219ENST00000476625 COL5A1P20908 1838 aaPredicted RBP12.53□□□□□ -0.4
HDAC6-219ENST00000476625 DOCK9Q9BZ29 2069 aa12.52□□□□□ -0.4
HDAC6-219ENST00000476625 PVALEFA0A1B0GWK0 134 aa12.52□□□□□ -0.41
HDAC6-219ENST00000476625 FAM47DPA6NHR8 397 aa12.52□□□□□ -0.41
HDAC6-219ENST00000476625 PIK3R2O00459 728 aa12.52□□□□□ -0.41
HDAC6-219ENST00000476625 TLX3O43711 291 aaPredicted RBP12.52□□□□□ -0.41
HDAC6-219ENST00000476625 YEATS4O95619 227 aa12.52□□□□□ -0.41
HDAC6-219ENST00000476625 SEMA4FO95754 770 aa12.52□□□□□ -0.41
HDAC6-219ENST00000476625 CALCAP01258 141 aa12.52□□□□□ -0.41
HDAC6-219ENST00000476625 WNT1P04628 370 aa12.52□□□□□ -0.41
HDAC6-219ENST00000476625 IGHV4-34P06331 123 aa12.52□□□□□ -0.41
HDAC6-219ENST00000476625 P4HA1P13674 534 aa12.52□□□□□ -0.41
HDAC6-219ENST00000476625 OXTRP30559 389 aa12.52□□□□□ -0.41
HDAC6-219ENST00000476625 CD70P32970 193 aa12.52□□□□□ -0.41
HDAC6-219ENST00000476625 VAMP7P51809 220 aa12.52□□□□□ -0.41
HDAC6-219ENST00000476625 AP3M2P53677 418 aa12.52□□□□□ -0.41
HDAC6-219ENST00000476625 YWHAGP61981 247 aaKnown RBP eCLIP12.52□□□□□ -0.41
HDAC6-219ENST00000476625 CAMK2GQ13555 558 aaPredicted RBP12.52□□□□□ -0.41
HDAC6-219ENST00000476625 PKP1Q13835 747 aa12.52□□□□□ -0.41
HDAC6-219ENST00000476625 RESP18Q5W5W9 173 aa12.52□□□□□ -0.41
HDAC6-219ENST00000476625 RSRC2Q7L4I2 434 aaKnown RBP12.52□□□□□ -0.41
HDAC6-219ENST00000476625 ADIPOR2Q86V24 386 aa12.52□□□□□ -0.41
HDAC6-219ENST00000476625 SLC4A11Q8NBS3 891 aa12.52□□□□□ -0.41
HDAC6-219ENST00000476625 TMC2Q8TDI7 906 aa12.52□□□□□ -0.41
HDAC6-219ENST00000476625 UCMAQ8WVF2 138 aa12.52□□□□□ -0.41
HDAC6-219ENST00000476625 HEXIM2Q96MH2 286 aaKnown RBP12.52□□□□□ -0.41
HDAC6-219ENST00000476625 NIF3L1Q9GZT8 377 aa12.52□□□□□ -0.41
HDAC6-219ENST00000476625 TMEM245Q9H330 911 aa12.52□□□□□ -0.41
HDAC6-219ENST00000476625 UPF2Q9HAU5 1272 aaKnown RBP12.52□□□□□ -0.41
HDAC6-219ENST00000476625 SCUBE2Q9NQ36 999 aa12.52□□□□□ -0.41
HDAC6-219ENST00000476625 PRSS16Q9NQE7 514 aa12.52□□□□□ -0.41
HDAC6-219ENST00000476625 ABCB8Q9NUT2 735 aa12.52□□□□□ -0.41
HDAC6-219ENST00000476625 CLIC5Q9NZA1 410 aa12.52□□□□□ -0.41
HDAC6-219ENST00000476625 CGNQ9P2M7 1197 aaKnown RBP12.52□□□□□ -0.41
HDAC6-219ENST00000476625 RAI2Q9Y5P3 530 aa12.52□□□□□ -0.41
HDAC6-219ENST00000476625 RPN1P04843 607 aaKnown RBP12.51□□□□□ -0.41
HDAC6-219ENST00000476625 PDIA4P13667 645 aaKnown RBP12.51□□□□□ -0.41
HDAC6-219ENST00000476625 CHKAP35790 457 aa12.51□□□□□ -0.41
HDAC6-219ENST00000476625 CTSKP43235 329 aa12.51□□□□□ -0.41
HDAC6-219ENST00000476625 AFF3P51826 1226 aaKnown RBP12.51□□□□□ -0.41
HDAC6-219ENST00000476625 TKTL1P51854 596 aa12.51□□□□□ -0.41
HDAC6-219ENST00000476625 RAD23BP54727 409 aa12.51□□□□□ -0.41
HDAC6-219ENST00000476625 SHBQ15464 509 aa12.51□□□□□ -0.41
HDAC6-219ENST00000476625 RFWD3Q6PCD5 774 aa12.51□□□□□ -0.41
HDAC6-219ENST00000476625 SLC9A9Q8IVB4 645 aa12.51□□□□□ -0.41
HDAC6-219ENST00000476625 FMNL3Q8IVF7 1028 aa12.51□□□□□ -0.41
HDAC6-219ENST00000476625 FAM217AQ8IXS0 508 aa12.51□□□□□ -0.41
HDAC6-219ENST00000476625 CPXM2Q8N436 756 aa12.51□□□□□ -0.41
HDAC6-219ENST00000476625 TAF4BQ92750 862 aa12.51□□□□□ -0.41
HDAC6-219ENST00000476625 TATDN2Q93075 761 aa12.51□□□□□ -0.41
HDAC6-219ENST00000476625 EXOC1Q9NV70 894 aa12.51□□□□□ -0.41
HDAC6-219ENST00000476625 NFE2L3Q9Y4A8 694 aa12.51□□□□□ -0.41
HDAC6-219ENST00000476625 PCDHGB2Q9Y5G2 931 aa12.51□□□□□ -0.41
HDAC6-219ENST00000476625 TNFSF14O43557 240 aa12.5□□□□□ -0.41
HDAC6-219ENST00000476625 GABBR2O75899 941 aa12.5□□□□□ -0.41
HDAC6-219ENST00000476625 CYBBP04839 570 aa12.5□□□□□ -0.41
HDAC6-219ENST00000476625 SLC6A4P31645 630 aa12.5□□□□□ -0.41
HDAC6-219ENST00000476625 ME1P48163 572 aa12.5□□□□□ -0.41
HDAC6-219ENST00000476625 CCT8P50990 548 aa12.5□□□□□ -0.41
HDAC6-219ENST00000476625 COG7P83436 770 aa12.5□□□□□ -0.41
HDAC6-219ENST00000476625 ARID5AQ03989 594 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms