RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 ITPKBP27987 946 aa6.25□□□□□ -1.41
NUP58-209ENST00000476553 NNMTP40261 264 aa6.25□□□□□ -1.41
NUP58-209ENST00000476553 TFCP2Q12800 502 aa6.25□□□□□ -1.41
NUP58-209ENST00000476553 SNAPC2Q13487 334 aa6.25□□□□□ -1.41
NUP58-209ENST00000476553 SLMAPQ14BN4 828 aa6.25□□□□□ -1.41
NUP58-209ENST00000476553 PPP2R5BQ15173 497 aa6.25□□□□□ -1.41
NUP58-209ENST00000476553 E2F5Q15329 346 aa6.25□□□□□ -1.41
NUP58-209ENST00000476553 ADRM1Q16186 407 aa6.25□□□□□ -1.41
NUP58-209ENST00000476553 CYP2A13Q16696 494 aa6.25□□□□□ -1.41
NUP58-209ENST00000476553 C3orf38Q5JPI3 329 aa6.25□□□□□ -1.41
NUP58-209ENST00000476553 FAM47AQ5JRC9 791 aa6.25□□□□□ -1.41
NUP58-209ENST00000476553 CCDC117Q8IWD4 279 aaPredicted RBP6.25□□□□□ -1.41
NUP58-209ENST00000476553 SDCCAG3Q96C92 435 aa6.25□□□□□ -1.41
NUP58-209ENST00000476553 PNPOQ9NVS9 261 aa6.25□□□□□ -1.41
NUP58-209ENST00000476553 PIH1D1Q9NWS0 290 aaKnown RBP6.25□□□□□ -1.41
NUP58-209ENST00000476553 IKBKGQ9Y6K9 419 aa6.25□□□□□ -1.41
NUP58-209ENST00000476553 ZNF804BA4D1E1 1349 aa6.25□□□□□ -1.41
NUP58-209ENST00000476553 PNPLA7Q6ZV29 1317 aa6.25□□□□□ -1.41
NUP58-209ENST00000476553 LRRC14BA6NHZ5 514 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 PLOD2O00469 737 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 UBE2CO00762 179 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 TP73O15350 636 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 ADCY6O43306 1168 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 NDST3O95803 873 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 TK1P04183 234 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 QDPRP09417 244 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 KRT10P13645 584 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 ACSL1P33121 698 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 AARSP49588 968 aaKnown RBP eCLIP6.24□□□□□ -1.41
NUP58-209ENST00000476553 CTCFP49711 727 aaPredicted RBP6.24□□□□□ -1.41
NUP58-209ENST00000476553 ALDH3A2P51648 485 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 VAV2P52735 878 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 PRKAA2P54646 552 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 NLRP5P59047 1200 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 RPS16P62249 146 aaKnown RBP6.24□□□□□ -1.41
NUP58-209ENST00000476553 MC1RQ01726 317 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 LRMPQ12912 555 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 BFSP1Q12934 665 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 MAMLD1Q13495 774 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 TRIM25Q14258 630 aaKnown RBP6.24□□□□□ -1.41
NUP58-209ENST00000476553 TMEM266Q2M3C6 531 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 FLYWCH1Q4VC44 716 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 KIAA0895LQ68EN5 471 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 MED25Q71SY5 747 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 HEATR3Q7Z4Q2 680 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 GALNT7Q86SF2 657 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 ARMC8Q8IUR7 673 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 CEP97Q8IW35 865 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 CCDC170Q8IYT3 715 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 ZNF619Q8N2I2 560 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 KCTD6Q8NC69 237 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 TBC1D22AQ8WUA7 517 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 DPF2Q92785 391 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 CALML4Q96GE6 196 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 PIGSQ96S52 555 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 REXO4Q9GZR2 422 aaKnown RBP6.24□□□□□ -1.41
NUP58-209ENST00000476553 RABEP2Q9H5N1 569 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 UNKLQ9H9P5 680 aaKnown RBP6.24□□□□□ -1.41
NUP58-209ENST00000476553 CNNM1Q9NRU3 951 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 SACM1LQ9NTJ5 587 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.24□□□□□ -1.41
NUP58-209ENST00000476553 CPA4Q9UI42 421 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 PCDHA13Q9Y5I0 950 aa6.24□□□□□ -1.41
NUP58-209ENST00000476553 ASNA1O43681 348 aa6.23□□□□□ -1.41
NUP58-209ENST00000476553 GJB3O75712 270 aa6.23□□□□□ -1.41
NUP58-209ENST00000476553 BEST1O76090 585 aa6.23□□□□□ -1.41
NUP58-209ENST00000476553 MT-ND5P03915 603 aa6.23□□□□□ -1.41
NUP58-209ENST00000476553 GCSHP23434 173 aa6.23□□□□□ -1.41
NUP58-209ENST00000476553 ARL3P36405 182 aa6.23□□□□□ -1.41
NUP58-209ENST00000476553 MCAMP43121 646 aa6.23□□□□□ -1.41
NUP58-209ENST00000476553 CCT4P50991 539 aaKnown RBP6.23□□□□□ -1.41
NUP58-209ENST00000476553 PNLIPRP1P54315 467 aa6.23□□□□□ -1.41
NUP58-209ENST00000476553 SLC12A2P55011 1212 aa6.23□□□□□ -1.41
NUP58-209ENST00000476553 RBP5P82980 135 aa6.23□□□□□ -1.41
NUP58-209ENST00000476553 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.23□□□□□ -1.41
NUP58-209ENST00000476553 TNIP1Q15025 636 aa6.23□□□□□ -1.41
NUP58-209ENST00000476553 TAF7Q15545 349 aaPredicted RBP6.23□□□□□ -1.41
NUP58-209ENST00000476553 SRSF7Q16629 238 aaKnown RBP eCLIP6.23□□□□□ -1.41
NUP58-209ENST00000476553 MUM1L1Q5H9M0 696 aa6.23□□□□□ -1.41
NUP58-209ENST00000476553 C11orf87Q6NUJ2 197 aa6.23□□□□□ -1.41
NUP58-209ENST00000476553 ZNF572Q7Z3I7 529 aaPredicted RBP6.23□□□□□ -1.41
NUP58-209ENST00000476553 SLC9B2Q86UD5 537 aa6.23□□□□□ -1.41
NUP58-209ENST00000476553 GATAD2AQ86YP4 633 aa6.23□□□□□ -1.41
NUP58-209ENST00000476553 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.23□□□□□ -1.41
NUP58-209ENST00000476553 GLIS1Q8NBF1 620 aa6.23□□□□□ -1.41
NUP58-209ENST00000476553 TAF4BQ92750 862 aa6.23□□□□□ -1.41
NUP58-209ENST00000476553 RNF125Q96EQ8 232 aa6.23□□□□□ -1.41
NUP58-209ENST00000476553 PTCD3Q96EY7 689 aaKnown RBP6.23□□□□□ -1.41
NUP58-209ENST00000476553 MRGPRX1Q96LB2 322 aa6.23□□□□□ -1.41
NUP58-209ENST00000476553 CFAP53Q96M91 514 aa6.23□□□□□ -1.41
NUP58-209ENST00000476553 HGH1Q9BTY7 390 aa6.23□□□□□ -1.41
NUP58-209ENST00000476553 ITPAQ9BY32 194 aa6.23□□□□□ -1.41
NUP58-209ENST00000476553 PDCL3Q9H2J4 239 aa6.23□□□□□ -1.41
NUP58-209ENST00000476553 ERVK-5Q9HDB9 667 aa6.23□□□□□ -1.41
NUP58-209ENST00000476553 SARS2Q9NP81 518 aaKnown RBP6.23□□□□□ -1.41
NUP58-209ENST00000476553 HPF1Q9NWY4 346 aa6.23□□□□□ -1.41
NUP58-209ENST00000476553 PI4KBQ9UBF8 816 aa6.23□□□□□ -1.41
NUP58-209ENST00000476553 PCDHA3Q9Y5H8 950 aa6.23□□□□□ -1.41
NUP58-209ENST00000476553 ATRNL1Q5VV63 1379 aa6.22□□□□□ -1.41
NUP58-209ENST00000476553 CCDC69A6NI79 296 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms