RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 OR52L2PQ8NGH6 319 aa5.65□□□□□ -1.5
PTCD3-211ENST00000476215 ADAMTS18Q8TE60 1221 aa5.65□□□□□ -1.5
PTCD3-211ENST00000476215 HMGB4Q8WW32 186 aa5.65□□□□□ -1.5
PTCD3-211ENST00000476215 REXO5Q96IC2 774 aaKnown RBP5.65□□□□□ -1.5
PTCD3-211ENST00000476215 FAR2Q96K12 515 aa5.65□□□□□ -1.5
PTCD3-211ENST00000476215 SCLT1Q96NL6 688 aa5.65□□□□□ -1.5
PTCD3-211ENST00000476215 ELAC1Q9H777 363 aaKnown RBP5.65□□□□□ -1.5
PTCD3-211ENST00000476215 CNTN6Q9UQ52 1028 aa5.65□□□□□ -1.5
PTCD3-211ENST00000476215 PCDHGB3Q9Y5G1 929 aa5.65□□□□□ -1.5
PTCD3-211ENST00000476215 SETD1BQ9UPS6 1966 aaKnown RBP5.65□□□□□ -1.51
PTCD3-211ENST00000476215 FAM90A18PA6NE21 464 aa5.64□□□□□ -1.51
PTCD3-211ENST00000476215 FAM90A16PA6NEW6 464 aa5.64□□□□□ -1.51
PTCD3-211ENST00000476215 FAM90A9PA6NNJ1 464 aa5.64□□□□□ -1.51
PTCD3-211ENST00000476215 FAM90A5PA8MXJ8 464 aa5.64□□□□□ -1.51
PTCD3-211ENST00000476215 BTBD19C9JJ37 291 aa5.64□□□□□ -1.51
PTCD3-211ENST00000476215 POC1B-GALNT4F8VUJ3 575 aa5.64□□□□□ -1.51
PTCD3-211ENST00000476215 UBE2Q2LH0YL09 131 aa5.64□□□□□ -1.51
PTCD3-211ENST00000476215 M0QYT0 321 aa5.64□□□□□ -1.51
PTCD3-211ENST00000476215 FAM90A15PP0C7V4 464 aa5.64□□□□□ -1.51
PTCD3-211ENST00000476215 FAM90A14PP0C7W9 464 aa5.64□□□□□ -1.51
PTCD3-211ENST00000476215 MATN1P21941 496 aa5.64□□□□□ -1.51
PTCD3-211ENST00000476215 WDR5P61964 334 aaKnown RBP5.64□□□□□ -1.51
PTCD3-211ENST00000476215 SF3A3Q12874 501 aaKnown RBP eCLIP5.64□□□□□ -1.511e-8■□□□□ 9.9
PTCD3-211ENST00000476215 RPS6KA2Q15349 733 aa5.64□□□□□ -1.51
PTCD3-211ENST00000476215 TRIM60Q495X7 471 aa5.64□□□□□ -1.51
PTCD3-211ENST00000476215 C4orf46Q504U0 113 aa5.64□□□□□ -1.51
PTCD3-211ENST00000476215 PRAMEF17Q5VTA0 474 aa5.64□□□□□ -1.51
PTCD3-211ENST00000476215 LRCH2Q5VUJ6 765 aa5.64□□□□□ -1.51
PTCD3-211ENST00000476215 LDHAL6AQ6ZMR3 332 aa5.64□□□□□ -1.51
PTCD3-211ENST00000476215 SRRM1Q8IYB3 904 aaKnown RBP5.64□□□□□ -1.51
PTCD3-211ENST00000476215 GALNT4Q8N4A0 578 aa5.64□□□□□ -1.51
PTCD3-211ENST00000476215 PNLDC1Q8NA58 520 aaKnown RBP5.64□□□□□ -1.51
PTCD3-211ENST00000476215 NPIPB3Q92617 1050 aa5.64□□□□□ -1.51
PTCD3-211ENST00000476215 C3orf49Q96BT1 292 aa5.64□□□□□ -1.51
PTCD3-211ENST00000476215 TBC1D20Q96BZ9 403 aa5.64□□□□□ -1.51
PTCD3-211ENST00000476215 POLR3GLQ9BT43 218 aa5.64□□□□□ -1.51
PTCD3-211ENST00000476215 FAM167BQ9BTA0 163 aa5.64□□□□□ -1.51
PTCD3-211ENST00000476215 MECRQ9BV79 373 aa5.64□□□□□ -1.51
PTCD3-211ENST00000476215 VPS16Q9H269 839 aa5.64□□□□□ -1.51
PTCD3-211ENST00000476215 ABHD10Q9NUJ1 306 aa5.64□□□□□ -1.51
PTCD3-211ENST00000476215 C19orf53Q9UNZ5 99 aaPredicted RBP5.64□□□□□ -1.51
PTCD3-211ENST00000476215 LOC105369274A0A096LPK9 316 aa5.63□□□□□ -1.51
PTCD3-211ENST00000476215 LOC102724159A0A0B4J2E5 919 aa5.63□□□□□ -1.51
PTCD3-211ENST00000476215 LOC102723532A0A0G2JNH3 316 aa5.63□□□□□ -1.51
PTCD3-211ENST00000476215 EFCAB8A8MWE9 144 aa5.63□□□□□ -1.51
PTCD3-211ENST00000476215 H3BNC9 293 aa5.63□□□□□ -1.51
PTCD3-211ENST00000476215 LARGE1O95461 756 aa5.63□□□□□ -1.51
PTCD3-211ENST00000476215 SLC3A2P08195 630 aaKnown RBP5.63□□□□□ -1.51
PTCD3-211ENST00000476215 NHLRC4P0CG21 123 aaPredicted RBP5.63□□□□□ -1.51
PTCD3-211ENST00000476215 DHRS4L1P0CG22 281 aa5.63□□□□□ -1.51
PTCD3-211ENST00000476215 DUSP1P28562 367 aa5.63□□□□□ -1.51
PTCD3-211ENST00000476215 RNASELQ05823 741 aaKnown RBP5.63□□□□□ -1.51
PTCD3-211ENST00000476215 KRTAP1-1Q07627 177 aa5.63□□□□□ -1.51
PTCD3-211ENST00000476215 LARS2Q15031 903 aaKnown RBP5.63□□□□□ -1.51
PTCD3-211ENST00000476215 PWP2Q15269 919 aaKnown RBP5.63□□□□□ -1.51
PTCD3-211ENST00000476215 TAF5Q15542 800 aa5.63□□□□□ -1.51
PTCD3-211ENST00000476215 AAK1Q2M2I8 961 aa5.63□□□□□ -1.51
PTCD3-211ENST00000476215 CERKLQ49MI3 558 aaPredicted RBP5.63□□□□□ -1.51
PTCD3-211ENST00000476215 AWAT1Q58HT5 328 aa5.63□□□□□ -1.51
PTCD3-211ENST00000476215 CC2D1BQ5T0F9 858 aaKnown RBP5.63□□□□□ -1.51
PTCD3-211ENST00000476215 VSTM1Q6UX27 236 aa5.63□□□□□ -1.51
PTCD3-211ENST00000476215 ZNF788Q6ZQV5 615 aa5.63□□□□□ -1.51
PTCD3-211ENST00000476215 RRAGAQ7L523 313 aa5.63□□□□□ -1.51
PTCD3-211ENST00000476215 PTF1AQ7RTS3 328 aa5.63□□□□□ -1.51
PTCD3-211ENST00000476215 CHSY1Q86X52 802 aa5.63□□□□□ -1.51
PTCD3-211ENST00000476215 OR4N4Q8N0Y3 316 aa5.63□□□□□ -1.51
PTCD3-211ENST00000476215 GLMPQ8WWB7 406 aa5.63□□□□□ -1.51
PTCD3-211ENST00000476215 KAZALD1Q96I82 304 aa5.63□□□□□ -1.51
PTCD3-211ENST00000476215 RITA1Q96K30 269 aa5.63□□□□□ -1.51
PTCD3-211ENST00000476215 TRAPPC9Q96Q05 1148 aa5.63□□□□□ -1.51
PTCD3-211ENST00000476215 TAF1DQ9H5J8 278 aaPredicted RBP5.63□□□□□ -1.51
PTCD3-211ENST00000476215 CDCP1Q9H5V8 836 aa5.63□□□□□ -1.51
PTCD3-211ENST00000476215 KCNK9Q9NPC2 374 aa5.63□□□□□ -1.51
PTCD3-211ENST00000476215 GAR1Q9NY12 217 aaKnown RBP5.63□□□□□ -1.51
PTCD3-211ENST00000476215 SRP68Q9UHB9 627 aaKnown RBP5.63□□□□□ -1.51
PTCD3-211ENST00000476215 RAB21Q9UL25 225 aa5.63□□□□□ -1.51
PTCD3-211ENST00000476215 ZBTB1Q9Y2K1 713 aa5.63□□□□□ -1.51
PTCD3-211ENST00000476215 CGB1A6NKQ9 187 aa5.62□□□□□ -1.51
PTCD3-211ENST00000476215 TTC34A8MYJ7 566 aa5.62□□□□□ -1.51
PTCD3-211ENST00000476215 NKX2-8O15522 239 aa5.62□□□□□ -1.51
PTCD3-211ENST00000476215 CYP2D6P10635 497 aa5.62□□□□□ -1.51
PTCD3-211ENST00000476215 PEPDP12955 493 aa5.62□□□□□ -1.51
PTCD3-211ENST00000476215 ATF7P17544 494 aaPredicted RBP5.62□□□□□ -1.51
PTCD3-211ENST00000476215 PPM1FP49593 454 aaPredicted RBP5.62□□□□□ -1.51
PTCD3-211ENST00000476215 CNGA3Q16281 694 aa5.62□□□□□ -1.51
PTCD3-211ENST00000476215 PROSER3Q2NL68 480 aa5.62□□□□□ -1.51
PTCD3-211ENST00000476215 TTC22Q5TAA0 569 aa5.62□□□□□ -1.51
PTCD3-211ENST00000476215 RFX8Q6ZV50 586 aa5.62□□□□□ -1.51
PTCD3-211ENST00000476215 CPT1BQ92523 772 aa5.62□□□□□ -1.51
PTCD3-211ENST00000476215 AKAP1Q92667 903 aaKnown RBP eCLIP5.62□□□□□ -1.51
PTCD3-211ENST00000476215 HIC2Q96JB3 615 aa5.62□□□□□ -1.51
PTCD3-211ENST00000476215 ASB2Q96Q27 587 aa5.62□□□□□ -1.51
PTCD3-211ENST00000476215 ISCA1Q9BUE6 129 aa5.62□□□□□ -1.51
PTCD3-211ENST00000476215 DDX23Q9BUQ8 820 aaKnown RBP5.62□□□□□ -1.51
PTCD3-211ENST00000476215 ELOVL1Q9BW60 279 aa5.62□□□□□ -1.51
PTCD3-211ENST00000476215 SAYSD1Q9NPB0 183 aa5.62□□□□□ -1.51
PTCD3-211ENST00000476215 LIN7CQ9NUP9 197 aaKnown RBP5.62□□□□□ -1.51
PTCD3-211ENST00000476215 TRPC5Q9UL62 973 aaPredicted RBP5.62□□□□□ -1.51
PTCD3-211ENST00000476215 AOX1Q06278 1338 aa5.62□□□□□ -1.51
PTCD3-211ENST00000476215 SLC38A8A6NNN8 435 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms