RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 DBNDD1Q9H9R9 158 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 BRF2Q9HAW0 419 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 PLEKHA2Q9HB19 425 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 FSCN3Q9NQT6 498 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 TRPM5Q9NZQ8 1165 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 DNAJB11Q9UBS4 358 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 KCNE5Q9UJ90 142 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 USP22Q9UPT9 525 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 SORCS3Q9UPU3 1222 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 CHST2Q9Y4C5 530 aa4.56□□□□□ -1.68
VPS13D-207ENST00000476169 SPATA31A3Q5VYP0 1347 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 CCDC180Q9P1Z9 1646 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 A0A1W2PS29 197 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 MYADML2A6NDP7 307 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 SAC3D1A6NKF1 404 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 TRIM24O15164 1050 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 TRIAP1O43715 76 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 TAF5LO75529 589 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 ERAL1O75616 437 aaKnown RBP4.55□□□□□ -1.68
VPS13D-207ENST00000476169 RECQL4O94761 1208 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 SCAF4O95104 1147 aaKnown RBP4.55□□□□□ -1.68
VPS13D-207ENST00000476169 CCNDBP1O95273 360 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 CER1O95813 267 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 HNRNPCP07910 306 aaKnown RBP eCLIP4.55□□□□□ -1.68
VPS13D-207ENST00000476169 IL11P20809 199 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 ACO1P21399 889 aaKnown RBP4.55□□□□□ -1.68
VPS13D-207ENST00000476169 PSMA4P25789 261 aaKnown RBP4.55□□□□□ -1.68
VPS13D-207ENST00000476169 CFPP27918 469 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 PRKAR1BP31321 381 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 HIBADHP31937 336 aaKnown RBP4.55□□□□□ -1.68
VPS13D-207ENST00000476169 ACSL1P33121 698 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 EIF2DP41214 584 aaKnown RBP4.55□□□□□ -1.68
VPS13D-207ENST00000476169 RGS2P41220 211 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 PGDP52209 483 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 RPS7P62081 194 aaKnown RBP4.55□□□□□ -1.68
VPS13D-207ENST00000476169 DYRK1AQ13627 763 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 CAMK1Q14012 370 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 SCARB2Q14108 478 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 NFIXQ14938 502 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 TRIM60Q495X7 471 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 CD300EQ496F6 205 aaPredicted RBP4.55□□□□□ -1.68
VPS13D-207ENST00000476169 DUSP28Q4G0W2 176 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 BMP2KLQ5H9B9 411 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 RBM20Q5T481 1227 aaKnown RBP4.55□□□□□ -1.68
VPS13D-207ENST00000476169 CERCAMQ5T4B2 595 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 SFRP4Q6FHJ7 346 aaPredicted RBP4.55□□□□□ -1.68
VPS13D-207ENST00000476169 MAMDC4Q6UXC1 1216 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 MFSD6Q6ZSS7 791 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 PRPF39Q86UA1 669 aaKnown RBP4.55□□□□□ -1.68
VPS13D-207ENST00000476169 HSCBQ8IWL3 235 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 Q8NA96 180 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 KTI12Q96EK9 354 aaPredicted RBP4.55□□□□□ -1.68
VPS13D-207ENST00000476169 RNF31Q96EP0 1072 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 EIF3CQ99613 913 aaKnown RBP4.55□□□□□ -1.68
VPS13D-207ENST00000476169 LBHD1Q9BQE6 289 aaPredicted RBP4.55□□□□□ -1.68
VPS13D-207ENST00000476169 MECRQ9BV79 373 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 TEX101Q9BY14 249 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 MRPL9Q9BYD2 267 aaKnown RBP4.55□□□□□ -1.68
VPS13D-207ENST00000476169 OR10A4Q9H209 315 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 RANBP17Q9H2T7 1088 aaKnown RBP4.55□□□□□ -1.68
VPS13D-207ENST00000476169 SMARCAD1Q9H4L7 1026 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 CD248Q9HCU0 757 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 ERVK-5Q9HDB9 667 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 LIN7CQ9NUP9 197 aaKnown RBP4.55□□□□□ -1.68
VPS13D-207ENST00000476169 ABCF3Q9NUQ8 709 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 ALKBH4Q9NXW9 302 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 CORO1CQ9ULV4 474 aaPredicted RBP4.55□□□□□ -1.68
VPS13D-207ENST00000476169 NFU1Q9UMS0 254 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 GDAQ9Y2T3 454 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.55□□□□□ -1.68
VPS13D-207ENST00000476169 LYVE1Q9Y5Y7 322 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 FPGT-TNNI3KV9GXZ4 949 aa4.55□□□□□ -1.68
VPS13D-207ENST00000476169 XDHP47989 1333 aa4.54□□□□□ -1.68
VPS13D-207ENST00000476169 OR2W5A6NFC9 320 aa4.54□□□□□ -1.68
VPS13D-207ENST00000476169 FAM90A20PA6NIJ5 464 aa4.54□□□□□ -1.68
VPS13D-207ENST00000476169 A8MV72 311 aaPredicted RBP4.54□□□□□ -1.68
VPS13D-207ENST00000476169 HNRNPCL1O60812 293 aaKnown RBP4.54□□□□□ -1.68
VPS13D-207ENST00000476169 TGDSO95455 350 aa4.54□□□□□ -1.68
VPS13D-207ENST00000476169 LARGE1O95461 756 aa4.54□□□□□ -1.68
VPS13D-207ENST00000476169 BAG2O95816 211 aa4.54□□□□□ -1.68
VPS13D-207ENST00000476169 AFPP02771 609 aaKnown RBP4.54□□□□□ -1.68
VPS13D-207ENST00000476169 CFIP05156 583 aa4.54□□□□□ -1.68
VPS13D-207ENST00000476169 PTMAP06454 111 aaKnown RBP4.54□□□□□ -1.68
VPS13D-207ENST00000476169 CSF1RP07333 972 aa4.54□□□□□ -1.68
VPS13D-207ENST00000476169 ELANEP08246 267 aa4.54□□□□□ -1.68
VPS13D-207ENST00000476169 ADORA2AP29274 412 aa4.54□□□□□ -1.68
VPS13D-207ENST00000476169 EPHA8P29322 1005 aaPredicted RBP4.54□□□□□ -1.68
VPS13D-207ENST00000476169 NTSR1P30989 418 aa4.54□□□□□ -1.68
VPS13D-207ENST00000476169 HOXC13P31276 330 aa4.54□□□□□ -1.68
VPS13D-207ENST00000476169 CLK1P49759 484 aaKnown RBP4.54□□□□□ -1.68
VPS13D-207ENST00000476169 PDE6CP51160 858 aa4.54□□□□□ -1.68
VPS13D-207ENST00000476169 CXADRP78310 365 aa4.54□□□□□ -1.68
VPS13D-207ENST00000476169 WASHC5Q12768 1159 aa4.54□□□□□ -1.68
VPS13D-207ENST00000476169 EPS8Q12929 822 aa4.54□□□□□ -1.68
VPS13D-207ENST00000476169 TUBB3Q13509 450 aa4.54□□□□□ -1.68
VPS13D-207ENST00000476169 CCNIQ14094 377 aa4.54□□□□□ -1.68
VPS13D-207ENST00000476169 HLXQ14774 488 aaPredicted RBP4.54□□□□□ -1.68
VPS13D-207ENST00000476169 TBCCQ15814 346 aa4.54□□□□□ -1.68
VPS13D-207ENST00000476169 GEN1Q17RS7 908 aa4.54□□□□□ -1.68
VPS13D-207ENST00000476169 LRRC24Q50LG9 513 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 150.6 ms