RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 BAHCC1Q9P281 2608 aa16.35■□□□□ 0.21
SRRT-209ENST00000474896 CBFA2T3O75081 653 aa16.35■□□□□ 0.21
SRRT-209ENST00000474896 ZNF202O95125 648 aa16.35■□□□□ 0.21
SRRT-209ENST00000474896 EPHX1P07099 455 aa16.35■□□□□ 0.21
SRRT-209ENST00000474896 PRKCHP24723 683 aa16.35■□□□□ 0.21
SRRT-209ENST00000474896 PSMC2P35998 433 aaKnown RBP16.35■□□□□ 0.21
SRRT-209ENST00000474896 YWHAGP61981 247 aaKnown RBP eCLIP16.35■□□□□ 0.21
SRRT-209ENST00000474896 NFIL3Q16649 462 aa16.35■□□□□ 0.21
SRRT-209ENST00000474896 HLA-BQ31612 363 aa16.35■□□□□ 0.21
SRRT-209ENST00000474896 TMEM215Q68D42 235 aa16.35■□□□□ 0.21
SRRT-209ENST00000474896 CCNI2Q6ZMN8 369 aaPredicted RBP16.35■□□□□ 0.21
SRRT-209ENST00000474896 FAM124AQ86V42 546 aa16.35■□□□□ 0.21
SRRT-209ENST00000474896 PIGZQ86VD9 579 aa16.35■□□□□ 0.21
SRRT-209ENST00000474896 CACUL1Q86Y37 369 aa16.35■□□□□ 0.21
SRRT-209ENST00000474896 CPXM2Q8N436 756 aa16.35■□□□□ 0.21
SRRT-209ENST00000474896 SLC4A11Q8NBS3 891 aa16.35■□□□□ 0.21
SRRT-209ENST00000474896 RBBP8NLQ8NC74 664 aaPredicted RBP16.35■□□□□ 0.21
SRRT-209ENST00000474896 NDRG1Q92597 394 aaKnown RBP16.35■□□□□ 0.21
SRRT-209ENST00000474896 SEMA4DQ92854 862 aa16.35■□□□□ 0.21
SRRT-209ENST00000474896 TMEM176AQ96HP8 235 aa16.35■□□□□ 0.21
SRRT-209ENST00000474896 SLC2A11Q9BYW1 496 aa16.35■□□□□ 0.21
SRRT-209ENST00000474896 PCOLCE2Q9UKZ9 415 aa16.35■□□□□ 0.21
SRRT-209ENST00000474896 KNL1Q8NG31 2342 aa16.34■□□□□ 0.21
SRRT-209ENST00000474896 DMXL2Q8TDJ6 3036 aa16.34■□□□□ 0.21
SRRT-209ENST00000474896 RHOBTB3O94955 611 aa16.34■□□□□ 0.21
SRRT-209ENST00000474896 IGLV3-19P01714 112 aa16.34■□□□□ 0.21
SRRT-209ENST00000474896 PRR29P0C7W0 189 aa16.34■□□□□ 0.21
SRRT-209ENST00000474896 HLA-EP13747 358 aa16.34■□□□□ 0.21
SRRT-209ENST00000474896 RPL13P26373 211 aaKnown RBP16.34■□□□□ 0.21
SRRT-209ENST00000474896 MATKP42679 507 aa16.34■□□□□ 0.21
SRRT-209ENST00000474896 RAD23BP54727 409 aa16.34■□□□□ 0.21
SRRT-209ENST00000474896 BNC1Q01954 994 aa16.34■□□□□ 0.21
SRRT-209ENST00000474896 ARID5AQ03989 594 aa16.34■□□□□ 0.21
SRRT-209ENST00000474896 ENPEPQ07075 957 aa16.34■□□□□ 0.21
SRRT-209ENST00000474896 EIF4HQ15056 248 aaKnown RBP16.34■□□□□ 0.21
SRRT-209ENST00000474896 RAB41Q5JT25 222 aa16.34■□□□□ 0.21
SRRT-209ENST00000474896 KRT39Q6A163 491 aa16.34■□□□□ 0.21
SRRT-209ENST00000474896 C19orf48Q6RUI8 117 aa16.34■□□□□ 0.21
SRRT-209ENST00000474896 IL27RAQ6UWB1 636 aa16.34■□□□□ 0.21
SRRT-209ENST00000474896 SERPINA13PQ6UXR4 307 aa16.34■□□□□ 0.21
SRRT-209ENST00000474896 KRBA2Q6ZNG9 492 aa16.34■□□□□ 0.21
SRRT-209ENST00000474896 CCDC47Q96A33 483 aaKnown RBP16.34■□□□□ 0.21
SRRT-209ENST00000474896 ARID3AQ99856 593 aa16.34■□□□□ 0.21
SRRT-209ENST00000474896 TM7SF3Q9NS93 570 aa16.34■□□□□ 0.21
SRRT-209ENST00000474896 CISHQ9NSE2 258 aa16.34■□□□□ 0.21
SRRT-209ENST00000474896 PLXNB3Q9ULL4 1909 aa16.34■□□□□ 0.21
SRRT-209ENST00000474896 TSPAN3O60637 253 aa16.33■□□□□ 0.2
SRRT-209ENST00000474896 CER1O95813 267 aa16.33■□□□□ 0.2
SRRT-209ENST00000474896 ZBED1O96006 694 aa16.33■□□□□ 0.2
SRRT-209ENST00000474896 ZNF883P0CG24 379 aa16.33■□□□□ 0.2
SRRT-209ENST00000474896 GTF2H1P32780 548 aa16.33■□□□□ 0.2
SRRT-209ENST00000474896 CSNK1EP49674 416 aaKnown RBP16.33■□□□□ 0.2
SRRT-209ENST00000474896 TKTL1P51854 596 aa16.33■□□□□ 0.2
SRRT-209ENST00000474896 SLC8A3P57103 927 aa16.33■□□□□ 0.2
SRRT-209ENST00000474896 ARHGAP17Q68EM7 881 aa16.33■□□□□ 0.2
SRRT-209ENST00000474896 PM20D1Q6GTS8 502 aa16.33■□□□□ 0.2
SRRT-209ENST00000474896 GLRX5Q86SX6 157 aa16.33■□□□□ 0.2
SRRT-209ENST00000474896 FAM217AQ8IXS0 508 aa16.33■□□□□ 0.2
SRRT-209ENST00000474896 TTC39CQ8N584 583 aa16.33■□□□□ 0.2
SRRT-209ENST00000474896 ANKRD52Q8NB46 1076 aa16.33■□□□□ 0.2
SRRT-209ENST00000474896 C1orf216Q8TAB5 229 aa16.33■□□□□ 0.2
SRRT-209ENST00000474896 RHBDD1Q8TEB9 315 aa16.33■□□□□ 0.2
SRRT-209ENST00000474896 TATDN2Q93075 761 aa16.33■□□□□ 0.2
SRRT-209ENST00000474896 PLD4Q96BZ4 506 aa16.33■□□□□ 0.2
SRRT-209ENST00000474896 KIAA1522Q9P206 1035 aaPredicted RBP16.33■□□□□ 0.2
SRRT-209ENST00000474896 FNDC3AQ9Y2H6 1198 aaKnown RBP16.33■□□□□ 0.2
SRRT-209ENST00000474896 A0A1B0GVT2 93 aa16.32■□□□□ 0.2
SRRT-209ENST00000474896 HARS2P49590 506 aaKnown RBP16.32■□□□□ 0.2
SRRT-209ENST00000474896 ADAMTS20P59510 1910 aa16.32■□□□□ 0.2
SRRT-209ENST00000474896 MCCD1P59942 119 aaPredicted RBP16.32■□□□□ 0.2
SRRT-209ENST00000474896 TRIP4Q15650 581 aaPredicted RBP16.32■□□□□ 0.2
SRRT-209ENST00000474896 MPPE1Q53F39 396 aa16.32■□□□□ 0.2
SRRT-209ENST00000474896 DBX2Q6ZNG2 339 aa16.32■□□□□ 0.2
SRRT-209ENST00000474896 FMNL3Q8IVF7 1028 aa16.32■□□□□ 0.2
SRRT-209ENST00000474896 GUF1Q8N442 669 aaKnown RBP16.32■□□□□ 0.2
SRRT-209ENST00000474896 FBXL13Q8NEE6 735 aa16.32■□□□□ 0.2
SRRT-209ENST00000474896 OR2T3Q8NH03 318 aa16.32■□□□□ 0.2
SRRT-209ENST00000474896 CYB5D2Q8WUJ1 264 aa16.32■□□□□ 0.2
SRRT-209ENST00000474896 SNX19Q92543 992 aa16.32■□□□□ 0.2
SRRT-209ENST00000474896 FAXDC2Q96IV6 333 aa16.32■□□□□ 0.2
SRRT-209ENST00000474896 ULBP1Q9BZM6 244 aa16.32■□□□□ 0.2
SRRT-209ENST00000474896 CCDC86Q9H6F5 360 aaKnown RBP16.32■□□□□ 0.2
SRRT-209ENST00000474896 C6orf106Q9H6K1 298 aaPredicted RBP16.32■□□□□ 0.2
SRRT-209ENST00000474896 RAB20Q9NX57 234 aa16.32■□□□□ 0.2
SRRT-209ENST00000474896 PLA2G4CQ9UP65 541 aa16.32■□□□□ 0.2
SRRT-209ENST00000474896 GPSM3Q9Y4H4 160 aa16.32■□□□□ 0.2
SRRT-209ENST00000474896 NUMA1Q14980 2115 aa16.31■□□□□ 0.2
SRRT-209ENST00000474896 CKAP5Q14008 2032 aa16.31■□□□□ 0.2
SRRT-209ENST00000474896 TULP2O00295 520 aa16.31■□□□□ 0.2
SRRT-209ENST00000474896 HOXD9P28356 352 aaPredicted RBP16.31■□□□□ 0.2
SRRT-209ENST00000474896 ACSL1P33121 698 aa16.31■□□□□ 0.2
SRRT-209ENST00000474896 DPYDQ12882 1025 aa16.31■□□□□ 0.2
SRRT-209ENST00000474896 CAMK2GQ13555 558 aaPredicted RBP16.31■□□□□ 0.2
SRRT-209ENST00000474896 FNDC3BQ53EP0 1204 aaKnown RBP16.31■□□□□ 0.2
SRRT-209ENST00000474896 TMA16Q96EY4 203 aaKnown RBP16.31■□□□□ 0.2
SRRT-209ENST00000474896 EEF2KMTQ96G04 330 aa16.31■□□□□ 0.2
SRRT-209ENST00000474896 TIGD1Q96MW7 591 aa16.31■□□□□ 0.2
SRRT-209ENST00000474896 PCED1AQ9H1Q7 454 aa16.31■□□□□ 0.2
SRRT-209ENST00000474896 LHX5Q9H2C1 402 aa16.31■□□□□ 0.2
SRRT-209ENST00000474896 OLA1Q9NTK5 396 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms