RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 BCLAF3A2AJT9 711 aaKnown RBP4.23□□□□□ -1.73
USP16-205ENST00000474835 HTRA2O43464 458 aaPredicted RBP4.23□□□□□ -1.73
USP16-205ENST00000474835 UGT2B11O75310 529 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 SUPT3HO75486 399 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 ALX3O95076 343 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 GABARAPO95166 117 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 SGPL1O95470 568 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 CLPTM1O96005 669 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 PIGRP01833 764 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 ACADMP11310 421 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 PRKCAP17252 672 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 PMLP29590 882 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 SLCO1A2P46721 670 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 KCNJ1P48048 391 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 AP3M2P53677 418 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 NUP107P57740 925 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 DLG4P78352 724 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 MECOMQ03112 1051 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 BFSP1Q12934 665 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 ENOX2Q16206 610 aaKnown RBP4.23□□□□□ -1.73
USP16-205ENST00000474835 CRY1Q16526 586 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 TSR1Q2NL82 804 aaKnown RBP4.23□□□□□ -1.73
USP16-205ENST00000474835 CYBRD1Q53TN4 286 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 TRIM67Q6ZTA4 783 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 ZNF365Q70YC5 407 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 DET1Q7L5Y6 550 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 SLC15A4Q8N697 577 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 KYQ8NBH2 561 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 PNMA1Q8ND90 353 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 ZSCAN18Q8TBC5 510 aaPredicted RBP4.23□□□□□ -1.73
USP16-205ENST00000474835 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.23□□□□□ -1.73
USP16-205ENST00000474835 FNIP1Q8TF40 1166 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 GRK7Q8WTQ7 553 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 ATL1Q8WXF7 558 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 HHIPQ96QV1 700 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 ZNF347Q96SE7 839 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 IKZF4Q9H2S9 585 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 TMEM260Q9NX78 707 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 RIPK3Q9Y572 518 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 A0A0X1KG70 313 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 A0A1W2PQ67 120 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 CAPN8A6NHC0 703 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 C19orf67A6NJJ6 358 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 DHX15O43143 795 aaKnown RBP4.23□□□□□ -1.73
USP16-205ENST00000474835 GRID2O43424 1007 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 NUAK1O60285 661 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 NDST3O95803 873 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 POLR2MP0CAP2 368 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 CYP2D6P10635 497 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 MYL2P10916 166 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 CYP11B1P15538 503 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 PAX3P23760 479 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 IL4RP24394 825 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 STAT3P40763 770 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 BST1Q10588 318 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 PMS2P3Q13401 168 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 HLTFQ14527 1009 aaKnown RBP eCLIP4.23□□□□□ -1.73
USP16-205ENST00000474835 MFSD10Q14728 455 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 SF3B4Q15427 424 aaKnown RBP eCLIP4.23□□□□□ -1.732e-6■■■■■ 33.2
USP16-205ENST00000474835 NPTX1Q15818 432 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 Q5BKY6 102 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 KIAA0319Q5VV43 1072 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 PHYKPLQ8IUZ5 450 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 SRRM1Q8IYB3 904 aaKnown RBP4.23□□□□□ -1.73
USP16-205ENST00000474835 WDTC1Q8N5D0 677 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 TERB1Q8NA31 727 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 PNPT1Q8TCS8 783 aaKnown RBP4.23□□□□□ -1.73
USP16-205ENST00000474835 DYNC2LI1Q8TCX1 351 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 ASB9Q96DX5 294 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 OTUD5Q96G74 571 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 CFAP57Q96MR6 1250 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 GPR78Q96P69 363 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 ZNF300Q96RE9 604 aaPredicted RBP4.23□□□□□ -1.73
USP16-205ENST00000474835 PAFAH2Q99487 392 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 TSSK1BQ9BXA7 367 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 OSBPL11Q9BXB4 747 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 ALOXE3Q9BYJ1 711 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 SLIRPQ9GZT3 109 aaKnown RBP4.23□□□□□ -1.73
USP16-205ENST00000474835 NTN4Q9HB63 628 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 TUFT1Q9NNX1 390 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 AGO1Q9UL18 857 aaKnown RBP4.23□□□□□ -1.73
USP16-205ENST00000474835 GNEQ9Y223 722 aaKnown RBP4.23□□□□□ -1.73
USP16-205ENST00000474835 A0A0U1RQS6 177 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 ERVH48-1M5A8F1 160 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 GYG2O15488 501 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 CLDN3O15551 220 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 LPXNO60711 386 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 FTLP02792 175 aaPredicted RBP4.23□□□□□ -1.73
USP16-205ENST00000474835 ALDOAP04075 364 aaKnown RBP4.23□□□□□ -1.73
USP16-205ENST00000474835 SEMG1P04279 462 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 TRAPPC2P0DI81 140 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 TRAPPC2BP0DI82 140 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 IL1R1P14778 569 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 GAP43P17677 238 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 KRT4P19013 534 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 ENDOUP21128 410 aaKnown RBP4.23□□□□□ -1.73
USP16-205ENST00000474835 MATN1P21941 496 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 NR2F2P24468 414 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 TGFBR2P37173 567 aa4.23□□□□□ -1.73
USP16-205ENST00000474835 HLCSP50747 726 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms