RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 GREM1O60565 184 aa15.79■□□□□ 0.12
VARS-223ENST00000474643 BRD2P25440 801 aaKnown RBP15.79■□□□□ 0.12
VARS-223ENST00000474643 MAPK8P45983 427 aa15.79■□□□□ 0.12
VARS-223ENST00000474643 ZNF165P49910 485 aa15.79■□□□□ 0.12
VARS-223ENST00000474643 NOVA1P51513 510 aaKnown RBP15.79■□□□□ 0.12
VARS-223ENST00000474643 TPM4P67936 248 aa15.79■□□□□ 0.12
VARS-223ENST00000474643 APBA1Q02410 837 aa15.79■□□□□ 0.12
VARS-223ENST00000474643 RAPGEF1Q13905 1077 aa15.79■□□□□ 0.12
VARS-223ENST00000474643 STILQ15468 1287 aa15.79■□□□□ 0.12
VARS-223ENST00000474643 RAB41Q5JT25 222 aa15.79■□□□□ 0.12
VARS-223ENST00000474643 PSAPL1Q6NUJ1 521 aa15.79■□□□□ 0.12
VARS-223ENST00000474643 RABEPKQ7Z6M1 372 aa15.79■□□□□ 0.12
VARS-223ENST00000474643 FMNL3Q8IVF7 1028 aa15.79■□□□□ 0.12
VARS-223ENST00000474643 RGL4Q8IZJ4 473 aa15.79■□□□□ 0.12
VARS-223ENST00000474643 DEFB119Q8N690 84 aa15.79■□□□□ 0.12
VARS-223ENST00000474643 EDEM1Q92611 657 aa15.79■□□□□ 0.12
VARS-223ENST00000474643 LSM14BQ9BX40 385 aaKnown RBP15.79■□□□□ 0.12
VARS-223ENST00000474643 ABCC13Q9NSE7 274 aa15.79■□□□□ 0.12
VARS-223ENST00000474643 DNAJC12Q9UKB3 198 aa15.79■□□□□ 0.12
VARS-223ENST00000474643 AGO1Q9UL18 857 aaKnown RBP15.79■□□□□ 0.12
VARS-223ENST00000474643 RAD54BQ9Y620 910 aa15.79■□□□□ 0.12
VARS-223ENST00000474643 PATE3B3GLJ2 98 aa15.78■□□□□ 0.12
VARS-223ENST00000474643 PRRT4C9JH25 899 aa15.78■□□□□ 0.12
VARS-223ENST00000474643 RNF225M0QZC1 329 aaPredicted RBP15.78■□□□□ 0.12
VARS-223ENST00000474643 PTGER3P43115 390 aa15.78■□□□□ 0.12
VARS-223ENST00000474643 RGS7P49802 495 aa15.78■□□□□ 0.12
VARS-223ENST00000474643 COPB1P53618 953 aaKnown RBP15.78■□□□□ 0.12
VARS-223ENST00000474643 MAP7D1Q3KQU3 841 aa15.78■□□□□ 0.12
VARS-223ENST00000474643 SYCP2LQ5T4T6 812 aa15.78■□□□□ 0.12
VARS-223ENST00000474643 FRMD1Q8N878 549 aa15.78■□□□□ 0.12
VARS-223ENST00000474643 CEP76Q8TAP6 659 aa15.78■□□□□ 0.12
VARS-223ENST00000474643 ACOX2Q99424 681 aa15.78■□□□□ 0.12
VARS-223ENST00000474643 MBD1Q9UIS9 605 aaPredicted RBP15.78■□□□□ 0.12
VARS-223ENST00000474643 ANGPTL2Q9UKU9 493 aa15.78■□□□□ 0.12
VARS-223ENST00000474643 HBS1LQ9Y450 684 aaKnown RBP15.78■□□□□ 0.12
VARS-223ENST00000474643 TYW5A2RUC4 315 aaKnown RBP15.77■□□□□ 0.12
VARS-223ENST00000474643 TULP2O00295 520 aa15.77■□□□□ 0.12
VARS-223ENST00000474643 O00370 1275 aa15.77■□□□□ 0.12
VARS-223ENST00000474643 GFRA2O00451 464 aa15.77■□□□□ 0.12
VARS-223ENST00000474643 PIK3R2O00459 728 aa15.77■□□□□ 0.12
VARS-223ENST00000474643 NPC1O15118 1278 aa15.77■□□□□ 0.12
VARS-223ENST00000474643 THAP12O43422 761 aa15.77■□□□□ 0.12
VARS-223ENST00000474643 MED7O43513 233 aa15.77■□□□□ 0.12
VARS-223ENST00000474643 TSPAN3O60637 253 aa15.77■□□□□ 0.12
VARS-223ENST00000474643 KCNK5O95279 499 aa15.77■□□□□ 0.12
VARS-223ENST00000474643 PENKP01210 267 aaPredicted RBP15.77■□□□□ 0.12
VARS-223ENST00000474643 CALCAP01258 141 aa15.77■□□□□ 0.12
VARS-223ENST00000474643 KLKB1P03952 638 aa15.77■□□□□ 0.12
VARS-223ENST00000474643 ACADMP11310 421 aa15.77■□□□□ 0.12
VARS-223ENST00000474643 NDUFV2P19404 249 aa15.77■□□□□ 0.12
VARS-223ENST00000474643 GNA15P30679 374 aa15.77■□□□□ 0.12
VARS-223ENST00000474643 IRX4P78413 519 aa15.77■□□□□ 0.12
VARS-223ENST00000474643 GFPT1Q06210 699 aaPredicted RBP15.77■□□□□ 0.12
VARS-223ENST00000474643 MPPE1Q53F39 396 aa15.77■□□□□ 0.12
VARS-223ENST00000474643 BSPRYQ5W0U4 402 aa15.77■□□□□ 0.12
VARS-223ENST00000474643 CCDC117Q8IWD4 279 aaPredicted RBP15.77■□□□□ 0.12
VARS-223ENST00000474643 HDDC3Q8N4P3 179 aa15.77■□□□□ 0.12
VARS-223ENST00000474643 NDRG1Q92597 394 aaKnown RBP15.77■□□□□ 0.12
VARS-223ENST00000474643 GABRG3Q99928 467 aa15.77■□□□□ 0.12
VARS-223ENST00000474643 GTPBP2Q9BX10 602 aaKnown RBP15.77■□□□□ 0.12
VARS-223ENST00000474643 CNGB3Q9NQW8 809 aa15.77■□□□□ 0.12
VARS-223ENST00000474643 LIMA1Q9UHB6 759 aaKnown RBP15.77■□□□□ 0.12
VARS-223ENST00000474643 EVLQ9UI08 416 aaPredicted RBP15.77■□□□□ 0.12
VARS-223ENST00000474643 STON1Q9Y6Q2 735 aa15.77■□□□□ 0.12
VARS-223ENST00000474643 A0A1W2PQF6 199 aa15.76■□□□□ 0.11
VARS-223ENST00000474643 YJEFN3A6XGL0 299 aa15.76■□□□□ 0.11
VARS-223ENST00000474643 MEI4A8MW99 385 aa15.76■□□□□ 0.11
VARS-223ENST00000474643 E7ENQ6 273 aa15.76■□□□□ 0.11
VARS-223ENST00000474643 ITPKAP23677 461 aa15.76■□□□□ 0.11
VARS-223ENST00000474643 HOXD12P35452 270 aa15.76■□□□□ 0.11
VARS-223ENST00000474643 UBXN1Q04323 297 aa15.76■□□□□ 0.11
VARS-223ENST00000474643 NCAPHQ15003 741 aa15.76■□□□□ 0.11
VARS-223ENST00000474643 EIF4HQ15056 248 aaKnown RBP15.76■□□□□ 0.11
VARS-223ENST00000474643 CNGA2Q16280 664 aa15.76■□□□□ 0.11
VARS-223ENST00000474643 FYB2Q5VWT5 728 aa15.76■□□□□ 0.11
VARS-223ENST00000474643 PM20D1Q6GTS8 502 aa15.76■□□□□ 0.11
VARS-223ENST00000474643 LCLAT1Q6UWP7 414 aa15.76■□□□□ 0.11
VARS-223ENST00000474643 SERPINA13PQ6UXR4 307 aa15.76■□□□□ 0.11
VARS-223ENST00000474643 CPXM2Q8N436 756 aa15.76■□□□□ 0.11
VARS-223ENST00000474643 TFAP2BQ92481 460 aa15.76■□□□□ 0.11
VARS-223ENST00000474643 HSPA12BQ96MM6 686 aa15.76■□□□□ 0.11
VARS-223ENST00000474643 SLC2A11Q9BYW1 496 aa15.76■□□□□ 0.11
VARS-223ENST00000474643 SLC32A1Q9H598 525 aa15.76■□□□□ 0.11
VARS-223ENST00000474643 PRDM16Q9HAZ2 1276 aa15.76■□□□□ 0.11
VARS-223ENST00000474643 SIX2Q9NPC8 291 aa15.76■□□□□ 0.11
VARS-223ENST00000474643 ST7Q9NRC1 585 aa15.76■□□□□ 0.11
VARS-223ENST00000474643 SFMBT1Q9UHJ3 866 aa15.76■□□□□ 0.11
VARS-223ENST00000474643 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.76■□□□□ 0.11
VARS-223ENST00000474643 SLC27A6Q9Y2P4 619 aa15.76■□□□□ 0.11
VARS-223ENST00000474643 LAMA1P25391 3075 aa15.75■□□□□ 0.11
VARS-223ENST00000474643 IGHV1OR15-9A0A0B4J2B8 117 aa15.75■□□□□ 0.11
VARS-223ENST00000474643 WASH3PC4AMC7 463 aa15.75■□□□□ 0.11
VARS-223ENST00000474643 CISD3P0C7P0 127 aa15.75■□□□□ 0.11
VARS-223ENST00000474643 GNSP15586 552 aa15.75■□□□□ 0.11
VARS-223ENST00000474643 SLC11A2P49281 568 aa15.75■□□□□ 0.11
VARS-223ENST00000474643 ZNF132P52740 706 aa15.75■□□□□ 0.11
VARS-223ENST00000474643 PTK2Q05397 1052 aa15.75■□□□□ 0.11
VARS-223ENST00000474643 ZNF33AQ06730 810 aa15.75■□□□□ 0.11
VARS-223ENST00000474643 KCNMA1Q12791 1236 aa15.75■□□□□ 0.11
VARS-223ENST00000474643 GEN1Q17RS7 908 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms