RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 GALNT15Q8N3T1 639 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 CNNM3Q8NE01 707 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 C7orf43Q8WVR3 580 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 NKD2Q969F2 451 aaPredicted RBP6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 EDC3Q96F86 508 aaKnown RBP6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 MASTLQ96GX5 879 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 ZNF764Q96H86 408 aaPredicted RBP6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 RPGRIP1Q96KN7 1286 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 C19orf43Q9BQ61 176 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 NUP62CLQ9H1M0 184 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 HSD3B7Q9H2F3 369 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 RC3H2Q9HBD1 1191 aaKnown RBP6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 BATF3Q9NR55 127 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 INTS13Q9NVM9 706 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 WWOXQ9NZC7 414 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 CFAP97Q9P2B7 532 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 GAB2Q9UQC2 676 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 NAALADL1Q9UQQ1 740 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 CLDN16Q9Y5I7 305 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 BZW2Q9Y6E2 419 aaKnown RBP6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 COL4A3Q01955 1670 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 GOLGA8IPA6NC78 632 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 FOXO6A8MYZ6 492 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 F8W8V4 182 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 O00370 1275 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 FFAR2O15552 330 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 EXOC3O60645 756 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 GJB3O75712 270 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 BEST1O76090 585 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 CFBP00751 764 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 AFPP02771 609 aaKnown RBP6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 PABPC4LP0CB38 370 aaKnown RBP6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 CTRB1P17538 263 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 AKAP5P24588 427 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 NUP62P37198 522 aaPredicted RBP6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 POU3F4P49335 361 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 NT5C2P49902 561 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 THOP1P52888 689 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 RAD23AP54725 363 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 GSDMDP57764 484 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 CRHR2Q13324 411 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 CTXN3Q4LDR2 81 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 SEZ6Q53EL9 994 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 FAM209AQ5JX71 171 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 VWA5B1Q5TIE3 1220 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 CTRB2Q6GPI1 263 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 ISLR2Q6UXK2 745 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 CCDC121Q6ZUS5 278 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 THAP5Q7Z6K1 395 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 CADM3Q8N126 398 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 TCAIMQ8N3R3 496 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 FBXW8Q8N3Y1 598 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 CELF5Q8N6W0 485 aaKnown RBP6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 OR9A1PQ8NGU1 263 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 OR2W6PQ8NHA6 318 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 MAIP1Q8WWC4 291 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 RAB7BQ96AH8 199 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 FEM1CQ96JP0 617 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 CCDC77Q9BR77 488 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 PYM1Q9BRP8 204 aaKnown RBP6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 STK33Q9BYT3 514 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 EPS8L2Q9H6S3 715 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 NUDT15Q9NV35 164 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 TMEM39AQ9NV64 488 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 ZNF446Q9NWS9 450 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 GMIPQ9P107 970 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 SRPK3Q9UPE1 567 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 CAMK2AQ9UQM7 478 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 TELO2Q9Y4R8 837 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 ATP23Q9Y6H3 246 aa6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 GCN1Q92616 2671 aaKnown RBP6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 MAP1BP46821 2468 aaKnown RBP6.31□□□□□ -1.4
SMARCE1-208ENST00000474246 SH3TC1Q8TE82 1336 aa6.3□□□□□ -1.4
SMARCE1-208ENST00000474246 NRXN2Q9P2S2 1712 aa6.3□□□□□ -1.4
SMARCE1-208ENST00000474246 PRUNE2Q8WUY3 3088 aa6.3□□□□□ -1.4
SMARCE1-208ENST00000474246 ADM5C9JUS6 153 aa6.3□□□□□ -1.4
SMARCE1-208ENST00000474246 GDF9O60383 454 aa6.3□□□□□ -1.4
SMARCE1-208ENST00000474246 LILRA1O75019 489 aa6.3□□□□□ -1.4
SMARCE1-208ENST00000474246 PFKMP08237 780 aa6.3□□□□□ -1.4
SMARCE1-208ENST00000474246 RALAP11233 206 aa6.3□□□□□ -1.4
SMARCE1-208ENST00000474246 FGFR1P11362 822 aa6.3□□□□□ -1.4
SMARCE1-208ENST00000474246 POU2F1P14859 743 aa6.3□□□□□ -1.4
SMARCE1-208ENST00000474246 CIITAP33076 1130 aa6.3□□□□□ -1.4
SMARCE1-208ENST00000474246 ADD1P35611 737 aaKnown RBP6.3□□□□□ -1.4
SMARCE1-208ENST00000474246 TXLNAP40222 546 aa6.3□□□□□ -1.4
SMARCE1-208ENST00000474246 NBL1P41271 181 aa6.3□□□□□ -1.4
SMARCE1-208ENST00000474246 RABIFP47224 123 aa6.3□□□□□ -1.4
SMARCE1-208ENST00000474246 ZNF41P51814 821 aaPredicted RBP6.3□□□□□ -1.4
SMARCE1-208ENST00000474246 LUMP51884 338 aaPredicted RBP6.3□□□□□ -1.4
SMARCE1-208ENST00000474246 CYP4F2P78329 520 aa6.3□□□□□ -1.4
SMARCE1-208ENST00000474246 CYP4F3Q08477 520 aa6.3□□□□□ -1.4
SMARCE1-208ENST00000474246 GRIK5Q16478 980 aa6.3□□□□□ -1.4
SMARCE1-208ENST00000474246 KYNUQ16719 465 aa6.3□□□□□ -1.4
SMARCE1-208ENST00000474246 HSF5Q4G112 596 aaPredicted RBP6.3□□□□□ -1.4
SMARCE1-208ENST00000474246 COX20Q5RI15 118 aa6.3□□□□□ -1.4
SMARCE1-208ENST00000474246 C12orf60Q5U649 245 aa6.3□□□□□ -1.4
SMARCE1-208ENST00000474246 PIK3R6Q5UE93 754 aa6.3□□□□□ -1.4
SMARCE1-208ENST00000474246 SLC30A9Q6PML9 568 aa6.3□□□□□ -1.4
SMARCE1-208ENST00000474246 TPTE2Q6XPS3 522 aa6.3□□□□□ -1.4
SMARCE1-208ENST00000474246 SYT10Q6XYQ8 523 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms