RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 DLL3Q9NYJ7 618 aa21.31■■□□□ 1
SNX13-206ENST00000474067 PLA2G4CQ9UP65 541 aa21.31■■□□□ 1
SNX13-206ENST00000474067 BECN2A8MW95 431 aa21.3■■□□□ 1
SNX13-206ENST00000474067 PRRT4C9JH25 899 aa21.3■■□□□ 1
SNX13-206ENST00000474067 E5RJQ4 531 aa21.3■■□□□ 1
SNX13-206ENST00000474067 AP5Z1O43299 807 aa21.3■■□□□ 1
SNX13-206ENST00000474067 MSI1O43347 362 aaKnown RBP21.3■■□□□ 1
SNX13-206ENST00000474067 ACSL4O60488 711 aa21.3■■□□□ 1
SNX13-206ENST00000474067 HSF2BPO75031 334 aa21.3■■□□□ 1
SNX13-206ENST00000474067 ADAM23O75077 832 aa21.3■■□□□ 1
SNX13-206ENST00000474067 ATP5BP06576 529 aaKnown RBP21.3■■□□□ 1
SNX13-206ENST00000474067 CDK17Q00537 523 aa21.3■■□□□ 1
SNX13-206ENST00000474067 RSPO4Q2I0M5 234 aaPredicted RBP21.3■■□□□ 1
SNX13-206ENST00000474067 MIIPQ5JXC2 388 aa21.3■■□□□ 1
SNX13-206ENST00000474067 CCDC183Q5T5S1 534 aa21.3■■□□□ 1
SNX13-206ENST00000474067 GJB7Q6PEY0 223 aa21.3■■□□□ 1
SNX13-206ENST00000474067 RABEPKQ7Z6M1 372 aa21.3■■□□□ 1
SNX13-206ENST00000474067 AHI1Q8N157 1196 aa21.3■■□□□ 1
SNX13-206ENST00000474067 HJURPQ8NCD3 748 aaPredicted RBP21.3■■□□□ 1
SNX13-206ENST00000474067 TMEM35BQ8NCS4 154 aa21.3■■□□□ 1
SNX13-206ENST00000474067 C1orf131Q8NDD1 294 aaKnown RBP21.3■■□□□ 1
SNX13-206ENST00000474067 DQX1Q8TE96 717 aaKnown RBP21.3■■□□□ 1
SNX13-206ENST00000474067 CIPCQ9C0C6 399 aa21.3■■□□□ 1
SNX13-206ENST00000474067 ELOVL2Q9NXB9 296 aa21.3■■□□□ 1
SNX13-206ENST00000474067 RRN3Q9NYV6 651 aa21.3■■□□□ 1
SNX13-206ENST00000474067 TJP2Q9UDY2 1190 aa21.3■■□□□ 1
SNX13-206ENST00000474067 EP300Q09472 2414 aaPredicted RBP21.29■■□□□ 1
SNX13-206ENST00000474067 GVINP1Q7Z2Y8 2422 aa21.29■■□□□ 1
SNX13-206ENST00000474067 CREB5Q02930 508 aa21.29■■□□□ 1
SNX13-206ENST00000474067 C11orf57Q6ZUT1 292 aaPredicted RBP21.29■■□□□ 1
SNX13-206ENST00000474067 CYP2U1Q7Z449 544 aa21.29■■□□□ 1
SNX13-206ENST00000474067 SFTPA1Q8IWL2 248 aa21.29■■□□□ 1
SNX13-206ENST00000474067 FAM71AQ8IYT1 594 aa21.29■■□□□ 1
SNX13-206ENST00000474067 ATP6V0D2Q8N8Y2 350 aa21.29■■□□□ 1
SNX13-206ENST00000474067 CLEC4CQ8WTT0 213 aa21.29■■□□□ 1
SNX13-206ENST00000474067 RMDN1Q96DB5 314 aa21.29■■□□□ 1
SNX13-206ENST00000474067 PIWIL1Q96J94 861 aaKnown RBP21.29■■□□□ 1
SNX13-206ENST00000474067 FBRSQ9HAH7 460 aa21.29■■□□□ 1
SNX13-206ENST00000474067 PARD6AQ9NPB6 346 aa21.29■■□□□ 1
SNX13-206ENST00000474067 PLCB1Q9NQ66 1216 aa21.29■■□□□ 1
SNX13-206ENST00000474067 SAMSN1Q9NSI8 373 aaKnown RBP21.29■■□□□ 1
SNX13-206ENST00000474067 POLR3BQ9NW08 1133 aaPredicted RBP21.29■■□□□ 1
SNX13-206ENST00000474067 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.29■■□□□ 1
SNX13-206ENST00000474067 THAP10Q9P2Z0 257 aaPredicted RBP21.29■■□□□ 1
SNX13-206ENST00000474067 PAXBP1Q9Y5B6 917 aa21.29■■□□□ 1
SNX13-206ENST00000474067 SPAG17Q6Q759 2223 aa21.29■■□□□ 1
SNX13-206ENST00000474067 CHRM1P11229 460 aaPredicted RBP21.28■■□□□ 1
SNX13-206ENST00000474067 TGM1P22735 817 aa21.28■■□□□ 1
SNX13-206ENST00000474067 HOXD9P28356 352 aaPredicted RBP21.28■■□□□ 1
SNX13-206ENST00000474067 HOXD12P35452 270 aa21.28■■□□□ 1
SNX13-206ENST00000474067 MYL5Q02045 173 aa21.28■■□□□ 1
SNX13-206ENST00000474067 DRAP1Q14919 205 aaPredicted RBP21.28■■□□□ 1
SNX13-206ENST00000474067 HSP90AA4PQ58FG1 418 aa21.28■■□□□ 1
SNX13-206ENST00000474067 KLHDC7AQ5VTJ3 777 aa21.28■■□□□ 1
SNX13-206ENST00000474067 GPT2Q8TD30 523 aa21.28■■□□□ 1
SNX13-206ENST00000474067 BTN2A3PQ96KV6 586 aa21.28■■□□□ 1
SNX13-206ENST00000474067 PPP1R9BQ96SB3 815 aa21.28■■□□□ 1
SNX13-206ENST00000474067 STK33Q9BYT3 514 aa21.28■■□□□ 1
SNX13-206ENST00000474067 SIX2Q9NPC8 291 aa21.28■■□□□ 1
SNX13-206ENST00000474067 STON1Q9Y6Q2 735 aa21.28■■□□□ 1
SNX13-206ENST00000474067 RALGAPA1Q6GYQ0 2036 aa21.28■■□□□ 1
SNX13-206ENST00000474067 BCLAF3A2AJT9 711 aaKnown RBP21.27■■□□□ 1
SNX13-206ENST00000474067 FOXN3O00409 490 aaPredicted RBP21.27■■□□□ 1
SNX13-206ENST00000474067 TRIM24O15164 1050 aa21.27■■□□□ 1
SNX13-206ENST00000474067 PAPSS1O43252 624 aaPredicted RBP21.27■■□□□ 1
SNX13-206ENST00000474067 MOCS3O95396 460 aa21.27■■□□□ 1
SNX13-206ENST00000474067 CAVIN2O95810 425 aa21.27■■□□□ 1
SNX13-206ENST00000474067 UCHL3P15374 230 aa21.27■■□□□ 1
SNX13-206ENST00000474067 ABCB4P21439 1286 aa21.27■■□□□ 1
SNX13-206ENST00000474067 OXCT1P55809 520 aa21.27■■□□□ 1
SNX13-206ENST00000474067 ACBD5Q5T8D3 534 aaPredicted RBP21.27■■□□□ 1
SNX13-206ENST00000474067 PIK3R6Q5UE93 754 aa21.27■■□□□ 1
SNX13-206ENST00000474067 TTC39BQ5VTQ0 682 aaPredicted RBP21.27■■□□□ 1
SNX13-206ENST00000474067 SERPINA13PQ6UXR4 307 aa21.27■■□□□ 1
SNX13-206ENST00000474067 ZNF677Q86XU0 584 aa21.27■■□□□ 1
SNX13-206ENST00000474067 MFN1Q8IWA4 741 aa21.27■■□□□ 1
SNX13-206ENST00000474067 LSM14BQ9BX40 385 aaKnown RBP21.27■■□□□ 1
SNX13-206ENST00000474067 CACNA2D2Q9NY47 1150 aa21.27■■□□□ 1
SNX13-206ENST00000474067 NAALADL1Q9UQQ1 740 aa21.27■■□□□ 1
SNX13-206ENST00000474067 VPS13AQ96RL7 3174 aa21.27■■□□□ 1
SNX13-206ENST00000474067 A0A1W2PQF6 199 aa21.26■□□□□ 0.99
SNX13-206ENST00000474067 TSPAN3O60637 253 aa21.26■□□□□ 0.99
SNX13-206ENST00000474067 GABBR2O75899 941 aa21.26■□□□□ 0.99
SNX13-206ENST00000474067 LSM8O95777 96 aaKnown RBP21.26■□□□□ 0.99
SNX13-206ENST00000474067 TRUB2O95900 331 aaKnown RBP21.26■□□□□ 0.99
SNX13-206ENST00000474067 CALCAP01258 141 aa21.26■□□□□ 0.99
SNX13-206ENST00000474067 GABRG2P18507 467 aa21.26■□□□□ 0.99
SNX13-206ENST00000474067 CDK11BP21127 795 aaKnown RBP21.26■□□□□ 0.99
SNX13-206ENST00000474067 CCR1P32246 355 aa21.26■□□□□ 0.99
SNX13-206ENST00000474067 DHPSP49366 369 aaPredicted RBP21.26■□□□□ 0.99
SNX13-206ENST00000474067 LIMK1P53667 647 aa21.26■□□□□ 0.99
SNX13-206ENST00000474067 GEN1Q17RS7 908 aa21.26■□□□□ 0.99
SNX13-206ENST00000474067 DCAF6Q58WW2 860 aa21.26■□□□□ 0.99
SNX13-206ENST00000474067 PLA2G2CQ5R387 149 aa21.26■□□□□ 0.99
SNX13-206ENST00000474067 CDKAL1Q5VV42 579 aa21.26■□□□□ 0.99
SNX13-206ENST00000474067 IL31Q6EBC2 164 aa21.26■□□□□ 0.99
SNX13-206ENST00000474067 METTL3Q86U44 580 aaKnown RBP21.26■□□□□ 0.99
SNX13-206ENST00000474067 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.26■□□□□ 0.99
SNX13-206ENST00000474067 RNF34Q969K3 372 aa21.26■□□□□ 0.99
SNX13-206ENST00000474067 SLC39A13Q96H72 371 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms