RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 GPR158Q5T848 1215 aa10.64□□□□□ -0.71
PRPF38A-202ENST00000474048 DCAF12L1Q5VU92 463 aa10.64□□□□□ -0.71
PRPF38A-202ENST00000474048 CES5AQ6NT32 575 aa10.64□□□□□ -0.71
PRPF38A-202ENST00000474048 RWDD4Q6NW29 188 aaKnown RBP10.64□□□□□ -0.71
PRPF38A-202ENST00000474048 MFSD7Q6UXD7 560 aa10.64□□□□□ -0.71
PRPF38A-202ENST00000474048 GSTA5Q7RTV2 222 aa10.64□□□□□ -0.71
PRPF38A-202ENST00000474048 CHSY1Q86X52 802 aa10.64□□□□□ -0.71
PRPF38A-202ENST00000474048 CREG2Q8IUH2 290 aa10.64□□□□□ -0.71
PRPF38A-202ENST00000474048 CCDC105Q8IYK2 499 aa10.64□□□□□ -0.71
PRPF38A-202ENST00000474048 CMASQ8NFW8 434 aaPredicted RBP10.64□□□□□ -0.71
PRPF38A-202ENST00000474048 GRK7Q8WTQ7 553 aa10.64□□□□□ -0.71
PRPF38A-202ENST00000474048 RAPGEF5Q92565 580 aa10.64□□□□□ -0.71
PRPF38A-202ENST00000474048 P3H4Q92791 437 aa10.64□□□□□ -0.71
PRPF38A-202ENST00000474048 TBC1D31Q96DN5 1066 aa10.64□□□□□ -0.71
PRPF38A-202ENST00000474048 HAPLN3Q96S86 360 aa10.64□□□□□ -0.71
PRPF38A-202ENST00000474048 AP1M1Q9BXS5 423 aa10.64□□□□□ -0.71
PRPF38A-202ENST00000474048 FRMD8P1Q9BZ68 369 aaPredicted RBP10.64□□□□□ -0.71
PRPF38A-202ENST00000474048 PCDH18Q9HCL0 1135 aa10.64□□□□□ -0.71
PRPF38A-202ENST00000474048 ZNF334Q9HCZ1 680 aaPredicted RBP10.64□□□□□ -0.71
PRPF38A-202ENST00000474048 OSER1Q9NX31 292 aa10.64□□□□□ -0.71
PRPF38A-202ENST00000474048 EFR3BQ9Y2G0 817 aa10.64□□□□□ -0.71
PRPF38A-202ENST00000474048 MRPS23Q9Y3D9 190 aaKnown RBP10.64□□□□□ -0.71
PRPF38A-202ENST00000474048 hCG_1818297A0A087WSY0 165 aa10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 KCNU1A8MYU2 1149 aa10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 F5H5T6 163 aa10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 RFXAPO00287 272 aa10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 FGF10O15520 208 aaPredicted RBP10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 CST8O60676 142 aa10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 ZNF189O75820 626 aaPredicted RBP10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 GAS8O95995 478 aa10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 IGLV3-25P01717 112 aa10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 F11P03951 625 aa10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 POU2F2P09086 479 aa10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 TGM2P21980 687 aa10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 EPHB2P29323 1055 aa10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 CHRNA3P32297 505 aa10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 ACTN2P35609 894 aa10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 CDKN2BP42772 138 aa10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 ITIH3Q06033 890 aa10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 DPYSL3Q14195 570 aa10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 LLGL1Q15334 1064 aa10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 ANKRD20A8PQ5CZ79 823 aa10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 TCEAL5Q5H9L2 206 aa10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 RABGAP1LQ5R372 815 aa10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 RARS2Q5T160 578 aaKnown RBP10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 OTUD1Q5VV17 481 aaPredicted RBP10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 TXNRD3NBQ6F5E7 133 aa10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 TMCO3Q6UWJ1 677 aa10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 MAATS1Q7Z4T9 603 aa10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 GRASPQ7Z6J2 395 aaPredicted RBP10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 KLHL7Q8IXQ5 586 aa10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 HS6ST3Q8IZP7 471 aa10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 MICALL1Q8N3F8 863 aa10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 ARFGAP1Q8N6T3 406 aa10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 MAB21L3Q8N8X9 362 aa10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 SPATA4Q8NEY3 305 aa10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 MAGOHBQ96A72 148 aaKnown RBP10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 KCTD15Q96SI1 283 aaPredicted RBP10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 PRDM12Q9H4Q4 367 aa10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 WDR6Q9NNW5 1121 aaKnown RBP10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 SMPD4Q9NXE4 827 aa10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 ARHGEF38Q9NXL2 777 aa10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 OR12D3Q9UGF7 316 aa10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 ZNF510Q9Y2H8 683 aa10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 OBSL1O75147 1896 aa10.63□□□□□ -0.71
PRPF38A-202ENST00000474048 C2orf78A6NCI8 922 aa10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 EPOPA6NHQ4 379 aa10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 SOBPA7XYQ1 873 aa10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 APOC4-APOC2K7ER74 178 aa10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 PHF2O75151 1096 aa10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 PAGE1O75459 146 aa10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 NEBLO76041 1014 aa10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 STK10O94804 968 aaKnown RBP10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 TBX18O95935 607 aa10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 OAS1P00973 400 aaKnown RBP10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 APOC2P02655 101 aa10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 KRT10P13645 584 aa10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 HOXB8P17481 243 aaPredicted RBP10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 MCM3P25205 808 aa10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 CORO1AP31146 461 aaKnown RBP10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 L1CAMP32004 1257 aa10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 RAB6CQ53S08 254 aa10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 TXNDC8Q6A555 127 aa10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 AADACL2Q6P093 401 aa10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 TMC5Q6UXY8 1006 aa10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 RFX8Q6ZV50 586 aa10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 BBS12Q6ZW61 710 aa10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 BNIPLQ7Z465 357 aa10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 ZNF354CQ86Y25 554 aa10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 TMC8Q8IU68 726 aa10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 EFHBQ8N7U6 833 aa10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 ARL14EPQ8N8R7 260 aaPredicted RBP10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 FCRL2Q96LA5 508 aaPredicted RBP10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 RIPOR3Q96MK2 946 aa10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 RPRD1AQ96P16 312 aaPredicted RBP10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 CSPG4P5Q96PW8 444 aa10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 RNF157Q96PX1 679 aa10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 KRT12Q99456 494 aa10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 RAB6CQ9H0N0 254 aa10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 OSBPL2Q9H1P3 480 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms