RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 RAB23Q9ULC3 237 aa14.78□□□□□ -0.04
VAMP4-203ENST00000474047 GOLGA8SH3BPF8 625 aa14.78□□□□□ -0.04
VAMP4-203ENST00000474047 ZBTB24O43167 697 aaPredicted RBP14.78□□□□□ -0.04
VAMP4-203ENST00000474047 PENKP01210 267 aaPredicted RBP14.78□□□□□ -0.04
VAMP4-203ENST00000474047 IGLV3-27P01718 113 aa14.78□□□□□ -0.04
VAMP4-203ENST00000474047 SLC2A3P11169 496 aa14.78□□□□□ -0.04
VAMP4-203ENST00000474047 FERP16591 822 aa14.78□□□□□ -0.04
VAMP4-203ENST00000474047 HOXA6P31267 233 aa14.78□□□□□ -0.04
VAMP4-203ENST00000474047 PXNP49023 591 aaPredicted RBP14.78□□□□□ -0.04
VAMP4-203ENST00000474047 ZC3H12AQ5D1E8 599 aaKnown RBP14.78□□□□□ -0.04
VAMP4-203ENST00000474047 FAM102AQ5T9C2 384 aaPredicted RBP14.78□□□□□ -0.04
VAMP4-203ENST00000474047 FYB2Q5VWT5 728 aa14.78□□□□□ -0.04
VAMP4-203ENST00000474047 CCDC117Q8IWD4 279 aaPredicted RBP14.78□□□□□ -0.04
VAMP4-203ENST00000474047 FAM217AQ8IXS0 508 aa14.78□□□□□ -0.04
VAMP4-203ENST00000474047 PHTF2Q8N3S3 785 aa14.78□□□□□ -0.04
VAMP4-203ENST00000474047 ATP6V0D2Q8N8Y2 350 aa14.78□□□□□ -0.04
VAMP4-203ENST00000474047 TXNDC5Q8NBS9 432 aaKnown RBP14.78□□□□□ -0.04
VAMP4-203ENST00000474047 KCNV2Q8TDN2 545 aa14.78□□□□□ -0.04
VAMP4-203ENST00000474047 NELL1Q92832 810 aa14.78□□□□□ -0.04
VAMP4-203ENST00000474047 AZIN2Q96A70 460 aa14.78□□□□□ -0.04
VAMP4-203ENST00000474047 FCRL2Q96LA5 508 aaPredicted RBP14.78□□□□□ -0.04
VAMP4-203ENST00000474047 SLC2A13Q96QE2 648 aa14.78□□□□□ -0.04
VAMP4-203ENST00000474047 HINFPQ9BQA5 517 aa14.78□□□□□ -0.04
VAMP4-203ENST00000474047 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.78□□□□□ -0.04
VAMP4-203ENST00000474047 MMP17Q9ULZ9 603 aa14.78□□□□□ -0.04
VAMP4-203ENST00000474047 A0A1B0GTH6 734 aa14.77□□□□□ -0.05
VAMP4-203ENST00000474047 GOLGA6L7A0A1B0GV03 622 aa14.77□□□□□ -0.05
VAMP4-203ENST00000474047 IRAK2O43187 625 aa14.77□□□□□ -0.05
VAMP4-203ENST00000474047 DAB1O75553 588 aa14.77□□□□□ -0.05
VAMP4-203ENST00000474047 ALDH1A2O94788 518 aa14.77□□□□□ -0.05
VAMP4-203ENST00000474047 APBB3O95704 486 aa14.77□□□□□ -0.05
VAMP4-203ENST00000474047 TDGF1P13385 188 aa14.77□□□□□ -0.05
VAMP4-203ENST00000474047 ABCB4P21439 1286 aa14.77□□□□□ -0.05
VAMP4-203ENST00000474047 NOS2P35228 1153 aa14.77□□□□□ -0.05
VAMP4-203ENST00000474047 NOMO3P69849 1222 aa14.77□□□□□ -0.05
VAMP4-203ENST00000474047 FANCCQ00597 558 aa14.77□□□□□ -0.05
VAMP4-203ENST00000474047 DMWDQ09019 674 aa14.77□□□□□ -0.05
VAMP4-203ENST00000474047 NME3Q13232 169 aa14.77□□□□□ -0.05
VAMP4-203ENST00000474047 RFWD3Q6PCD5 774 aa14.77□□□□□ -0.05
VAMP4-203ENST00000474047 PRR23BQ6ZRT6 265 aa14.77□□□□□ -0.05
VAMP4-203ENST00000474047 CEP68Q76N32 757 aa14.77□□□□□ -0.05
VAMP4-203ENST00000474047 SND1Q7KZF4 910 aaKnown RBP eCLIP14.77□□□□□ -0.05
VAMP4-203ENST00000474047 SLC26A9Q7LBE3 791 aa14.77□□□□□ -0.05
VAMP4-203ENST00000474047 IL17RCQ8NAC3 791 aa14.77□□□□□ -0.05
VAMP4-203ENST00000474047 UCMAQ8WVF2 138 aa14.77□□□□□ -0.05
VAMP4-203ENST00000474047 NAP1L5Q96NT1 182 aaPredicted RBP14.77□□□□□ -0.05
VAMP4-203ENST00000474047 SLC2A11Q9BYW1 496 aa14.77□□□□□ -0.05
VAMP4-203ENST00000474047 POLMQ9NP87 494 aaPredicted RBP14.77□□□□□ -0.05
VAMP4-203ENST00000474047 ZDHHC4Q9NPG8 344 aa14.77□□□□□ -0.05
VAMP4-203ENST00000474047 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.77□□□□□ -0.05
VAMP4-203ENST00000474047 STIM2Q9P246 746 aa14.77□□□□□ -0.05
VAMP4-203ENST00000474047 STOML2Q9UJZ1 356 aa14.77□□□□□ -0.05
VAMP4-203ENST00000474047 STAP1Q9ULZ2 295 aa14.77□□□□□ -0.05
VAMP4-203ENST00000474047 PRR23AA6NEV1 266 aa14.76□□□□□ -0.05
VAMP4-203ENST00000474047 M0QYT0 321 aa14.76□□□□□ -0.05
VAMP4-203ENST00000474047 TBL1XO60907 577 aa14.76□□□□□ -0.05
VAMP4-203ENST00000474047 CISD3P0C7P0 127 aa14.76□□□□□ -0.05
VAMP4-203ENST00000474047 CCR1P32246 355 aa14.76□□□□□ -0.05
VAMP4-203ENST00000474047 CNR2P34972 360 aa14.76□□□□□ -0.05
VAMP4-203ENST00000474047 MATKP42679 507 aa14.76□□□□□ -0.05
VAMP4-203ENST00000474047 KIR2DL1P43626 348 aaPredicted RBP14.76□□□□□ -0.05
VAMP4-203ENST00000474047 NSFP46459 744 aaKnown RBP14.76□□□□□ -0.05
VAMP4-203ENST00000474047 GABRB2P47870 512 aa14.76□□□□□ -0.05
VAMP4-203ENST00000474047 DGKEP52429 567 aa14.76□□□□□ -0.05
VAMP4-203ENST00000474047 UBASH3AP57075 661 aa14.76□□□□□ -0.05
VAMP4-203ENST00000474047 FMO1Q01740 532 aa14.76□□□□□ -0.05
VAMP4-203ENST00000474047 E2F5Q15329 346 aa14.76□□□□□ -0.05
VAMP4-203ENST00000474047 C2CD6Q53TS8 623 aa14.76□□□□□ -0.05
VAMP4-203ENST00000474047 ASCL5Q7RTU5 278 aa14.76□□□□□ -0.05
VAMP4-203ENST00000474047 WDR5BQ86VZ2 330 aa14.76□□□□□ -0.05
VAMP4-203ENST00000474047 XYLT1Q86Y38 959 aa14.76□□□□□ -0.05
VAMP4-203ENST00000474047 CHPFQ8IZ52 775 aa14.76□□□□□ -0.05
VAMP4-203ENST00000474047 ZNF397Q8NF99 534 aaPredicted RBP14.76□□□□□ -0.05
VAMP4-203ENST00000474047 SLC39A13Q96H72 371 aa14.76□□□□□ -0.05
VAMP4-203ENST00000474047 BTN2A3PQ96KV6 586 aa14.76□□□□□ -0.05
VAMP4-203ENST00000474047 RRN3Q9NYV6 651 aa14.76□□□□□ -0.05
VAMP4-203ENST00000474047 KIAA1549LQ6ZVL6 1849 aa14.76□□□□□ -0.05
VAMP4-203ENST00000474047 A0A1W2PQC6 194 aa14.75□□□□□ -0.05
VAMP4-203ENST00000474047 ANTXRLA6NF34 631 aa14.75□□□□□ -0.05
VAMP4-203ENST00000474047 AXIN1O15169 862 aa14.75□□□□□ -0.05
VAMP4-203ENST00000474047 LILRB5O75023 590 aa14.75□□□□□ -0.05
VAMP4-203ENST00000474047 CHRNB2P17787 502 aa14.75□□□□□ -0.05
VAMP4-203ENST00000474047 WASP42768 502 aa14.75□□□□□ -0.05
VAMP4-203ENST00000474047 PITX1P78337 314 aaPredicted RBP14.75□□□□□ -0.05
VAMP4-203ENST00000474047 SIM2Q14190 667 aaPredicted RBP14.75□□□□□ -0.05
VAMP4-203ENST00000474047 NR1I3Q14994 352 aa14.75□□□□□ -0.05
VAMP4-203ENST00000474047 CRY1Q16526 586 aa14.75□□□□□ -0.05
VAMP4-203ENST00000474047 PIK3R6Q5UE93 754 aa14.75□□□□□ -0.05
VAMP4-203ENST00000474047 MMS22LQ6ZRQ5 1243 aa14.75□□□□□ -0.05
VAMP4-203ENST00000474047 ANKS1BQ7Z6G8 1248 aa14.75□□□□□ -0.05
VAMP4-203ENST00000474047 PGBD3Q8N328 593 aa14.75□□□□□ -0.05
VAMP4-203ENST00000474047 HJURPQ8NCD3 748 aaPredicted RBP14.75□□□□□ -0.05
VAMP4-203ENST00000474047 SLC30A5Q8TAD4 765 aa14.75□□□□□ -0.05
VAMP4-203ENST00000474047 AGPAT1Q99943 283 aa14.75□□□□□ -0.05
VAMP4-203ENST00000474047 IRX2Q9BZI1 471 aaPredicted RBP14.75□□□□□ -0.05
VAMP4-203ENST00000474047 TSPY26PQ9H489 355 aa14.75□□□□□ -0.05
VAMP4-203ENST00000474047 BCCIPQ9P287 314 aaKnown RBP eCLIP14.75□□□□□ -0.05
VAMP4-203ENST00000474047 FBXO10Q9UK96 956 aa14.75□□□□□ -0.05
VAMP4-203ENST00000474047 MYO6Q9UM54 1294 aa14.75□□□□□ -0.05
VAMP4-203ENST00000474047 SLC27A6Q9Y2P4 619 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms