RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 FAM84AQ96KN4 292 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 MCEEQ96PE7 176 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 CCT8L2Q96SF2 557 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 PCYT2Q99447 389 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 PLCD4Q9BRC7 762 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 ASPNQ9BXN1 380 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 MAK16Q9BXY0 300 aaKnown RBP6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 KRTAP4-11Q9BYQ6 195 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 TXLNGYQ9BZA5 131 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 NEUROG2Q9H2A3 272 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 LHX5Q9H2C1 402 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 ACTR5Q9H9F9 607 aaPredicted RBP6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 IFT122Q9HBG6 1241 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 APOBEC3GQ9HC16 384 aaKnown RBP6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 ACP6Q9NPH0 428 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 PPANQ9NQ55 473 aaKnown RBP6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 INTS9Q9NV88 658 aaKnown RBP6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 ASNSD1Q9NWL6 643 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 NKIRAS1Q9NYS0 192 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 GRHL1Q9NZI5 618 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 CHORDC1Q9UHD1 332 aaPredicted RBP6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 CPSF3Q9UKF6 684 aaKnown RBP6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 ITGA11Q9UKX5 1188 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 FZD1Q9UP38 647 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 ZNF148Q9UQR1 794 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 AKT3Q9Y243 479 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 SLC45A1Q9Y2W3 748 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 NFS1Q9Y697 457 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 FAM169AQ9Y6X4 670 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 GRIN2DO15399 1336 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 A0A0G2JMZ2 1700 aa6.16□□□□□ -1.42
ATPAF1-204ENST00000474020 DNAJC25-GNG10A0A024R161 153 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 TMEM191CA6NGB0 347 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 RRN3P2A6NIE6 340 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 XPOTO43592 962 aaKnown RBP6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 CNMDO75829 334 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 TTC4O95801 387 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 LGALS2P05162 132 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 HOXC6P09630 235 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 VDRP11473 427 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 KRT3P12035 628 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 FGFR4P22455 802 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 CDH5P33151 784 aaPredicted RBP6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 EPHX2P34913 555 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 GTF2A2P52657 109 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 ITGA8P53708 1063 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 PSMC1P62191 440 aaKnown RBP6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 IGBP1P78318 339 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 MBTD1Q05BQ5 628 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 MESP2Q0VG99 397 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 TFDP2Q14188 446 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 SLC29A2Q14542 456 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 ZNF268Q14587 947 aaPredicted RBP6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 TMEM132DQ14C87 1099 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 MORF4L2Q15014 288 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 WDR72Q3MJ13 1102 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 TTC31Q49AM3 519 aaPredicted RBP6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 RALGPS1Q5JS13 557 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 MFSD5Q6N075 450 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 AADACL2Q6P093 401 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 TTC27Q6P3X3 843 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 PPP1R21Q6ZMI0 780 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 ARHGEF18Q6ZSZ5 1173 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 CENPUQ71F23 418 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 ARMCX2Q7L311 632 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 PHLDB2Q86SQ0 1253 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 PNMA8AQ86V59 439 aaPredicted RBP6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 ZNF410Q86VK4 478 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 TAX1BP1Q86VP1 789 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 TSPYL5Q86VY4 417 aaPredicted RBP6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 C10orf67Q8IYJ2 551 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 PHACTR4Q8IZ21 702 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 ZCCHC9Q8N567 271 aaKnown RBP6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 NIPA2Q8N8Q9 360 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 OR5B17Q8NGF7 314 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 PPTC7Q8NI37 304 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 MYCBPAPQ8TBZ2 947 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 FNIP1Q8TF40 1166 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 ZNF526Q8TF50 670 aaPredicted RBP6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 RSAD2Q8WXG1 361 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 TLCD1Q96CP7 247 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 CABS1Q96KC9 395 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 ACAP3Q96P50 834 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 HEMGNQ9BXL5 484 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 CDT1Q9H211 546 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 FZD8Q9H461 694 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 SENP1Q9P0U3 644 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 DUSP13Q9UII6 198 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 GGT7Q9UJ14 662 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 SHOC2Q9UQ13 582 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 DRG1Q9Y295 367 aaKnown RBP6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 EFR3BQ9Y2G0 817 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 C2CD2Q9Y426 696 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 NR2E1Q9Y466 385 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 WDR90Q96KV7 1748 aa6.15□□□□□ -1.42
ATPAF1-204ENST00000474020 RLFQ13129 1914 aa6.15□□□□□ -1.43
ATPAF1-204ENST00000474020 MYH9P35579 1960 aaKnown RBP6.15□□□□□ -1.43
ATPAF1-204ENST00000474020 SIGLEC16A6NMB1 481 aa6.14□□□□□ -1.43
ATPAF1-204ENST00000474020 GOLGA8SH3BPF8 625 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms