RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 WEE2P0C1S8 567 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 ATP1A3P13637 1013 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 PTGS2P35354 604 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 IGHMBP2P38935 993 aaKnown RBP4.71□□□□□ -1.66
BRCA1-212ENST00000473961 PDE1AP54750 535 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 NR1H2P55055 460 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 RPP30P78346 268 aaKnown RBP4.71□□□□□ -1.66
BRCA1-212ENST00000473961 MTAPQ13126 283 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 BMPR2Q13873 1038 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 TBCCQ15814 346 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 TIGD2Q4W5G0 525 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 TREML2Q5T2D2 321 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 CCDC30Q5VVM6 783 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 DENND1BQ6P3S1 775 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 TMEM88Q6PEY1 159 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 SYNE3Q6ZMZ3 975 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 NEK10Q6ZWH5 1172 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 FASTKD5Q7L8L6 764 aaKnown RBP4.71□□□□□ -1.66
BRCA1-212ENST00000473961 OR4N4Q8N0Y3 316 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 LNX2Q8N448 690 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 ZNF276Q8N554 614 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 METTL25Q8N6Q8 603 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 PNPLA1Q8N8W4 532 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 ADPRHL1Q8NDY3 354 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 TDRD7Q8NHU6 1098 aaKnown RBP4.71□□□□□ -1.66
BRCA1-212ENST00000473961 RP9Q8TA86 221 aaKnown RBP4.71□□□□□ -1.66
BRCA1-212ENST00000473961 MYCBPAPQ8TBZ2 947 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 SSH3Q8TE77 659 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 SH3RF3Q8TEJ3 882 aaPredicted RBP4.71□□□□□ -1.66
BRCA1-212ENST00000473961 SLC25A43Q8WUT9 341 aaPredicted RBP4.71□□□□□ -1.66
BRCA1-212ENST00000473961 CENPIQ92674 756 aaPredicted RBP4.71□□□□□ -1.66
BRCA1-212ENST00000473961 R3HDM4Q96D70 268 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 RNF125Q96EQ8 232 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 TEX101Q9BY14 249 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 ACAD9Q9H845 621 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 VEZTQ9HBM0 779 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 KRT84Q9NSB2 600 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 PPP1R14DQ9NXH3 145 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 TNFRSF18Q9Y5U5 241 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 CYP46A1Q9Y6A2 500 aa4.71□□□□□ -1.66
BRCA1-212ENST00000473961 TDRD9Q8NDG6 1382 aaKnown RBP4.7□□□□□ -1.66
BRCA1-212ENST00000473961 TTC34A8MYJ7 566 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 PEX12O00623 359 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 MUSKO15146 869 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 FIBPO43427 364 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 PEX1O43933 1283 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 CCNT1O60563 726 aaKnown RBP4.7□□□□□ -1.66
BRCA1-212ENST00000473961 FAM20BO75063 409 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 TULP3O75386 442 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 PEX11BO96011 259 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 HSPA1AP0DMV8 641 aaKnown RBP4.7□□□□□ -1.66
BRCA1-212ENST00000473961 HSPA1BP0DMV9 641 aaKnown RBP4.7□□□□□ -1.66
BRCA1-212ENST00000473961 MYCLP12524 364 aaPredicted RBP4.7□□□□□ -1.66
BRCA1-212ENST00000473961 RCAN1P53805 252 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 ARF3P61204 181 aaPredicted RBP4.7□□□□□ -1.66
BRCA1-212ENST00000473961 DCAF7P61962 342 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 ARF1P84077 181 aaKnown RBP4.7□□□□□ -1.66
BRCA1-212ENST00000473961 CCDC15Q0P6D6 951 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 KLF10Q13118 480 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 FHL3Q13643 280 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 CAMK1Q14012 370 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 DCTN1Q14203 1278 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 SF3B3Q15393 1217 aaKnown RBP4.7□□□□□ -1.66
BRCA1-212ENST00000473961 ERCC6LQ2NKX8 1250 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 RUNDC3AQ59EK9 446 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 ZNF484Q5JVG2 852 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 CBWD5Q5RIA9 395 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.7□□□□□ -1.66
BRCA1-212ENST00000473961 VWA1Q6PCB0 445 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 PTCHD4Q6ZW05 846 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 WDR53Q7Z5U6 358 aaPredicted RBP4.7□□□□□ -1.66
BRCA1-212ENST00000473961 ZNF575Q86XF7 245 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 SRFBP1Q8NEF9 429 aaKnown RBP4.7□□□□□ -1.66
BRCA1-212ENST00000473961 OR52L2PQ8NGH6 319 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 ZCCHC10Q8TBK6 192 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 GLMPQ8WWB7 406 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 STAMQ92783 540 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 FBXL20Q96IG2 436 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 LOXL4Q96JB6 756 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 PBKQ96KB5 322 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 CD180Q99467 661 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 NUDT16L1Q9BRJ7 211 aaKnown RBP4.7□□□□□ -1.66
BRCA1-212ENST00000473961 MECRQ9BV79 373 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 SSBP3Q9BWW4 388 aaPredicted RBP4.7□□□□□ -1.66
BRCA1-212ENST00000473961 AGXT2Q9BYV1 514 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 PLEKHA2Q9HB19 425 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 PDE11AQ9HCR9 933 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 ALKBH4Q9NXW9 302 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 NSMCE4AQ9NXX6 385 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 ORC3Q9UBD5 711 aaPredicted RBP4.7□□□□□ -1.66
BRCA1-212ENST00000473961 MGAT4CQ9UBM8 478 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 ING1Q9UK53 422 aaPredicted RBP4.7□□□□□ -1.66
BRCA1-212ENST00000473961 AMFRQ9UKV5 643 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 TRPC5Q9UL62 973 aaPredicted RBP4.7□□□□□ -1.66
BRCA1-212ENST00000473961 ENTPD2Q9Y5L3 495 aa4.7□□□□□ -1.66
BRCA1-212ENST00000473961 FSD2A1L4K1 749 aa4.69□□□□□ -1.66
BRCA1-212ENST00000473961 CES2O00748 559 aa4.69□□□□□ -1.66
BRCA1-212ENST00000473961 ZNF213O14771 459 aa4.69□□□□□ -1.66
BRCA1-212ENST00000473961 YY2O15391 372 aa4.69□□□□□ -1.66
BRCA1-212ENST00000473961 SCGB1D1O95968 90 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms