RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 C8orf82Q6P1X6 216 aaPredicted RBP2.34□□□□□ -2.03
CCDC39-203ENST00000473854 LRIG3Q6UXM1 1119 aa2.34□□□□□ -2.03
CCDC39-203ENST00000473854 MEX3BQ6ZN04 569 aaKnown RBP2.34□□□□□ -2.03
CCDC39-203ENST00000473854 Q6ZTK2 550 aa2.34□□□□□ -2.03
CCDC39-203ENST00000473854 DDIASQ8IXT1 998 aa2.34□□□□□ -2.03
CCDC39-203ENST00000473854 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.34□□□□□ -2.03
CCDC39-203ENST00000473854 FAM47BQ8NA70 645 aa2.34□□□□□ -2.03
CCDC39-203ENST00000473854 SMCR8Q8TEV9 937 aaPredicted RBP2.34□□□□□ -2.03
CCDC39-203ENST00000473854 ABHD16BQ9H3Z7 469 aa2.34□□□□□ -2.03
CCDC39-203ENST00000473854 PLEKHB1Q9UF11 243 aaPredicted RBP2.34□□□□□ -2.03
CCDC39-203ENST00000473854 PTGDR2Q9Y5Y4 395 aa2.34□□□□□ -2.03
CCDC39-203ENST00000473854 EMSYQ7Z589 1322 aa2.34□□□□□ -2.04
CCDC39-203ENST00000473854 BICRAQ9NZM4 1560 aa2.33□□□□□ -2.04
CCDC39-203ENST00000473854 IGKV6D-41A0A0C4DH26 115 aa2.33□□□□□ -2.04
CCDC39-203ENST00000473854 LOC102723971A0A1B0GUV8 181 aa2.33□□□□□ -2.04
CCDC39-203ENST00000473854 RGS14O43566 566 aa2.33□□□□□ -2.04
CCDC39-203ENST00000473854 AP1G1O43747 822 aa2.33□□□□□ -2.04
CCDC39-203ENST00000473854 SNX2O60749 519 aa2.33□□□□□ -2.04
CCDC39-203ENST00000473854 BAG4O95429 457 aaKnown RBP2.33□□□□□ -2.04
CCDC39-203ENST00000473854 DAOP14920 347 aa2.33□□□□□ -2.04
CCDC39-203ENST00000473854 DUSP1P28562 367 aa2.33□□□□□ -2.04
CCDC39-203ENST00000473854 VPS41P49754 854 aa2.33□□□□□ -2.04
CCDC39-203ENST00000473854 CRIP2P52943 208 aaPredicted RBP2.33□□□□□ -2.04
CCDC39-203ENST00000473854 GPS2Q13227 327 aa2.33□□□□□ -2.04
CCDC39-203ENST00000473854 ABCB5Q2M3G0 1257 aa2.33□□□□□ -2.04
CCDC39-203ENST00000473854 AASDHQ4L235 1098 aaPredicted RBP2.33□□□□□ -2.04
CCDC39-203ENST00000473854 TTC39AQ5SRH9 613 aa2.33□□□□□ -2.04
CCDC39-203ENST00000473854 LIPMQ5VYY2 423 aa2.33□□□□□ -2.04
CCDC39-203ENST00000473854 RHBDF2Q6PJF5 856 aa2.33□□□□□ -2.04
CCDC39-203ENST00000473854 MPP5Q8N3R9 675 aa2.33□□□□□ -2.04
CCDC39-203ENST00000473854 EME1Q96AY2 570 aa2.33□□□□□ -2.04
CCDC39-203ENST00000473854 SLC13A1Q9BZW2 595 aa2.33□□□□□ -2.04
CCDC39-203ENST00000473854 CPA4Q9UI42 421 aa2.33□□□□□ -2.04
CCDC39-203ENST00000473854 UTS2RQ9UKP6 389 aa2.33□□□□□ -2.04
CCDC39-203ENST00000473854 RIMKLBQ9ULI2 386 aa2.33□□□□□ -2.04
CCDC39-203ENST00000473854 EIF4G1Q04637 1599 aaKnown RBP2.32□□□□□ -2.04
CCDC39-203ENST00000473854 PAK4O96013 591 aaPredicted RBP2.32□□□□□ -2.04
CCDC39-203ENST00000473854 PARP1P09874 1014 aaKnown RBP2.32□□□□□ -2.04
CCDC39-203ENST00000473854 TMEM225BP0DP42 221 aa2.32□□□□□ -2.04
CCDC39-203ENST00000473854 ARSBP15848 533 aa2.32□□□□□ -2.04
CCDC39-203ENST00000473854 CIITAP33076 1130 aa2.32□□□□□ -2.04
CCDC39-203ENST00000473854 HOXD12P35452 270 aa2.32□□□□□ -2.04
CCDC39-203ENST00000473854 SOX2P48431 317 aa2.32□□□□□ -2.04
CCDC39-203ENST00000473854 DNASE1L3Q13609 305 aa2.32□□□□□ -2.04
CCDC39-203ENST00000473854 GPR18Q14330 331 aa2.32□□□□□ -2.04
CCDC39-203ENST00000473854 SLC39A14Q15043 492 aa2.32□□□□□ -2.04
CCDC39-203ENST00000473854 ZNF772Q68DY9 489 aaPredicted RBP2.32□□□□□ -2.04
CCDC39-203ENST00000473854 MZT2AQ6P582 158 aa2.32□□□□□ -2.04
CCDC39-203ENST00000473854 DGLUCYQ7Z3D6 616 aa2.32□□□□□ -2.04
CCDC39-203ENST00000473854 P3H2Q8IVL5 708 aa2.32□□□□□ -2.04
CCDC39-203ENST00000473854 ZFPM2Q8WW38 1151 aa2.32□□□□□ -2.04
CCDC39-203ENST00000473854 CELF1Q92879 486 aaKnown RBP2.32□□□□□ -2.04
CCDC39-203ENST00000473854 SPSB4Q96A44 273 aa2.32□□□□□ -2.04
CCDC39-203ENST00000473854 URB1-AS1Q96HZ7 61 aa2.32□□□□□ -2.04
CCDC39-203ENST00000473854 ZBTB45Q96K62 511 aaPredicted RBP2.32□□□□□ -2.04
CCDC39-203ENST00000473854 MRGPRX1Q96LB2 322 aa2.32□□□□□ -2.04
CCDC39-203ENST00000473854 UHRF2Q96PU4 802 aa2.32□□□□□ -2.04
CCDC39-203ENST00000473854 TRIM54Q9BYV2 358 aa2.32□□□□□ -2.04
CCDC39-203ENST00000473854 TRIM2Q9C040 744 aa2.32□□□□□ -2.04
CCDC39-203ENST00000473854 ZNF518BQ9C0D4 1074 aa2.32□□□□□ -2.04
CCDC39-203ENST00000473854 FAM83DQ9H4H8 585 aa2.32□□□□□ -2.04
CCDC39-203ENST00000473854 AAMDCQ9H7C9 122 aa2.32□□□□□ -2.04
CCDC39-203ENST00000473854 A1CFQ9NQ94 594 aaKnown RBP2.32□□□□□ -2.04
CCDC39-203ENST00000473854 ASNSD1Q9NWL6 643 aa2.32□□□□□ -2.04
CCDC39-203ENST00000473854 STXBP5LQ9Y2K9 1186 aa2.32□□□□□ -2.04
CCDC39-203ENST00000473854 WIZO95785 1651 aa2.31□□□□□ -2.04
CCDC39-203ENST00000473854 A0A1B0GU03 582 aa2.31□□□□□ -2.04
CCDC39-203ENST00000473854 A0A1B0GVT2 93 aa2.31□□□□□ -2.04
CCDC39-203ENST00000473854 AQP7P3A6NL99 342 aa2.31□□□□□ -2.04
CCDC39-203ENST00000473854 C16orf96A6NNT2 1141 aa2.31□□□□□ -2.04
CCDC39-203ENST00000473854 RHODO00212 210 aa2.31□□□□□ -2.04
CCDC39-203ENST00000473854 BTN3A1O00481 513 aa2.31□□□□□ -2.04
CCDC39-203ENST00000473854 GABRDO14764 452 aa2.31□□□□□ -2.04
CCDC39-203ENST00000473854 PIAS2O75928 621 aa2.31□□□□□ -2.04
CCDC39-203ENST00000473854 WNT1P04628 370 aa2.31□□□□□ -2.04
CCDC39-203ENST00000473854 ENO1P06733 434 aaKnown RBP2.31□□□□□ -2.04
CCDC39-203ENST00000473854 HGFP14210 728 aa2.31□□□□□ -2.04
CCDC39-203ENST00000473854 MATN1P21941 496 aa2.31□□□□□ -2.04
CCDC39-203ENST00000473854 CCND1P24385 295 aa2.31□□□□□ -2.04
CCDC39-203ENST00000473854 DGKQP52824 942 aa2.31□□□□□ -2.04
CCDC39-203ENST00000473854 ARFIP2P53365 341 aa2.31□□□□□ -2.04
CCDC39-203ENST00000473854 SLC13A2Q13183 592 aa2.31□□□□□ -2.04
CCDC39-203ENST00000473854 CTBP1Q13363 440 aa2.31□□□□□ -2.04
CCDC39-203ENST00000473854 FGL2Q14314 439 aa2.31□□□□□ -2.04
CCDC39-203ENST00000473854 PCBP2Q15366 365 aaKnown RBP eCLIP2.31□□□□□ -2.04
CCDC39-203ENST00000473854 TDRD12Q587J7 1177 aaKnown RBP2.31□□□□□ -2.04
CCDC39-203ENST00000473854 FNBP1LQ5T0N5 605 aa2.31□□□□□ -2.04
CCDC39-203ENST00000473854 NOP9Q86U38 636 aaKnown RBP2.31□□□□□ -2.04
CCDC39-203ENST00000473854 EXOC3L1Q86VI1 746 aa2.31□□□□□ -2.04
CCDC39-203ENST00000473854 CADM3Q8N126 398 aa2.31□□□□□ -2.04
CCDC39-203ENST00000473854 LYG1Q8N1E2 194 aa2.31□□□□□ -2.04
CCDC39-203ENST00000473854 ARL14EPQ8N8R7 260 aaPredicted RBP2.31□□□□□ -2.04
CCDC39-203ENST00000473854 GABPB2Q8TAK5 448 aaPredicted RBP2.31□□□□□ -2.04
CCDC39-203ENST00000473854 GJA10Q969M2 543 aa2.31□□□□□ -2.04
CCDC39-203ENST00000473854 P2RX7Q99572 595 aaKnown RBP2.31□□□□□ -2.04
CCDC39-203ENST00000473854 DPH1Q9BZG8 443 aa2.31□□□□□ -2.04
CCDC39-203ENST00000473854 DHX36Q9H2U1 1008 aaKnown RBP2.31□□□□□ -2.04
CCDC39-203ENST00000473854 CATSPERBQ9H7T0 1116 aa2.31□□□□□ -2.04
CCDC39-203ENST00000473854 SDF2L1Q9HCN8 221 aa2.31□□□□□ -2.04
CCDC39-203ENST00000473854 VPS45Q9NRW7 570 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms