RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 MAELQ96JY0 434 aaKnown RBP7.01□□□□□ -1.29
SEC22A-204ENST00000473494 ZNF747Q9BV97 191 aa7.01□□□□□ -1.29
SEC22A-204ENST00000473494 UNC45AQ9H3U1 944 aa7.01□□□□□ -1.29
SEC22A-204ENST00000473494 IFT80Q9P2H3 777 aaPredicted RBP7.01□□□□□ -1.29
SEC22A-204ENST00000473494 SAC3D1A6NKF1 404 aa7□□□□□ -1.29
SEC22A-204ENST00000473494 C3orf70A6NLC5 250 aaPredicted RBP7□□□□□ -1.29
SEC22A-204ENST00000473494 ADH4P08319 380 aa7□□□□□ -1.29
SEC22A-204ENST00000473494 DUSP1P28562 367 aa7□□□□□ -1.29
SEC22A-204ENST00000473494 CCT8P50990 548 aa7□□□□□ -1.29
SEC22A-204ENST00000473494 RBM5P52756 815 aaKnown RBP eCLIP7□□□□□ -1.29
SEC22A-204ENST00000473494 FOXL2P58012 376 aa7□□□□□ -1.29
SEC22A-204ENST00000473494 RNASELQ05823 741 aaKnown RBP7□□□□□ -1.29
SEC22A-204ENST00000473494 MAPRE1Q15691 268 aaKnown RBP7□□□□□ -1.29
SEC22A-204ENST00000473494 PTGR2Q8N8N7 351 aaPredicted RBP7□□□□□ -1.29
SEC22A-204ENST00000473494 CAVIN3Q969G5 261 aa7□□□□□ -1.29
SEC22A-204ENST00000473494 BBC3Q96PG8 261 aaPredicted RBP7□□□□□ -1.29
SEC22A-204ENST00000473494 MMS19Q96T76 1030 aa7□□□□□ -1.29
SEC22A-204ENST00000473494 SEC62Q99442 399 aaKnown RBP7□□□□□ -1.29
SEC22A-204ENST00000473494 NPAS1Q99742 590 aa7□□□□□ -1.29
SEC22A-204ENST00000473494 ABHD10Q9NUJ1 306 aa7□□□□□ -1.29
SEC22A-204ENST00000473494 GAR1Q9NY12 217 aaKnown RBP7□□□□□ -1.29
SEC22A-204ENST00000473494 BAG5Q9UL15 447 aa7□□□□□ -1.29
SEC22A-204ENST00000473494 RAB21Q9UL25 225 aa7□□□□□ -1.29
SEC22A-204ENST00000473494 RCE1Q9Y256 329 aa7□□□□□ -1.29
SEC22A-204ENST00000473494 STX16-NPEPL1H3BU86 382 aa6.99□□□□□ -1.29
SEC22A-204ENST00000473494 QSOX1O00391 747 aa6.99□□□□□ -1.29
SEC22A-204ENST00000473494 STX16O14662 325 aa6.99□□□□□ -1.29
SEC22A-204ENST00000473494 HNRNPRO43390 633 aaKnown RBP6.99□□□□□ -1.29
SEC22A-204ENST00000473494 EPB41L2O43491 1005 aaKnown RBP6.99□□□□□ -1.29
SEC22A-204ENST00000473494 TSPAN3O60637 253 aa6.99□□□□□ -1.29
SEC22A-204ENST00000473494 APEHP13798 732 aaKnown RBP6.99□□□□□ -1.29
SEC22A-204ENST00000473494 IGFBP2P18065 325 aa6.99□□□□□ -1.29
SEC22A-204ENST00000473494 GALNSP34059 522 aa6.99□□□□□ -1.29
SEC22A-204ENST00000473494 GRK5P34947 590 aa6.99□□□□□ -1.29
SEC22A-204ENST00000473494 ZNF169Q14929 603 aaPredicted RBP6.99□□□□□ -1.29
SEC22A-204ENST00000473494 SLC4A8Q2Y0W8 1093 aa6.99□□□□□ -1.29
SEC22A-204ENST00000473494 ZNF484Q5JVG2 852 aa6.99□□□□□ -1.29
SEC22A-204ENST00000473494 L1TD1Q5T7N2 865 aaKnown RBP6.99□□□□□ -1.29
SEC22A-204ENST00000473494 RETSATQ6NUM9 610 aa6.99□□□□□ -1.29
SEC22A-204ENST00000473494 Q6ZPA2 131 aa6.99□□□□□ -1.29
SEC22A-204ENST00000473494 C12orf76Q8N812 135 aaPredicted RBP6.99□□□□□ -1.29
SEC22A-204ENST00000473494 PIGSQ96S52 555 aa6.99□□□□□ -1.29
SEC22A-204ENST00000473494 REEP2Q9BRK0 252 aa6.99□□□□□ -1.29
SEC22A-204ENST00000473494 FZD4Q9ULV1 537 aa6.99□□□□□ -1.29
SEC22A-204ENST00000473494 KAT6BQ8WYB5 2073 aa6.99□□□□□ -1.29
SEC22A-204ENST00000473494 CCDC196A0A1B0GTZ2 297 aa6.98□□□□□ -1.29
SEC22A-204ENST00000473494 VWA3AA6NCI4 1184 aa6.98□□□□□ -1.29
SEC22A-204ENST00000473494 ZNF213O14771 459 aa6.98□□□□□ -1.29
SEC22A-204ENST00000473494 SEPT4O43236 478 aa6.98□□□□□ -1.29
SEC22A-204ENST00000473494 CSF1P09603 554 aa6.98□□□□□ -1.29
SEC22A-204ENST00000473494 XBP1P17861 261 aa6.98□□□□□ -1.29
SEC22A-204ENST00000473494 JAK3P52333 1124 aa6.98□□□□□ -1.29
SEC22A-204ENST00000473494 RCAN1P53805 252 aa6.98□□□□□ -1.29
SEC22A-204ENST00000473494 KRTAP10-2P60368 255 aa6.98□□□□□ -1.29
SEC22A-204ENST00000473494 MPP1Q00013 466 aa6.98□□□□□ -1.29
SEC22A-204ENST00000473494 CFHR3Q02985 330 aa6.98□□□□□ -1.29
SEC22A-204ENST00000473494 DDX10Q13206 875 aaKnown RBP6.98□□□□□ -1.29
SEC22A-204ENST00000473494 SIM2Q14190 667 aaPredicted RBP6.98□□□□□ -1.29
SEC22A-204ENST00000473494 HECTD2Q5U5R9 776 aa6.98□□□□□ -1.29
SEC22A-204ENST00000473494 WDR93Q6P2C0 686 aa6.98□□□□□ -1.29
SEC22A-204ENST00000473494 CRIP3Q6Q6R5 217 aa6.98□□□□□ -1.29
SEC22A-204ENST00000473494 VRK3Q8IV63 474 aa6.98□□□□□ -1.29
SEC22A-204ENST00000473494 FAM71DQ8N9W8 422 aa6.98□□□□□ -1.29
SEC22A-204ENST00000473494 FSIP1Q8NA03 581 aa6.98□□□□□ -1.29
SEC22A-204ENST00000473494 ZNF341Q9BYN7 854 aa6.98□□□□□ -1.29
SEC22A-204ENST00000473494 ARHGAP39Q9C0H5 1083 aa6.98□□□□□ -1.29
SEC22A-204ENST00000473494 PLEKHA2Q9HB19 425 aa6.98□□□□□ -1.29
SEC22A-204ENST00000473494 SEMA5BQ9P283 1151 aa6.98□□□□□ -1.29
SEC22A-204ENST00000473494 SALL3Q9BXA9 1300 aa6.98□□□□□ -1.29
SEC22A-204ENST00000473494 TBC1D3DA0A087WVF3 549 aa6.97□□□□□ -1.29
SEC22A-204ENST00000473494 TBC1D3IA0A087WXS9 549 aa6.97□□□□□ -1.29
SEC22A-204ENST00000473494 TBC1D3EA0A087X179 549 aa6.97□□□□□ -1.29
SEC22A-204ENST00000473494 TBC1D3KA0A087X1G2 549 aa6.97□□□□□ -1.29
SEC22A-204ENST00000473494 TBC1D3BA6NDS4 549 aa6.97□□□□□ -1.29
SEC22A-204ENST00000473494 TBC1D3FA6NER0 549 aaPredicted RBP6.97□□□□□ -1.29
SEC22A-204ENST00000473494 AGAP5A6NIR3 686 aa6.97□□□□□ -1.29
SEC22A-204ENST00000473494 TBC1D3LB9A6J9 549 aa6.97□□□□□ -1.29
SEC22A-204ENST00000473494 NPIPB8E9PQR5 432 aa6.97□□□□□ -1.29
SEC22A-204ENST00000473494 RHOBTB3O94955 611 aa6.97□□□□□ -1.29
SEC22A-204ENST00000473494 ALDOAP04075 364 aaKnown RBP6.97□□□□□ -1.29
SEC22A-204ENST00000473494 TBC1D3HP0C7X1 549 aa6.97□□□□□ -1.29
SEC22A-204ENST00000473494 MCM7P33993 719 aa6.97□□□□□ -1.29
SEC22A-204ENST00000473494 DLGAP5Q15398 846 aa6.97□□□□□ -1.29
SEC22A-204ENST00000473494 TMEM63BQ5T3F8 832 aa6.97□□□□□ -1.29
SEC22A-204ENST00000473494 ATG16L1Q676U5 607 aa6.97□□□□□ -1.29
SEC22A-204ENST00000473494 TBC1D3GQ6DHY5 549 aa6.97□□□□□ -1.29
SEC22A-204ENST00000473494 TBC1D3CQ6IPX1 549 aa6.97□□□□□ -1.29
SEC22A-204ENST00000473494 HEATR4Q86WZ0 1026 aa6.97□□□□□ -1.29
SEC22A-204ENST00000473494 ULK2Q8IYT8 1036 aa6.97□□□□□ -1.29
SEC22A-204ENST00000473494 TBC1D3Q8IZP1 549 aaPredicted RBP6.97□□□□□ -1.29
SEC22A-204ENST00000473494 PPHLN1Q8NEY8 458 aaKnown RBP6.97□□□□□ -1.29
SEC22A-204ENST00000473494 GPR63Q9BZJ6 419 aa6.97□□□□□ -1.29
SEC22A-204ENST00000473494 CIPCQ9C0C6 399 aa6.97□□□□□ -1.29
SEC22A-204ENST00000473494 TOR3AQ9H497 397 aa6.97□□□□□ -1.29
SEC22A-204ENST00000473494 USP29Q9HBJ7 922 aa6.97□□□□□ -1.29
SEC22A-204ENST00000473494 ENTPD2Q9Y5L3 495 aa6.97□□□□□ -1.29
SEC22A-204ENST00000473494 CYP3A7-CYP3A51PA0A087WV96 503 aa6.96□□□□□ -1.3
SEC22A-204ENST00000473494 A6NLC8 198 aa6.96□□□□□ -1.3
SEC22A-204ENST00000473494 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.96□□□□□ -1.3
SEC22A-204ENST00000473494 MATN3O15232 486 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms