RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 FOXD4L3Q6VB84 417 aaPredicted RBP13.22□□□□□ -0.29
TRAF4-209ENST00000473421 ANKS1BQ7Z6G8 1248 aa13.22□□□□□ -0.29
TRAF4-209ENST00000473421 ADIPOR2Q86V24 386 aa13.22□□□□□ -0.29
TRAF4-209ENST00000473421 GATAD2AQ86YP4 633 aa13.22□□□□□ -0.29
TRAF4-209ENST00000473421 IQUBQ8NA54 791 aa13.22□□□□□ -0.29
TRAF4-209ENST00000473421 OR2T3Q8NH03 318 aa13.22□□□□□ -0.29
TRAF4-209ENST00000473421 PIP4K2CQ8TBX8 421 aa13.22□□□□□ -0.29
TRAF4-209ENST00000473421 WFDC5Q8TCV5 224 aa13.22□□□□□ -0.29
TRAF4-209ENST00000473421 TAS1R2Q8TE23 839 aa13.22□□□□□ -0.29
TRAF4-209ENST00000473421 FOXD4L4Q8WXT5 416 aaPredicted RBP13.22□□□□□ -0.29
TRAF4-209ENST00000473421 CDC6Q99741 560 aa13.22□□□□□ -0.29
TRAF4-209ENST00000473421 LRRC27Q9C0I9 530 aa13.22□□□□□ -0.29
TRAF4-209ENST00000473421 CUEDC2Q9H467 287 aa13.22□□□□□ -0.29
TRAF4-209ENST00000473421 PRSS16Q9NQE7 514 aa13.22□□□□□ -0.29
TRAF4-209ENST00000473421 PCDHA5Q9Y5H7 936 aa13.22□□□□□ -0.29
TRAF4-209ENST00000473421 TP53BP1Q12888 1972 aaPredicted RBP13.21□□□□□ -0.29
TRAF4-209ENST00000473421 ASH1LQ9NR48 2969 aaKnown RBP13.21□□□□□ -0.29
TRAF4-209ENST00000473421 SLC12A8A0AV02 714 aa13.21□□□□□ -0.29
TRAF4-209ENST00000473421 TNFSF14O43557 240 aa13.21□□□□□ -0.29
TRAF4-209ENST00000473421 TLX3O43711 291 aaPredicted RBP13.21□□□□□ -0.29
TRAF4-209ENST00000473421 FSBPO95073 299 aa13.21□□□□□ -0.29
TRAF4-209ENST00000473421 WNT1P04628 370 aa13.21□□□□□ -0.29
TRAF4-209ENST00000473421 TRIM49P0CI25 452 aa13.21□□□□□ -0.29
TRAF4-209ENST00000473421 TRIM49CP0CI26 452 aa13.21□□□□□ -0.29
TRAF4-209ENST00000473421 ACADMP11310 421 aa13.21□□□□□ -0.29
TRAF4-209ENST00000473421 RPS14P62263 151 aaKnown RBP13.21□□□□□ -0.29
TRAF4-209ENST00000473421 AMPD3Q01432 767 aa13.21□□□□□ -0.29
TRAF4-209ENST00000473421 SHBQ15464 509 aa13.21□□□□□ -0.29
TRAF4-209ENST00000473421 IL27RAQ6UWB1 636 aa13.21□□□□□ -0.29
TRAF4-209ENST00000473421 FAM217AQ8IXS0 508 aa13.21□□□□□ -0.29
TRAF4-209ENST00000473421 ZNF276Q8N554 614 aa13.21□□□□□ -0.29
TRAF4-209ENST00000473421 DDI1Q8WTU0 396 aa13.21□□□□□ -0.29
TRAF4-209ENST00000473421 ARID3AQ99856 593 aa13.21□□□□□ -0.29
TRAF4-209ENST00000473421 DUSP16Q9BY84 665 aa13.21□□□□□ -0.29
TRAF4-209ENST00000473421 CLIC5Q9NZA1 410 aa13.21□□□□□ -0.29
TRAF4-209ENST00000473421 MARCH2Q9P0N8 246 aa13.21□□□□□ -0.29
TRAF4-209ENST00000473421 SERGEFQ9UGK8 458 aa13.21□□□□□ -0.29
TRAF4-209ENST00000473421 MGAQ8IWI9 3026 aa13.21□□□□□ -0.29
TRAF4-209ENST00000473421 PVALEFA0A1B0GWK0 134 aa13.2□□□□□ -0.3
TRAF4-209ENST00000473421 STX6O43752 255 aa13.2□□□□□ -0.3
TRAF4-209ENST00000473421 CUTAO60888 179 aa13.2□□□□□ -0.3
TRAF4-209ENST00000473421 PPP6R2O75170 966 aa13.2□□□□□ -0.3
TRAF4-209ENST00000473421 NR3C1P04150 777 aa13.2□□□□□ -0.3
TRAF4-209ENST00000473421 RPN1P04843 607 aaKnown RBP13.2□□□□□ -0.3
TRAF4-209ENST00000473421 IGHV4-34P06331 123 aa13.2□□□□□ -0.3
TRAF4-209ENST00000473421 C7P10643 843 aa13.2□□□□□ -0.3
TRAF4-209ENST00000473421 CHKAP35790 457 aa13.2□□□□□ -0.3
TRAF4-209ENST00000473421 PIK3CAP42336 1068 aa13.2□□□□□ -0.3
TRAF4-209ENST00000473421 CTSKP43235 329 aa13.2□□□□□ -0.3
TRAF4-209ENST00000473421 GCLMP48507 274 aa13.2□□□□□ -0.3
TRAF4-209ENST00000473421 ZNF132P52740 706 aa13.2□□□□□ -0.3
TRAF4-209ENST00000473421 AP3M2P53677 418 aa13.2□□□□□ -0.3
TRAF4-209ENST00000473421 COG7P83436 770 aa13.2□□□□□ -0.3
TRAF4-209ENST00000473421 DNAJC3Q13217 504 aa13.2□□□□□ -0.3
TRAF4-209ENST00000473421 SLC9A9Q8IVB4 645 aa13.2□□□□□ -0.3
TRAF4-209ENST00000473421 SCUBE3Q8IX30 993 aa13.2□□□□□ -0.3
TRAF4-209ENST00000473421 CPXM2Q8N436 756 aa13.2□□□□□ -0.3
TRAF4-209ENST00000473421 TMC2Q8TDI7 906 aa13.2□□□□□ -0.3
TRAF4-209ENST00000473421 UCMAQ8WVF2 138 aa13.2□□□□□ -0.3
TRAF4-209ENST00000473421 SEMA4DQ92854 862 aa13.2□□□□□ -0.3
TRAF4-209ENST00000473421 COL26A1Q96A83 441 aa13.2□□□□□ -0.3
TRAF4-209ENST00000473421 NT5C1AQ9BXI3 368 aa13.2□□□□□ -0.3
TRAF4-209ENST00000473421 LHX5Q9H2C1 402 aa13.2□□□□□ -0.3
TRAF4-209ENST00000473421 CAAP1Q9H8G2 361 aa13.2□□□□□ -0.3
TRAF4-209ENST00000473421 PNPLA8Q9NP80 782 aa13.2□□□□□ -0.3
TRAF4-209ENST00000473421 CGNQ9P2M7 1197 aaKnown RBP13.2□□□□□ -0.3
TRAF4-209ENST00000473421 SFMBT1Q9UHJ3 866 aa13.2□□□□□ -0.3
TRAF4-209ENST00000473421 SERTAD1Q9UHV2 236 aa13.2□□□□□ -0.3
TRAF4-209ENST00000473421 PTPRQQ9UMZ3 2332 aa13.19□□□□□ -0.3
TRAF4-209ENST00000473421 MYLKQ15746 1914 aa13.19□□□□□ -0.3
TRAF4-209ENST00000473421 GOLGA6L7A0A1B0GV03 622 aa13.19□□□□□ -0.3
TRAF4-209ENST00000473421 NPC1O15118 1278 aa13.19□□□□□ -0.3
TRAF4-209ENST00000473421 PCDHGA12O60330 932 aa13.19□□□□□ -0.3
TRAF4-209ENST00000473421 SEMA4FO95754 770 aa13.19□□□□□ -0.3
TRAF4-209ENST00000473421 RALAP11233 206 aa13.19□□□□□ -0.3
TRAF4-209ENST00000473421 P4HA1P13674 534 aa13.19□□□□□ -0.3
TRAF4-209ENST00000473421 EIF2S3P41091 472 aaKnown RBP13.19□□□□□ -0.3
TRAF4-209ENST00000473421 GRIA4P48058 902 aa13.19□□□□□ -0.3
TRAF4-209ENST00000473421 YWHAGP61981 247 aaKnown RBP eCLIP13.19□□□□□ -0.3
TRAF4-209ENST00000473421 KCNJ12Q14500 433 aa13.19□□□□□ -0.3
TRAF4-209ENST00000473421 TRIP4Q15650 581 aaPredicted RBP13.19□□□□□ -0.3
TRAF4-209ENST00000473421 KMT5BQ4FZB7 885 aa13.19□□□□□ -0.3
TRAF4-209ENST00000473421 FNDC3BQ53EP0 1204 aaKnown RBP13.19□□□□□ -0.3
TRAF4-209ENST00000473421 CEP135Q66GS9 1140 aa13.19□□□□□ -0.3
TRAF4-209ENST00000473421 CHST9Q7L1S5 443 aa13.19□□□□□ -0.3
TRAF4-209ENST00000473421 KIAA0907Q7Z7F0 614 aaPredicted RBP13.19□□□□□ -0.3
TRAF4-209ENST00000473421 PIGZQ86VD9 579 aa13.19□□□□□ -0.3
TRAF4-209ENST00000473421 GALNT15Q8N3T1 639 aa13.19□□□□□ -0.3
TRAF4-209ENST00000473421 PDCD7Q8N8D1 485 aaKnown RBP13.19□□□□□ -0.3
TRAF4-209ENST00000473421 TAF4BQ92750 862 aa13.19□□□□□ -0.3
TRAF4-209ENST00000473421 IGSF8Q969P0 613 aa13.19□□□□□ -0.3
TRAF4-209ENST00000473421 MYEOVQ96EZ4 313 aa13.19□□□□□ -0.3
TRAF4-209ENST00000473421 MYO19Q96H55 970 aa13.19□□□□□ -0.3
TRAF4-209ENST00000473421 SLC6A18Q96N87 628 aa13.19□□□□□ -0.3
TRAF4-209ENST00000473421 BACH2Q9BYV9 841 aa13.19□□□□□ -0.3
TRAF4-209ENST00000473421 MMRN2Q9H8L6 949 aa13.19□□□□□ -0.3
TRAF4-209ENST00000473421 ABCB8Q9NUT2 735 aa13.19□□□□□ -0.3
TRAF4-209ENST00000473421 PCDHA7Q9UN72 937 aa13.19□□□□□ -0.3
TRAF4-209ENST00000473421 ZNF510Q9Y2H8 683 aa13.19□□□□□ -0.3
TRAF4-209ENST00000473421 CFAP46Q8IYW2 2715 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms