RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 NCAM1P13591 858 aa14.15□□□□□ -0.14
CHD3-209ENST00000473376 IL12RB1P42701 662 aa14.15□□□□□ -0.14
CHD3-209ENST00000473376 MAPK8P45983 427 aa14.15□□□□□ -0.14
CHD3-209ENST00000473376 RING1Q06587 406 aa14.15□□□□□ -0.14
CHD3-209ENST00000473376 CETN1Q12798 172 aa14.15□□□□□ -0.14
CHD3-209ENST00000473376 STIM1Q13586 685 aa14.15□□□□□ -0.14
CHD3-209ENST00000473376 BSPRYQ5W0U4 402 aa14.15□□□□□ -0.14
CHD3-209ENST00000473376 ANKRD40Q6AI12 368 aa14.15□□□□□ -0.14
CHD3-209ENST00000473376 MSANTD2Q6P1R3 559 aa14.15□□□□□ -0.14
CHD3-209ENST00000473376 IL27RAQ6UWB1 636 aa14.15□□□□□ -0.14
CHD3-209ENST00000473376 LCLAT1Q6UWP7 414 aa14.15□□□□□ -0.14
CHD3-209ENST00000473376 TMPRSS6Q8IU80 811 aa14.15□□□□□ -0.14
CHD3-209ENST00000473376 UNC45BQ8IWX7 931 aa14.15□□□□□ -0.14
CHD3-209ENST00000473376 UBR7Q8N806 425 aa14.15□□□□□ -0.14
CHD3-209ENST00000473376 DEFB124Q8NES8 71 aa14.15□□□□□ -0.14
CHD3-209ENST00000473376 ENGASEQ8NFI3 743 aa14.15□□□□□ -0.14
CHD3-209ENST00000473376 DDI1Q8WTU0 396 aa14.15□□□□□ -0.14
CHD3-209ENST00000473376 RNF139Q8WU17 664 aa14.15□□□□□ -0.14
CHD3-209ENST00000473376 PRCCQ92733 491 aaPredicted RBP14.15□□□□□ -0.14
CHD3-209ENST00000473376 GATA6Q92908 595 aa14.15□□□□□ -0.14
CHD3-209ENST00000473376 SIPA1Q96FS4 1042 aa14.15□□□□□ -0.14
CHD3-209ENST00000473376 P2RY11Q96G91 374 aa14.15□□□□□ -0.14
CHD3-209ENST00000473376 ARID3AQ99856 593 aa14.15□□□□□ -0.14
CHD3-209ENST00000473376 ULBP1Q9BZM6 244 aa14.15□□□□□ -0.14
CHD3-209ENST00000473376 MKRN2Q9H000 416 aaKnown RBP14.15□□□□□ -0.14
CHD3-209ENST00000473376 OSGEPQ9NPF4 335 aa14.15□□□□□ -0.14
CHD3-209ENST00000473376 MSRB2Q9Y3D2 182 aa14.15□□□□□ -0.14
CHD3-209ENST00000473376 PCNX2A6NKB5 2137 aa14.15□□□□□ -0.14
CHD3-209ENST00000473376 GON4LQ3T8J9 2241 aa14.14□□□□□ -0.15
CHD3-209ENST00000473376 ASCC3Q8N3C0 2202 aaKnown RBP14.14□□□□□ -0.15
CHD3-209ENST00000473376 PI4KAP42356 2102 aa14.14□□□□□ -0.15
CHD3-209ENST00000473376 GOLGA6L4A6NEF3 574 aa14.14□□□□□ -0.15
CHD3-209ENST00000473376 WASH3PC4AMC7 463 aa14.14□□□□□ -0.15
CHD3-209ENST00000473376 O00370 1275 aa14.14□□□□□ -0.15
CHD3-209ENST00000473376 CD59P13987 128 aa14.14□□□□□ -0.15
CHD3-209ENST00000473376 TPMTP51580 245 aa14.14□□□□□ -0.15
CHD3-209ENST00000473376 FOXC1Q12948 553 aa14.14□□□□□ -0.15
CHD3-209ENST00000473376 NNTQ13423 1086 aa14.14□□□□□ -0.15
CHD3-209ENST00000473376 CAMK2GQ13555 558 aaPredicted RBP14.14□□□□□ -0.15
CHD3-209ENST00000473376 ZNF234Q14588 700 aa14.14□□□□□ -0.15
CHD3-209ENST00000473376 CNGA2Q16280 664 aa14.14□□□□□ -0.15
CHD3-209ENST00000473376 MEA1Q16626 185 aa14.14□□□□□ -0.15
CHD3-209ENST00000473376 PLEKHG6Q3KR16 790 aa14.14□□□□□ -0.15
CHD3-209ENST00000473376 TCERG1LQ5VWI1 586 aa14.14□□□□□ -0.15
CHD3-209ENST00000473376 NUGGCQ68CJ6 796 aa14.14□□□□□ -0.15
CHD3-209ENST00000473376 BEND5Q7L4P6 421 aa14.14□□□□□ -0.15
CHD3-209ENST00000473376 GLRX5Q86SX6 157 aa14.14□□□□□ -0.15
CHD3-209ENST00000473376 SIX6OS1Q8N1H7 587 aa14.14□□□□□ -0.15
CHD3-209ENST00000473376 SLC35F5Q8WV83 523 aa14.14□□□□□ -0.15
CHD3-209ENST00000473376 TOE1Q96GM8 510 aaKnown RBP14.14□□□□□ -0.15
CHD3-209ENST00000473376 HSFY1Q96LI6 401 aa14.14□□□□□ -0.15
CHD3-209ENST00000473376 SCNM1Q9BWG6 230 aa14.14□□□□□ -0.15
CHD3-209ENST00000473376 TMEM245Q9H330 911 aa14.14□□□□□ -0.15
CHD3-209ENST00000473376 PLA2G4CQ9UP65 541 aa14.14□□□□□ -0.15
CHD3-209ENST00000473376 PCDHGB2Q9Y5G2 931 aa14.14□□□□□ -0.15
CHD3-209ENST00000473376 RAD54BQ9Y620 910 aa14.14□□□□□ -0.15
CHD3-209ENST00000473376 PCDH15Q96QU1 1955 aa14.13□□□□□ -0.15
CHD3-209ENST00000473376 PSMA7O14818 248 aa14.13□□□□□ -0.15
CHD3-209ENST00000473376 FBXO21O94952 628 aa14.13□□□□□ -0.15
CHD3-209ENST00000473376 IGLV3-27P01718 113 aa14.13□□□□□ -0.15
CHD3-209ENST00000473376 HOXD9P28356 352 aaPredicted RBP14.13□□□□□ -0.15
CHD3-209ENST00000473376 COPAP53621 1224 aa14.13□□□□□ -0.15
CHD3-209ENST00000473376 SIM1P81133 766 aaPredicted RBP14.13□□□□□ -0.15
CHD3-209ENST00000473376 ADIGQ0VDE8 80 aa14.13□□□□□ -0.15
CHD3-209ENST00000473376 PNOCQ13519 176 aa14.13□□□□□ -0.15
CHD3-209ENST00000473376 GOLGA7BQ2TAP0 167 aa14.13□□□□□ -0.15
CHD3-209ENST00000473376 DCAF17Q5H9S7 520 aaPredicted RBP14.13□□□□□ -0.15
CHD3-209ENST00000473376 KIAA1324Q6UXG2 1013 aaKnown RBP14.13□□□□□ -0.15
CHD3-209ENST00000473376 SERPINA13PQ6UXR4 307 aa14.13□□□□□ -0.15
CHD3-209ENST00000473376 DBX2Q6ZNG2 339 aa14.13□□□□□ -0.15
CHD3-209ENST00000473376 FMNL3Q8IVF7 1028 aa14.13□□□□□ -0.15
CHD3-209ENST00000473376 SMYD4Q8IYR2 804 aaPredicted RBP14.13□□□□□ -0.15
CHD3-209ENST00000473376 RGL4Q8IZJ4 473 aa14.13□□□□□ -0.15
CHD3-209ENST00000473376 AHI1Q8N157 1196 aa14.13□□□□□ -0.15
CHD3-209ENST00000473376 KDM1BQ8NB78 822 aa14.13□□□□□ -0.15
CHD3-209ENST00000473376 OR2T3Q8NH03 318 aa14.13□□□□□ -0.15
CHD3-209ENST00000473376 GOLGA1Q92805 767 aa14.13□□□□□ -0.15
CHD3-209ENST00000473376 BHMTQ93088 406 aa14.13□□□□□ -0.15
CHD3-209ENST00000473376 SMARCE1Q969G3 411 aa14.13□□□□□ -0.15
CHD3-209ENST00000473376 TMA16Q96EY4 203 aaKnown RBP14.13□□□□□ -0.15
CHD3-209ENST00000473376 TRIM62Q9BVG3 475 aa14.13□□□□□ -0.15
CHD3-209ENST00000473376 GTPBP2Q9BX10 602 aaKnown RBP14.13□□□□□ -0.15
CHD3-209ENST00000473376 ATXN2Q99700 1313 aaKnown RBP14.13□□□□□ -0.15
CHD3-209ENST00000473376 CACNA1EQ15878 2313 aa14.12□□□□□ -0.15
CHD3-209ENST00000473376 YJEFN3A6XGL0 299 aa14.12□□□□□ -0.15
CHD3-209ENST00000473376 E7ENQ6 273 aa14.12□□□□□ -0.15
CHD3-209ENST00000473376 SART1O43290 800 aaKnown RBP14.12□□□□□ -0.15
CHD3-209ENST00000473376 ATP5BP06576 529 aaKnown RBP14.12□□□□□ -0.15
CHD3-209ENST00000473376 ACADMP11310 421 aa14.12□□□□□ -0.15
CHD3-209ENST00000473376 HLA-FP30511 346 aa14.12□□□□□ -0.15
CHD3-209ENST00000473376 RPL34P49207 117 aaKnown RBP14.12□□□□□ -0.15
CHD3-209ENST00000473376 SLC11A2P49281 568 aa14.12□□□□□ -0.15
CHD3-209ENST00000473376 FMO5P49326 533 aa14.12□□□□□ -0.15
CHD3-209ENST00000473376 DAOAP59103 153 aa14.12□□□□□ -0.15
CHD3-209ENST00000473376 NUCB2P80303 420 aa14.12□□□□□ -0.15
CHD3-209ENST00000473376 GCNT1Q02742 428 aa14.12□□□□□ -0.15
CHD3-209ENST00000473376 ARID5AQ03989 594 aa14.12□□□□□ -0.15
CHD3-209ENST00000473376 ARID5BQ14865 1188 aa14.12□□□□□ -0.15
CHD3-209ENST00000473376 TMEM215Q68D42 235 aa14.12□□□□□ -0.15
CHD3-209ENST00000473376 EEF2KMTQ96G04 330 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms