RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 PDE1CQ14123 709 aaPredicted RBP14.68□□□□□ -0.06
NHLRC3-204ENST00000473371 CCDC14Q49A88 953 aa14.68□□□□□ -0.06
NHLRC3-204ENST00000473371 EEF1DP3Q658K8 133 aa14.68□□□□□ -0.06
NHLRC3-204ENST00000473371 C10orf107Q8IVU9 208 aa14.68□□□□□ -0.06
NHLRC3-204ENST00000473371 C1orf127Q8N9H9 656 aa14.68□□□□□ -0.06
NHLRC3-204ENST00000473371 ICA1LQ8NDH6 482 aa14.68□□□□□ -0.06
NHLRC3-204ENST00000473371 ACMSDQ8TDX5 336 aa14.68□□□□□ -0.06
NHLRC3-204ENST00000473371 OPTNQ96CV9 577 aa14.68□□□□□ -0.06
NHLRC3-204ENST00000473371 ZBED3Q96IU2 234 aaPredicted RBP14.68□□□□□ -0.06
NHLRC3-204ENST00000473371 SNRNP25Q9BV90 132 aaKnown RBP14.68□□□□□ -0.06
NHLRC3-204ENST00000473371 UBE2OQ9C0C9 1292 aaKnown RBP14.68□□□□□ -0.06
NHLRC3-204ENST00000473371 XPNPEP3Q9NQH7 507 aa14.68□□□□□ -0.06
NHLRC3-204ENST00000473371 DNAJC28Q9NX36 388 aa14.68□□□□□ -0.06
NHLRC3-204ENST00000473371 MOCS1Q9NZB8 636 aa14.68□□□□□ -0.06
NHLRC3-204ENST00000473371 A6NJR5 290 aa14.67□□□□□ -0.06
NHLRC3-204ENST00000473371 ZMPSTE24O75844 475 aa14.67□□□□□ -0.06
NHLRC3-204ENST00000473371 NFICP08651 508 aa14.67□□□□□ -0.06
NHLRC3-204ENST00000473371 TBL3Q12788 808 aaKnown RBP14.67□□□□□ -0.06
NHLRC3-204ENST00000473371 PCLAFQ15004 111 aa14.67□□□□□ -0.06
NHLRC3-204ENST00000473371 ANKRD20A4Q4UJ75 823 aa14.67□□□□□ -0.06
NHLRC3-204ENST00000473371 TMEM192Q8IY95 271 aa14.67□□□□□ -0.06
NHLRC3-204ENST00000473371 CDKL2Q92772 493 aa14.67□□□□□ -0.06
NHLRC3-204ENST00000473371 MIS12Q9H081 205 aa14.67□□□□□ -0.06
NHLRC3-204ENST00000473371 MYOZ2Q9NPC6 264 aa14.67□□□□□ -0.06
NHLRC3-204ENST00000473371 BTBD7Q9P203 1132 aa14.67□□□□□ -0.06
NHLRC3-204ENST00000473371 DCDC2Q9UHG0 476 aa14.67□□□□□ -0.06
NHLRC3-204ENST00000473371 SF3B1O75533 1304 aaKnown RBP eCLIP14.67□□□□□ -0.06
NHLRC3-204ENST00000473371 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.67□□□□□ -0.06
NHLRC3-204ENST00000473371 INO80B-WBP1J3KQ70 363 aa14.67□□□□□ -0.06
NHLRC3-204ENST00000473371 B4GALT5O43286 388 aa14.67□□□□□ -0.06
NHLRC3-204ENST00000473371 ALDOAP04075 364 aaKnown RBP14.67□□□□□ -0.06
NHLRC3-204ENST00000473371 UBA1P22314 1058 aaKnown RBP14.67□□□□□ -0.06
NHLRC3-204ENST00000473371 CHN2P52757 468 aa14.67□□□□□ -0.06
NHLRC3-204ENST00000473371 HMGCS2P54868 508 aa14.67□□□□□ -0.06
NHLRC3-204ENST00000473371 GRM2Q14416 872 aa14.67□□□□□ -0.06
NHLRC3-204ENST00000473371 SMAD1Q15797 465 aaKnown RBP14.67□□□□□ -0.06
NHLRC3-204ENST00000473371 SATL1Q86VE3 508 aa14.67□□□□□ -0.06
NHLRC3-204ENST00000473371 NCAPG2Q86XI2 1143 aa14.67□□□□□ -0.06
NHLRC3-204ENST00000473371 RTKN2Q8IZC4 609 aa14.67□□□□□ -0.06
NHLRC3-204ENST00000473371 DRAXINQ8NBI3 349 aaPredicted RBP14.67□□□□□ -0.06
NHLRC3-204ENST00000473371 INO80BQ9C086 356 aaPredicted RBP14.67□□□□□ -0.06
NHLRC3-204ENST00000473371 CSDE1O75534 798 aaKnown RBP14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 GCATO75600 419 aa14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 MYL4P12829 197 aa14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 CYP2F1P24903 491 aa14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 GRK2P25098 689 aa14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 BTKQ06187 659 aa14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 PACS1Q6VY07 963 aa14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 SPATA24Q86W54 205 aa14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 FBXW8Q8N3Y1 598 aa14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 PIP4K2CQ8TBX8 421 aa14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 TFB1MQ8WVM0 346 aaKnown RBP14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 SORT1Q99523 831 aa14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 CREB3O43889 395 aa14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 PIM1P11309 404 aaPredicted RBP14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 VAV1P15498 845 aa14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 SDC4P31431 198 aa14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 SH3BGRP55822 239 aaPredicted RBP14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 CRADDP78560 199 aa14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 GBE1Q04446 702 aa14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 FOLH1Q04609 750 aa14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 MXD4Q14582 209 aaPredicted RBP14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 SMYD5Q6GMV2 418 aa14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 TSHZ1Q6ZSZ6 1077 aa14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 C2orf40Q9H1Z8 148 aa14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 RGS17Q9UGC6 210 aaPredicted RBP14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 DTNAQ9Y4J8 743 aa14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 SMIM31A0A1B0GVY4 71 aa14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 DCXO43602 365 aa14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 STK10O94804 968 aaKnown RBP14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 IL18RAPO95256 599 aa14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 RALBP11234 206 aa14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 TCF7P36402 384 aaPredicted RBP14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 ABCE1P61221 599 aaKnown RBP14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 FRMD7Q6ZUT3 714 aa14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 PHTF2Q8N3S3 785 aa14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 JDP2Q8WYK2 163 aa14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 NMD3Q96D46 503 aaKnown RBP14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 CLMNQ96JQ2 1002 aa14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 NLRP4Q96MN2 994 aa14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 GCNAQ96QF7 691 aa14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 ZNF670Q9BS34 389 aa14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 TSPAN16Q9UKR8 245 aa14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 ARHGAP26Q9UNA1 814 aa14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 AFG3L2Q9Y4W6 797 aa14.66□□□□□ -0.06
NHLRC3-204ENST00000473371 FARP2O94887 1054 aaPredicted RBP14.65□□□□□ -0.06
NHLRC3-204ENST00000473371 PGM3O95394 542 aa14.65□□□□□ -0.06
NHLRC3-204ENST00000473371 COX4I1P13073 169 aa14.65□□□□□ -0.06
NHLRC3-204ENST00000473371 PROZP22891 400 aa14.65□□□□□ -0.06
NHLRC3-204ENST00000473371 DEUP1Q05D60 604 aa14.65□□□□□ -0.06
NHLRC3-204ENST00000473371 ITGA9Q13797 1035 aa14.65□□□□□ -0.06
NHLRC3-204ENST00000473371 TNFAIP1Q13829 316 aa14.65□□□□□ -0.06
NHLRC3-204ENST00000473371 MAP7Q14244 749 aa14.65□□□□□ -0.06
NHLRC3-204ENST00000473371 MAP1SQ66K74 1059 aaPredicted RBP14.65□□□□□ -0.06
NHLRC3-204ENST00000473371 ATG14Q6ZNE5 492 aa14.65□□□□□ -0.06
NHLRC3-204ENST00000473371 NIM1KQ8IY84 436 aa14.65□□□□□ -0.06
NHLRC3-204ENST00000473371 ZNF280CQ8ND82 737 aa14.65□□□□□ -0.06
NHLRC3-204ENST00000473371 KCNK16Q96T55 309 aa14.65□□□□□ -0.06
NHLRC3-204ENST00000473371 TBCBQ99426 244 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms