RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 NUP205Q92621 2012 aa13.02□□□□□ -0.33
TRAPPC12-217ENST00000473348 KCNU1A8MYU2 1149 aa13.02□□□□□ -0.33
TRAPPC12-217ENST00000473348 I6L893 689 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC12-217ENST00000473348 LEFTY2O00292 366 aa13.02□□□□□ -0.33
TRAPPC12-217ENST00000473348 PSTPIP1O43586 416 aa13.02□□□□□ -0.33
TRAPPC12-217ENST00000473348 KRT7P08729 469 aa13.02□□□□□ -0.33
TRAPPC12-217ENST00000473348 CORO1AP31146 461 aaKnown RBP13.02□□□□□ -0.33
TRAPPC12-217ENST00000473348 CTNNA1P35221 906 aaKnown RBP13.02□□□□□ -0.33
TRAPPC12-217ENST00000473348 ADRA1BP35368 520 aa13.02□□□□□ -0.33
TRAPPC12-217ENST00000473348 MARCKSL1P49006 195 aa13.02□□□□□ -0.33
TRAPPC12-217ENST00000473348 HARS2P49590 506 aaKnown RBP13.02□□□□□ -0.33
TRAPPC12-217ENST00000473348 AIF1P55008 147 aa13.02□□□□□ -0.33
TRAPPC12-217ENST00000473348 USP4Q13107 963 aa13.02□□□□□ -0.33
TRAPPC12-217ENST00000473348 ARL13BQ3SXY8 428 aa13.02□□□□□ -0.33
TRAPPC12-217ENST00000473348 LEXMQ3ZCV2 418 aa13.02□□□□□ -0.33
TRAPPC12-217ENST00000473348 EFHC2Q5JST6 749 aa13.02□□□□□ -0.33
TRAPPC12-217ENST00000473348 MEI1Q5TIA1 1274 aa13.02□□□□□ -0.33
TRAPPC12-217ENST00000473348 LRRC38Q5VT99 294 aa13.02□□□□□ -0.33
TRAPPC12-217ENST00000473348 NYAP1Q6ZVC0 841 aa13.02□□□□□ -0.33
TRAPPC12-217ENST00000473348 POLNQ7Z5Q5 900 aa13.02□□□□□ -0.33
TRAPPC12-217ENST00000473348 UNC45BQ8IWX7 931 aa13.02□□□□□ -0.33
TRAPPC12-217ENST00000473348 ATP6V0D2Q8N8Y2 350 aa13.02□□□□□ -0.33
TRAPPC12-217ENST00000473348 SH3RF2Q8TEC5 729 aa13.02□□□□□ -0.33
TRAPPC12-217ENST00000473348 TEKT4Q8WW24 435 aa13.02□□□□□ -0.33
TRAPPC12-217ENST00000473348 SMARCD2Q92925 531 aa13.02□□□□□ -0.33
TRAPPC12-217ENST00000473348 CD101Q93033 1021 aa13.02□□□□□ -0.33
TRAPPC12-217ENST00000473348 ACSF2Q96CM8 615 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC12-217ENST00000473348 KIF9Q9HAQ2 790 aa13.02□□□□□ -0.33
TRAPPC12-217ENST00000473348 ANLNQ9NQW6 1124 aa13.02□□□□□ -0.33
TRAPPC12-217ENST00000473348 TMPRSS4Q9NRS4 437 aa13.02□□□□□ -0.33
TRAPPC12-217ENST00000473348 KLHL11Q9NVR0 708 aa13.02□□□□□ -0.33
TRAPPC12-217ENST00000473348 GPATCH2LQ9NWQ4 482 aa13.02□□□□□ -0.33
TRAPPC12-217ENST00000473348 LSM7Q9UK45 103 aaKnown RBP13.02□□□□□ -0.33
TRAPPC12-217ENST00000473348 FZD10Q9ULW2 581 aa13.02□□□□□ -0.33
TRAPPC12-217ENST00000473348 SH3BP1Q9Y3L3 701 aa13.02□□□□□ -0.33
TRAPPC12-217ENST00000473348 COL4A2P08572 1712 aa13.02□□□□□ -0.33
TRAPPC12-217ENST00000473348 MIF4GDA9UHW6 222 aaKnown RBP13.01□□□□□ -0.33
TRAPPC12-217ENST00000473348 SCAMP3O14828 347 aaKnown RBP13.01□□□□□ -0.33
TRAPPC12-217ENST00000473348 PAGE1O75459 146 aa13.01□□□□□ -0.33
TRAPPC12-217ENST00000473348 KRT1P04264 644 aa13.01□□□□□ -0.33
TRAPPC12-217ENST00000473348 RARAP10276 462 aa13.01□□□□□ -0.33
TRAPPC12-217ENST00000473348 TCF3P15923 654 aa13.01□□□□□ -0.33
TRAPPC12-217ENST00000473348 SP100P23497 879 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC12-217ENST00000473348 CTNNA2P26232 953 aa13.01□□□□□ -0.33
TRAPPC12-217ENST00000473348 DNA2P51530 1060 aa13.01□□□□□ -0.33
TRAPPC12-217ENST00000473348 ETF1P62495 437 aaKnown RBP13.01□□□□□ -0.33
TRAPPC12-217ENST00000473348 SCAPQ12770 1279 aa13.01□□□□□ -0.33
TRAPPC12-217ENST00000473348 ZNF77Q15935 545 aa13.01□□□□□ -0.33
TRAPPC12-217ENST00000473348 BOLA3Q53S33 107 aa13.01□□□□□ -0.33
TRAPPC12-217ENST00000473348 KCNT1Q5JUK3 1230 aa13.01□□□□□ -0.33
TRAPPC12-217ENST00000473348 ZFYVE27Q5T4F4 411 aa13.01□□□□□ -0.33
TRAPPC12-217ENST00000473348 ERMARDQ5T6L9 678 aa13.01□□□□□ -0.33
TRAPPC12-217ENST00000473348 OTOP3Q7RTS5 596 aa13.01□□□□□ -0.33
TRAPPC12-217ENST00000473348 DENND1CQ8IV53 801 aa13.01□□□□□ -0.33
TRAPPC12-217ENST00000473348 CELF5Q8N6W0 485 aaKnown RBP13.01□□□□□ -0.33
TRAPPC12-217ENST00000473348 RIN3Q8TB24 985 aa13.01□□□□□ -0.33
TRAPPC12-217ENST00000473348 HSPH1Q92598 858 aa13.01□□□□□ -0.33
TRAPPC12-217ENST00000473348 KRT35Q92764 455 aa13.01□□□□□ -0.33
TRAPPC12-217ENST00000473348 HES6Q96HZ4 224 aa13.01□□□□□ -0.33
TRAPPC12-217ENST00000473348 BTN2A3PQ96KV6 586 aa13.01□□□□□ -0.33
TRAPPC12-217ENST00000473348 WDR24Q96S15 920 aa13.01□□□□□ -0.33
TRAPPC12-217ENST00000473348 DCLK3Q9C098 648 aa13.01□□□□□ -0.33
TRAPPC12-217ENST00000473348 DHX35Q9H5Z1 703 aaKnown RBP13.01□□□□□ -0.33
TRAPPC12-217ENST00000473348 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.01□□□□□ -0.33
TRAPPC12-217ENST00000473348 SLC12A6Q9UHW9 1150 aa13.01□□□□□ -0.33
TRAPPC12-217ENST00000473348 XPO7Q9UIA9 1087 aaKnown RBP13.01□□□□□ -0.33
TRAPPC12-217ENST00000473348 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.01□□□□□ -0.33
TRAPPC12-217ENST00000473348 JRKLQ9Y4A0 524 aa13.01□□□□□ -0.33
TRAPPC12-217ENST00000473348 ZFP37Q9Y6Q3 630 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC12-217ENST00000473348 NYNRINQ9P2P1 1898 aaKnown RBP13.01□□□□□ -0.33
TRAPPC12-217ENST00000473348 EYSQ5T1H1 3165 aa13□□□□□ -0.33
TRAPPC12-217ENST00000473348 CCDC66A2RUB6 948 aa13□□□□□ -0.33
TRAPPC12-217ENST00000473348 ESPNB1AK53 854 aa13□□□□□ -0.33
TRAPPC12-217ENST00000473348 ENC1O14682 589 aa13□□□□□ -0.33
TRAPPC12-217ENST00000473348 GREM1O60565 184 aa13□□□□□ -0.33
TRAPPC12-217ENST00000473348 LATS1O95835 1130 aa13□□□□□ -0.33
TRAPPC12-217ENST00000473348 KLKB1P03952 638 aa13□□□□□ -0.33
TRAPPC12-217ENST00000473348 LAMP2P13473 410 aa13□□□□□ -0.33
TRAPPC12-217ENST00000473348 FCARP24071 287 aa13□□□□□ -0.33
TRAPPC12-217ENST00000473348 GGCXP38435 758 aa13□□□□□ -0.33
TRAPPC12-217ENST00000473348 VIPR2P41587 438 aa13□□□□□ -0.33
TRAPPC12-217ENST00000473348 SLC11A2P49281 568 aa13□□□□□ -0.33
TRAPPC12-217ENST00000473348 TFF2Q03403 129 aa13□□□□□ -0.33
TRAPPC12-217ENST00000473348 MTA1Q13330 715 aa13□□□□□ -0.33
TRAPPC12-217ENST00000473348 RPS6KA1Q15418 735 aa13□□□□□ -0.33
TRAPPC12-217ENST00000473348 SMAD2Q15796 467 aaKnown RBP13□□□□□ -0.33
TRAPPC12-217ENST00000473348 CA9Q16790 459 aa13□□□□□ -0.33
TRAPPC12-217ENST00000473348 ATP13A4Q4VNC1 1196 aa13□□□□□ -0.33
TRAPPC12-217ENST00000473348 PTCRAQ6ISU1 281 aaPredicted RBP13□□□□□ -0.33
TRAPPC12-217ENST00000473348 CHSY1Q86X52 802 aa13□□□□□ -0.33
TRAPPC12-217ENST00000473348 PSTKQ8IV42 348 aaKnown RBP13□□□□□ -0.33
TRAPPC12-217ENST00000473348 UBL4BQ8N7F7 174 aa13□□□□□ -0.33
TRAPPC12-217ENST00000473348 TDRD5Q8NAT2 981 aaKnown RBP13□□□□□ -0.33
TRAPPC12-217ENST00000473348 RSPRY1Q96DX4 576 aa13□□□□□ -0.33
TRAPPC12-217ENST00000473348 HAPLN3Q96S86 360 aa13□□□□□ -0.33
TRAPPC12-217ENST00000473348 TRPV4Q9HBA0 871 aa13□□□□□ -0.33
TRAPPC12-217ENST00000473348 PRDM6Q9NQX0 595 aa13□□□□□ -0.33
TRAPPC12-217ENST00000473348 DDX56Q9NY93 547 aaKnown RBP13□□□□□ -0.33
TRAPPC12-217ENST00000473348 PCDHA3Q9Y5H8 950 aa13□□□□□ -0.33
TRAPPC12-217ENST00000473348 SNX10Q9Y5X0 201 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms