RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 DPYDQ12882 1025 aa11.73□□□□□ -0.53
ACTB-209ENST00000473257 LRMPQ12912 555 aa11.73□□□□□ -0.53
ACTB-209ENST00000473257 ADAM9Q13443 819 aa11.73□□□□□ -0.53
ACTB-209ENST00000473257 ENPP2Q13822 863 aa11.73□□□□□ -0.53
ACTB-209ENST00000473257 ZNF423Q2M1K9 1284 aa11.73□□□□□ -0.53
ACTB-209ENST00000473257 HLA-BQ31612 363 aa11.73□□□□□ -0.53
ACTB-209ENST00000473257 FNDC3BQ53EP0 1204 aaKnown RBP11.73□□□□□ -0.53
ACTB-209ENST00000473257 CCDC157Q569K6 752 aa11.73□□□□□ -0.53
ACTB-209ENST00000473257 KCNT1Q5JUK3 1230 aa11.73□□□□□ -0.53
ACTB-209ENST00000473257 SERPINA13PQ6UXR4 307 aa11.73□□□□□ -0.53
ACTB-209ENST00000473257 INTS8Q75QN2 995 aaKnown RBP11.73□□□□□ -0.53
ACTB-209ENST00000473257 ANKS1BQ7Z6G8 1248 aa11.73□□□□□ -0.53
ACTB-209ENST00000473257 RABEPKQ7Z6M1 372 aa11.73□□□□□ -0.53
ACTB-209ENST00000473257 FMNL3Q8IVF7 1028 aa11.73□□□□□ -0.53
ACTB-209ENST00000473257 HSCBQ8IWL3 235 aa11.73□□□□□ -0.53
ACTB-209ENST00000473257 WFDC5Q8TCV5 224 aa11.73□□□□□ -0.53
ACTB-209ENST00000473257 DNASE2BQ8WZ79 361 aa11.73□□□□□ -0.53
ACTB-209ENST00000473257 PRCCQ92733 491 aaPredicted RBP11.73□□□□□ -0.53
ACTB-209ENST00000473257 FOXJ1Q92949 421 aa11.73□□□□□ -0.53
ACTB-209ENST00000473257 TMEM176AQ96HP8 235 aa11.73□□□□□ -0.53
ACTB-209ENST00000473257 TMEM8AQ9HCN3 771 aa11.73□□□□□ -0.53
ACTB-209ENST00000473257 PNPLA8Q9NP80 782 aa11.73□□□□□ -0.53
ACTB-209ENST00000473257 PCOLCE2Q9UKZ9 415 aa11.73□□□□□ -0.53
ACTB-209ENST00000473257 CFAP45Q9UL16 551 aa11.73□□□□□ -0.53
ACTB-209ENST00000473257 CKAP5Q14008 2032 aa11.72□□□□□ -0.53
ACTB-209ENST00000473257 FAM149AA5PLN7 773 aa11.72□□□□□ -0.53
ACTB-209ENST00000473257 METTL12A8MUP2 240 aa11.72□□□□□ -0.53
ACTB-209ENST00000473257 BCAT2O15382 392 aaPredicted RBP11.72□□□□□ -0.53
ACTB-209ENST00000473257 GABBR2O75899 941 aa11.72□□□□□ -0.53
ACTB-209ENST00000473257 RHOBTB3O94955 611 aa11.72□□□□□ -0.53
ACTB-209ENST00000473257 ZBED1O96006 694 aa11.72□□□□□ -0.53
ACTB-209ENST00000473257 HLA-FP30511 346 aa11.72□□□□□ -0.53
ACTB-209ENST00000473257 PSMC2P35998 433 aaKnown RBP11.72□□□□□ -0.53
ACTB-209ENST00000473257 SYKP43405 635 aa11.72□□□□□ -0.53
ACTB-209ENST00000473257 RGS7P49802 495 aa11.72□□□□□ -0.53
ACTB-209ENST00000473257 MXI1P50539 228 aa11.72□□□□□ -0.53
ACTB-209ENST00000473257 CLDN6P56747 220 aa11.72□□□□□ -0.53
ACTB-209ENST00000473257 COG7P83436 770 aa11.72□□□□□ -0.53
ACTB-209ENST00000473257 IL9RQ01113 521 aa11.72□□□□□ -0.53
ACTB-209ENST00000473257 ADIGQ0VDE8 80 aa11.72□□□□□ -0.53
ACTB-209ENST00000473257 CBWD6Q4V339 395 aa11.72□□□□□ -0.53
ACTB-209ENST00000473257 ZCWPW2Q504Y3 356 aa11.72□□□□□ -0.53
ACTB-209ENST00000473257 RAB41Q5JT25 222 aa11.72□□□□□ -0.53
ACTB-209ENST00000473257 CBWD3Q5JTY5 395 aa11.72□□□□□ -0.53
ACTB-209ENST00000473257 CBWD5Q5RIA9 395 aa11.72□□□□□ -0.53
ACTB-209ENST00000473257 RFWD3Q6PCD5 774 aa11.72□□□□□ -0.53
ACTB-209ENST00000473257 PROSER1Q86XN7 944 aa11.72□□□□□ -0.53
ACTB-209ENST00000473257 C1orf216Q8TAB5 229 aa11.72□□□□□ -0.53
ACTB-209ENST00000473257 ERCC4Q92889 916 aaPredicted RBP11.72□□□□□ -0.53
ACTB-209ENST00000473257 MYEOVQ96EZ4 313 aa11.72□□□□□ -0.53
ACTB-209ENST00000473257 SPATA32Q96LK8 384 aa11.72□□□□□ -0.53
ACTB-209ENST00000473257 GDPD2Q9HCC8 539 aa11.72□□□□□ -0.53
ACTB-209ENST00000473257 ABCB8Q9NUT2 735 aa11.72□□□□□ -0.53
ACTB-209ENST00000473257 SUSD2Q9UGT4 822 aa11.72□□□□□ -0.53
ACTB-209ENST00000473257 STRIP2Q9ULQ0 834 aa11.72□□□□□ -0.53
ACTB-209ENST00000473257 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.72□□□□□ -0.533e-8■□□□□ 8.2
ACTB-209ENST00000473257 RAXQ9Y2V3 346 aa11.72□□□□□ -0.53
ACTB-209ENST00000473257 SNX11Q9Y5W9 270 aa11.72□□□□□ -0.53
ACTB-209ENST00000473257 FAM221BA6H8Z2 402 aa11.71□□□□□ -0.53
ACTB-209ENST00000473257 YJEFN3A6XGL0 299 aa11.71□□□□□ -0.53
ACTB-209ENST00000473257 E7ENQ6 273 aa11.71□□□□□ -0.53
ACTB-209ENST00000473257 H0Y626 953 aa11.71□□□□□ -0.53
ACTB-209ENST00000473257 TRIM16O95361 564 aa11.71□□□□□ -0.53
ACTB-209ENST00000473257 CYBBP04839 570 aa11.71□□□□□ -0.53
ACTB-209ENST00000473257 ACADMP11310 421 aa11.71□□□□□ -0.53
ACTB-209ENST00000473257 CD19P15391 556 aa11.71□□□□□ -0.53
ACTB-209ENST00000473257 CHKAP35790 457 aa11.71□□□□□ -0.53
ACTB-209ENST00000473257 PSEN1P49768 467 aa11.71□□□□□ -0.53
ACTB-209ENST00000473257 SLC14A1Q13336 389 aa11.71□□□□□ -0.53
ACTB-209ENST00000473257 TRIP4Q15650 581 aaPredicted RBP11.71□□□□□ -0.53
ACTB-209ENST00000473257 KIF19Q2TAC6 998 aa11.71□□□□□ -0.53
ACTB-209ENST00000473257 COL28A1Q2UY09 1125 aa11.71□□□□□ -0.53
ACTB-209ENST00000473257 DCAF17Q5H9S7 520 aaPredicted RBP11.71□□□□□ -0.53
ACTB-209ENST00000473257 PRAMEF14Q5SWL7 426 aa11.71□□□□□ -0.53
ACTB-209ENST00000473257 KRT39Q6A163 491 aa11.71□□□□□ -0.53
ACTB-209ENST00000473257 CCNI2Q6ZMN8 369 aaPredicted RBP11.71□□□□□ -0.53
ACTB-209ENST00000473257 TADA2BQ86TJ2 420 aa11.71□□□□□ -0.53
ACTB-209ENST00000473257 METTL3Q86U44 580 aaKnown RBP11.71□□□□□ -0.53
ACTB-209ENST00000473257 ANKRD52Q8NB46 1076 aa11.71□□□□□ -0.53
ACTB-209ENST00000473257 CLEC4CQ8WTT0 213 aa11.71□□□□□ -0.53
ACTB-209ENST00000473257 UCMAQ8WVF2 138 aa11.71□□□□□ -0.53
ACTB-209ENST00000473257 ADAMTS14Q8WXS8 1223 aa11.71□□□□□ -0.53
ACTB-209ENST00000473257 DCLK3Q9C098 648 aa11.71□□□□□ -0.53
ACTB-209ENST00000473257 TM7SF3Q9NS93 570 aa11.71□□□□□ -0.53
ACTB-209ENST00000473257 RAB20Q9NX57 234 aa11.71□□□□□ -0.53
ACTB-209ENST00000473257 TOR4AQ9NXH8 423 aa11.71□□□□□ -0.53
ACTB-209ENST00000473257 ZNF510Q9Y2H8 683 aa11.71□□□□□ -0.53
ACTB-209ENST00000473257 PTPRBP23467 1997 aa11.7□□□□□ -0.54
ACTB-209ENST00000473257 ADAMTS20P59510 1910 aa11.7□□□□□ -0.54
ACTB-209ENST00000473257 TMEM131Q92545 1883 aa11.7□□□□□ -0.54
ACTB-209ENST00000473257 SETXQ7Z333 2677 aaKnown RBP11.7□□□□□ -0.54
ACTB-209ENST00000473257 MAPK13O15264 365 aa11.7□□□□□ -0.54
ACTB-209ENST00000473257 KALRNO60229 2985 aa11.7□□□□□ -0.54
ACTB-209ENST00000473257 FSBPO95073 299 aa11.7□□□□□ -0.54
ACTB-209ENST00000473257 LCP1P13796 627 aa11.7□□□□□ -0.54
ACTB-209ENST00000473257 TRIM21P19474 475 aaKnown RBP11.7□□□□□ -0.54
ACTB-209ENST00000473257 CD70P32970 193 aa11.7□□□□□ -0.54
ACTB-209ENST00000473257 RDXP35241 583 aaKnown RBP11.7□□□□□ -0.54
ACTB-209ENST00000473257 MATKP42679 507 aa11.7□□□□□ -0.54
ACTB-209ENST00000473257 PMS1P54277 932 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms