RNA–Protein interactions for RNA: ENST00000473252.5

C9orf85-204, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 5

Gene C9orf85, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-204ENST00000473252 TMEM35BQ8NCS4 154 aa13.19□□□□□ -0.3
C9orf85-204ENST00000473252 C1orf131Q8NDD1 294 aaKnown RBP13.19□□□□□ -0.3
C9orf85-204ENST00000473252 DQX1Q8TE96 717 aaKnown RBP13.19□□□□□ -0.3
C9orf85-204ENST00000473252 IPO4Q8TEX9 1081 aaKnown RBP13.19□□□□□ -0.3
C9orf85-204ENST00000473252 TMA16Q96EY4 203 aaKnown RBP13.19□□□□□ -0.3
C9orf85-204ENST00000473252 SLC39A13Q96H72 371 aa13.19□□□□□ -0.3
C9orf85-204ENST00000473252 LSM14BQ9BX40 385 aaKnown RBP13.19□□□□□ -0.3
C9orf85-204ENST00000473252 TMEM63CQ9P1W3 806 aa13.19□□□□□ -0.3
C9orf85-204ENST00000473252 CYTH4Q9UIA0 394 aa13.19□□□□□ -0.3
C9orf85-204ENST00000473252 AJAP1Q9UKB5 411 aaPredicted RBP13.19□□□□□ -0.3
C9orf85-204ENST00000473252 NAALADL1Q9UQQ1 740 aa13.19□□□□□ -0.3
C9orf85-204ENST00000473252 FHOD1Q9Y613 1164 aa13.19□□□□□ -0.3
C9orf85-204ENST00000473252 TYW5A2RUC4 315 aaKnown RBP13.18□□□□□ -0.3
C9orf85-204ENST00000473252 SMTNL1A8MU46 457 aa13.18□□□□□ -0.3
C9orf85-204ENST00000473252 PRRT4C9JH25 899 aa13.18□□□□□ -0.3
C9orf85-204ENST00000473252 F8VZ95 297 aa13.18□□□□□ -0.3
C9orf85-204ENST00000473252 SGK1O00141 431 aa13.18□□□□□ -0.3
C9orf85-204ENST00000473252 ZBTB24O43167 697 aaPredicted RBP13.18□□□□□ -0.3
C9orf85-204ENST00000473252 HSF2BPO75031 334 aa13.18□□□□□ -0.3
C9orf85-204ENST00000473252 ADAM23O75077 832 aa13.18□□□□□ -0.3
C9orf85-204ENST00000473252 RHOBTB1O94844 696 aa13.18□□□□□ -0.3
C9orf85-204ENST00000473252 LSM8O95777 96 aaKnown RBP13.18□□□□□ -0.3
C9orf85-204ENST00000473252 IGLV3-25P01717 112 aa13.18□□□□□ -0.3
C9orf85-204ENST00000473252 SLC2A3P11169 496 aa13.18□□□□□ -0.3
C9orf85-204ENST00000473252 ZNF18P17022 549 aa13.18□□□□□ -0.3
C9orf85-204ENST00000473252 SDHBP21912 280 aa13.18□□□□□ -0.3
C9orf85-204ENST00000473252 GBP1P32455 592 aa13.18□□□□□ -0.3
C9orf85-204ENST00000473252 SCNN1AP37088 669 aa13.18□□□□□ -0.3
C9orf85-204ENST00000473252 COPB1P53618 953 aaKnown RBP13.18□□□□□ -0.3
C9orf85-204ENST00000473252 TYRO3Q06418 890 aa13.18□□□□□ -0.3
C9orf85-204ENST00000473252 EIF4EBP2Q13542 120 aaPredicted RBP13.18□□□□□ -0.3
C9orf85-204ENST00000473252 NCAPHQ15003 741 aa13.18□□□□□ -0.3
C9orf85-204ENST00000473252 RNF43Q68DV7 783 aa13.18□□□□□ -0.3
C9orf85-204ENST00000473252 TMEM92Q6UXU6 159 aa13.18□□□□□ -0.3
C9orf85-204ENST00000473252 TOGARAM2Q6ZUX3 1019 aa13.18□□□□□ -0.3
C9orf85-204ENST00000473252 ANKS1BQ7Z6G8 1248 aa13.18□□□□□ -0.3
C9orf85-204ENST00000473252 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.18□□□□□ -0.3
C9orf85-204ENST00000473252 MSANTD4Q8NCY6 345 aa13.18□□□□□ -0.3
C9orf85-204ENST00000473252 ZNF397Q8NF99 534 aaPredicted RBP13.18□□□□□ -0.3
C9orf85-204ENST00000473252 WFIKKN2Q8TEU8 576 aa13.18□□□□□ -0.3
C9orf85-204ENST00000473252 PIWIL1Q96J94 861 aaKnown RBP13.18□□□□□ -0.3
C9orf85-204ENST00000473252 CPXM1Q96SM3 734 aa13.18□□□□□ -0.3
C9orf85-204ENST00000473252 GABRG3Q99928 467 aa13.18□□□□□ -0.3
C9orf85-204ENST00000473252 PDCL3Q9H2J4 239 aa13.18□□□□□ -0.3
C9orf85-204ENST00000473252 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.18□□□□□ -0.3
C9orf85-204ENST00000473252 RRN3Q9NYV6 651 aa13.18□□□□□ -0.3
C9orf85-204ENST00000473252 PLK2Q9NYY3 685 aa13.18□□□□□ -0.3
C9orf85-204ENST00000473252 SLC12A6Q9UHW9 1150 aa13.18□□□□□ -0.3
C9orf85-204ENST00000473252 PCDHGA5Q9Y5G8 931 aa13.18□□□□□ -0.3
C9orf85-204ENST00000473252 VPS13AQ96RL7 3174 aa13.17□□□□□ -0.3
C9orf85-204ENST00000473252 LGALS16A8MUM7 142 aa13.17□□□□□ -0.3
C9orf85-204ENST00000473252 TRIM24O15164 1050 aa13.17□□□□□ -0.3
C9orf85-204ENST00000473252 MSI1O43347 362 aaKnown RBP13.17□□□□□ -0.3
C9orf85-204ENST00000473252 TRUB2O95900 331 aaKnown RBP13.17□□□□□ -0.3
C9orf85-204ENST00000473252 APOEP02649 317 aa13.17□□□□□ -0.3
C9orf85-204ENST00000473252 HOXB2P14652 356 aa13.17□□□□□ -0.3
C9orf85-204ENST00000473252 HOXD9P28356 352 aaPredicted RBP13.17□□□□□ -0.3
C9orf85-204ENST00000473252 GABRB2P47870 512 aa13.17□□□□□ -0.3
C9orf85-204ENST00000473252 PXNP49023 591 aaPredicted RBP13.17□□□□□ -0.3
C9orf85-204ENST00000473252 CDK17Q00537 523 aa13.17□□□□□ -0.3
C9orf85-204ENST00000473252 SLC6A3Q01959 620 aa13.17□□□□□ -0.3
C9orf85-204ENST00000473252 ENPP2Q13822 863 aa13.17□□□□□ -0.3
C9orf85-204ENST00000473252 PIK3R6Q5UE93 754 aa13.17□□□□□ -0.3
C9orf85-204ENST00000473252 SYPL2Q5VXT5 272 aa13.17□□□□□ -0.3
C9orf85-204ENST00000473252 SLC26A9Q7LBE3 791 aa13.17□□□□□ -0.3
C9orf85-204ENST00000473252 SFTPA1Q8IWL2 248 aa13.17□□□□□ -0.3
C9orf85-204ENST00000473252 CHPFQ8IZ52 775 aa13.17□□□□□ -0.3
C9orf85-204ENST00000473252 FAM160A2Q8N612 972 aaPredicted RBP13.17□□□□□ -0.3
C9orf85-204ENST00000473252 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.17□□□□□ -0.3
C9orf85-204ENST00000473252 MDGA1Q8NFP4 955 aa13.17□□□□□ -0.3
C9orf85-204ENST00000473252 OLIG1Q8TAK6 271 aa13.17□□□□□ -0.3
C9orf85-204ENST00000473252 DDX1Q92499 740 aaKnown RBP13.17□□□□□ -0.3
C9orf85-204ENST00000473252 FCRL2Q96LA5 508 aaPredicted RBP13.17□□□□□ -0.3
C9orf85-204ENST00000473252 SLC2A13Q96QE2 648 aa13.17□□□□□ -0.3
C9orf85-204ENST00000473252 ERGIC2Q96RQ1 377 aa13.17□□□□□ -0.3
C9orf85-204ENST00000473252 GANQ9H2C0 597 aa13.17□□□□□ -0.3
C9orf85-204ENST00000473252 SYNCQ9H7C4 482 aa13.17□□□□□ -0.3
C9orf85-204ENST00000473252 THAP10Q9P2Z0 257 aaPredicted RBP13.17□□□□□ -0.3
C9orf85-204ENST00000473252 HCN2Q9UL51 889 aa13.17□□□□□ -0.3
C9orf85-204ENST00000473252 CEP192Q8TEP8 1941 aa13.17□□□□□ -0.3
C9orf85-204ENST00000473252 THADAQ6YHU6 1953 aa13.16□□□□□ -0.3
C9orf85-204ENST00000473252 PRR5-ARHGAP8B1AHC4 643 aa13.16□□□□□ -0.3
C9orf85-204ENST00000473252 NOS2P35228 1153 aa13.16□□□□□ -0.3
C9orf85-204ENST00000473252 JAM2P57087 298 aa13.16□□□□□ -0.3
C9orf85-204ENST00000473252 ARHGAP8P85298 464 aa13.16□□□□□ -0.3
C9orf85-204ENST00000473252 LMNB2Q03252 620 aa13.16□□□□□ -0.3
C9orf85-204ENST00000473252 SRSF5Q13243 272 aaKnown RBP13.16□□□□□ -0.3
C9orf85-204ENST00000473252 ELF2Q15723 593 aa13.16□□□□□ -0.3
C9orf85-204ENST00000473252 KLHL40Q2TBA0 621 aa13.16□□□□□ -0.3
C9orf85-204ENST00000473252 PLK5Q496M5 336 aa13.16□□□□□ -0.3
C9orf85-204ENST00000473252 DCAF6Q58WW2 860 aa13.16□□□□□ -0.3
C9orf85-204ENST00000473252 SPDYCQ5MJ68 293 aa13.16□□□□□ -0.3
C9orf85-204ENST00000473252 ACBD5Q5T8D3 534 aaPredicted RBP13.16□□□□□ -0.3
C9orf85-204ENST00000473252 EGFLAMQ63HQ2 1017 aa13.16□□□□□ -0.3
C9orf85-204ENST00000473252 OR6B2Q6IFH4 312 aa13.16□□□□□ -0.3
C9orf85-204ENST00000473252 ANO7Q6IWH7 933 aa13.16□□□□□ -0.3
C9orf85-204ENST00000473252 OLFML1Q6UWY5 402 aa13.16□□□□□ -0.3
C9orf85-204ENST00000473252 ARCQ7LC44 396 aa13.16□□□□□ -0.3
C9orf85-204ENST00000473252 KIAA0907Q7Z7F0 614 aaPredicted RBP13.16□□□□□ -0.3
C9orf85-204ENST00000473252 TAC4Q86UU9 113 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms