RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 CHST3Q7LGC8 479 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 HEATR3Q7Z4Q2 680 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.29□□□□□ -1.4
RTF1-203ENST00000473214 NRAPQ86VF7 1730 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 TMEM200AQ86VY9 491 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 OSTM1Q86WC4 334 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 MRPL41Q8IXM3 137 aaKnown RBP6.29□□□□□ -1.4
RTF1-203ENST00000473214 WDTC1Q8N5D0 677 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 BBOF1Q8ND07 529 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 OR52K1Q8NGK4 314 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 CCHCR1Q8TD31 782 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 CYB5D2Q8WUJ1 264 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 WDR89Q96FK6 387 aaPredicted RBP6.29□□□□□ -1.4
RTF1-203ENST00000473214 PDLIM5Q96HC4 596 aaKnown RBP6.29□□□□□ -1.4
RTF1-203ENST00000473214 NAF1Q96HR8 494 aaKnown RBP6.29□□□□□ -1.4
RTF1-203ENST00000473214 GBP4Q96PP9 640 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 ABCA3Q99758 1704 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 RTKNQ9BST9 563 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 MAGEB5Q9BZ81 275 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 TWSG1Q9GZX9 223 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 IQCGQ9H095 443 aaKnown RBP6.29□□□□□ -1.4
RTF1-203ENST00000473214 SEMA4AQ9H3S1 761 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 DNAJC18Q9H819 358 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 C17orf75Q9HAS0 396 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 SMURF1Q9HCE7 757 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 ACSS2Q9NR19 701 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 SEMA3GQ9NS98 782 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 TAS2R10Q9NYW0 307 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 IL19Q9UHD0 177 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 TSPYL4Q9UJ04 414 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 CORO1CQ9ULV4 474 aaPredicted RBP6.29□□□□□ -1.4
RTF1-203ENST00000473214 MTO1Q9Y2Z2 717 aaKnown RBP6.29□□□□□ -1.4
RTF1-203ENST00000473214 PCDHA3Q9Y5H8 950 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 FPGT-TNNI3KV9GXZ4 949 aa6.29□□□□□ -1.4
RTF1-203ENST00000473214 CEP350Q5VT06 3117 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 DISP2A7MBM2 1401 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 DAPK1P53355 1430 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 URADA6NGE7 173 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 CLCA1A8K7I4 914 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 ZNF561-AS1K7EIQ3 104 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 SCAMP1O15126 338 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 ENTPD3O75355 529 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 CYP1A2P05177 515 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 RPLP2P05387 115 aaKnown RBP6.28□□□□□ -1.4
RTF1-203ENST00000473214 INHBAP08476 426 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 GHRP10912 638 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 UBL4AP11441 157 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 PDGFRAP16234 1089 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 IDUAP35475 653 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 PPARGP37231 505 aaPredicted RBP6.28□□□□□ -1.4
RTF1-203ENST00000473214 CD96P40200 585 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 USP8P40818 1118 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 RGS3P49796 1198 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 ZNF81P51508 661 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 LGALS4P56470 323 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 RNF4P78317 190 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 MRPS5P82675 430 aaKnown RBP6.28□□□□□ -1.4
RTF1-203ENST00000473214 HNRNPUQ00839 825 aaKnown RBP eCLIP6.28□□□□□ -1.4
RTF1-203ENST00000473214 RELQ04864 619 aaPredicted RBP6.28□□□□□ -1.4
RTF1-203ENST00000473214 MESP2Q0VG99 397 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 ADAM9Q13443 819 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 RIPK1Q13546 671 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 NR0B2Q15466 257 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 FILIP1LQ4L180 1135 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 DNTTIP2Q5QJE6 756 aaKnown RBP6.28□□□□□ -1.4
RTF1-203ENST00000473214 PLEKHS1Q5SXH7 462 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 ATXN7L2Q5T6C5 722 aaPredicted RBP6.28□□□□□ -1.4
RTF1-203ENST00000473214 ARL6IP4Q66PJ3 421 aaKnown RBP6.28□□□□□ -1.4
RTF1-203ENST00000473214 SLC25A24Q6NUK1 477 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 ESPNLQ6ZVH7 1005 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 MARK2Q7KZI7 788 aaKnown RBP6.28□□□□□ -1.4
RTF1-203ENST00000473214 PLPPR4Q7Z2D5 763 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 CCDC103Q8IW40 242 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 SYCP3Q8IZU3 236 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 GALNT4Q8N4A0 578 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 CELF5Q8N6W0 485 aaKnown RBP6.28□□□□□ -1.4
RTF1-203ENST00000473214 FRMD1Q8N878 549 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 C3orf20Q8ND61 904 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 STAMQ92783 540 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 KCNN1Q92952 543 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 FER1L6-AS2Q96M78 137 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 NLRP4Q96MN2 994 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 FANCD2OSQ96PS1 177 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 ABHD1Q96SE0 405 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 PKP4Q99569 1192 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 KCNJ15Q99712 375 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 DSCC1Q9BVC3 393 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 CARD11Q9BXL7 1154 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 GCOM2Q9BZD3 368 aaPredicted RBP6.28□□□□□ -1.4
RTF1-203ENST00000473214 LRRCC1Q9C099 1032 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 HSD3B7Q9H2F3 369 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 A1CFQ9NQ94 594 aaKnown RBP6.28□□□□□ -1.4
RTF1-203ENST00000473214 POLE3Q9NRF9 147 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 GLRX2Q9NS18 164 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 SLC35D1Q9NTN3 355 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 TBC1D23Q9NUY8 699 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 USP40Q9NVE5 1235 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 PNPOQ9NVS9 261 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 PCDHA13Q9Y5I0 950 aa6.28□□□□□ -1.4
RTF1-203ENST00000473214 ST14Q9Y5Y6 855 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms