RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 ZFP42Q96MM3 310 aa12.6□□□□□ -0.39
IRF1-208ENST00000472045 PNKPQ96T60 521 aa12.6□□□□□ -0.39
IRF1-208ENST00000472045 CREBZFQ9NS37 354 aa12.6□□□□□ -0.39
IRF1-208ENST00000472045 EVA1BQ9NVM1 165 aa12.6□□□□□ -0.39
IRF1-208ENST00000472045 RIC8BQ9NVN3 520 aa12.6□□□□□ -0.39
IRF1-208ENST00000472045 RNF186Q9NXI6 227 aa12.6□□□□□ -0.39
IRF1-208ENST00000472045 DYRK1BQ9Y463 629 aa12.6□□□□□ -0.39
IRF1-208ENST00000472045 HIRAP54198 1017 aaPredicted RBP12.6□□□□□ -0.39
IRF1-208ENST00000472045 SNRPD1P62314 119 aaKnown RBP12.6□□□□□ -0.39
IRF1-208ENST00000472045 ZACNQ401N2 412 aa12.6□□□□□ -0.39
IRF1-208ENST00000472045 BEND6Q5SZJ8 279 aaPredicted RBP12.6□□□□□ -0.39
IRF1-208ENST00000472045 GBP7Q8N8V2 638 aaPredicted RBP12.6□□□□□ -0.39
IRF1-208ENST00000472045 MAB21L3Q8N8X9 362 aa12.6□□□□□ -0.39
IRF1-208ENST00000472045 GRIN3AQ8TCU5 1115 aa12.6□□□□□ -0.39
IRF1-208ENST00000472045 SGF29Q96ES7 293 aa12.6□□□□□ -0.39
IRF1-208ENST00000472045 GYG2O15488 501 aa12.6□□□□□ -0.39
IRF1-208ENST00000472045 TIMM44O43615 452 aa12.6□□□□□ -0.39
IRF1-208ENST00000472045 VSNL1P62760 191 aa12.6□□□□□ -0.39
IRF1-208ENST00000472045 HYIQ5T013 277 aa12.6□□□□□ -0.39
IRF1-208ENST00000472045 PPP4R4Q6NUP7 873 aa12.6□□□□□ -0.39
IRF1-208ENST00000472045 FUT10Q6P4F1 479 aa12.6□□□□□ -0.39
IRF1-208ENST00000472045 USP45Q70EL2 814 aa12.6□□□□□ -0.39
IRF1-208ENST00000472045 DNAAF5Q86Y56 855 aa12.6□□□□□ -0.39
IRF1-208ENST00000472045 HTR3CQ8WXA8 447 aa12.6□□□□□ -0.39
IRF1-208ENST00000472045 TCF25Q9BQ70 676 aa12.6□□□□□ -0.39
IRF1-208ENST00000472045 CCDC3Q9BQI4 270 aa12.6□□□□□ -0.39
IRF1-208ENST00000472045 PDZD7Q9H5P4 517 aa12.6□□□□□ -0.39
IRF1-208ENST00000472045 NMRK1Q9NWW6 199 aa12.6□□□□□ -0.39
IRF1-208ENST00000472045 AFDNP55196 1824 aaKnown RBP12.6□□□□□ -0.39
IRF1-208ENST00000472045 A0A0B4J269 797 aa12.6□□□□□ -0.39
IRF1-208ENST00000472045 CLDN5O00501 218 aa12.6□□□□□ -0.39
IRF1-208ENST00000472045 CCDC22O60826 627 aa12.6□□□□□ -0.39
IRF1-208ENST00000472045 CCND3P30281 292 aaPredicted RBP12.6□□□□□ -0.39
IRF1-208ENST00000472045 DDX39BQ13838 428 aaKnown RBP12.6□□□□□ -0.39
IRF1-208ENST00000472045 CCNG2Q16589 344 aa12.6□□□□□ -0.39
IRF1-208ENST00000472045 DOK6Q6PKX4 331 aa12.6□□□□□ -0.39
IRF1-208ENST00000472045 FAM183BPQ6ZVS7 135 aa12.6□□□□□ -0.39
IRF1-208ENST00000472045 CEP68Q76N32 757 aa12.6□□□□□ -0.39
IRF1-208ENST00000472045 CXorf40AQ8TE69 158 aa12.6□□□□□ -0.39
IRF1-208ENST00000472045 GMLQ99445 158 aa12.6□□□□□ -0.39
IRF1-208ENST00000472045 KLF6Q99612 283 aaPredicted RBP12.6□□□□□ -0.39
IRF1-208ENST00000472045 POLR1EQ9GZS1 481 aaKnown RBP12.6□□□□□ -0.39
IRF1-208ENST00000472045 AKAP7Q9P0M2 348 aaPredicted RBP12.6□□□□□ -0.39
IRF1-208ENST00000472045 O00370 1275 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 MTA2O94776 668 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 FGFR1P11362 822 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 CDH17Q12864 832 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 FAM136AQ96C01 138 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 RIPOR3Q96MK2 946 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 NDE1Q9NXR1 346 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 ZNF510Q9Y2H8 683 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 Q9Y3F1 56 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 CAPN6Q9Y6Q1 641 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 DUSP10Q9Y6W6 482 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 EOMESO95936 686 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 CTSEP14091 401 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 POU6F1Q14863 301 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 ECM1Q16610 540 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 SETMARQ53H47 684 aaPredicted RBP12.59□□□□□ -0.39
IRF1-208ENST00000472045 PTAR1Q7Z6K3 402 aaPredicted RBP12.59□□□□□ -0.39
IRF1-208ENST00000472045 CHPFQ8IZ52 775 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.59□□□□□ -0.39
IRF1-208ENST00000472045 FBXO36Q8NEA4 188 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 ZNF384Q8TF68 577 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 TMEM159Q96B96 161 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 DHX33Q9H6R0 707 aaKnown RBP12.59□□□□□ -0.39
IRF1-208ENST00000472045 UTP6Q9NYH9 597 aaKnown RBP12.59□□□□□ -0.39
IRF1-208ENST00000472045 SPASTQ9UBP0 616 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 LRRC37A3O60309 1634 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 TRIM49D1C9J1S8 452 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 GJB6O95452 261 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 ARL2P36404 184 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 CPA6Q8N4T0 437 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 RFWD2Q8NHY2 731 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 ZNF296Q8WUU4 475 aaPredicted RBP12.59□□□□□ -0.39
IRF1-208ENST00000472045 PRPF18Q99633 342 aaKnown RBP12.59□□□□□ -0.39
IRF1-208ENST00000472045 MRPL45Q9BRJ2 306 aaKnown RBP12.59□□□□□ -0.39
IRF1-208ENST00000472045 PYGBP11216 843 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 STMN1P16949 149 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 GRB14Q14449 540 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 TRIM68Q6AZZ1 485 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 NLRP9Q7RTR0 991 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 LCA5Q86VQ0 697 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 LRRC6Q86X45 466 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 TNS4Q8IZW8 715 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 NPLOC4Q8TAT6 608 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 AHCYL2Q96HN2 611 aaKnown RBP12.59□□□□□ -0.39
IRF1-208ENST00000472045 PAWRQ96IZ0 340 aaKnown RBP12.59□□□□□ -0.39
IRF1-208ENST00000472045 ISCUQ9H1K1 167 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 MIR1-1HGQ9H1L0 117 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 FAM153AQ9UHL3 310 aa12.59□□□□□ -0.39
IRF1-208ENST00000472045 APOA4P06727 396 aa12.58□□□□□ -0.39
IRF1-208ENST00000472045 SLC10A3P09131 477 aa12.58□□□□□ -0.39
IRF1-208ENST00000472045 ALOX15P16050 662 aaPredicted RBP12.58□□□□□ -0.39
IRF1-208ENST00000472045 PTPN3P26045 913 aa12.58□□□□□ -0.39
IRF1-208ENST00000472045 HALP42357 657 aa12.58□□□□□ -0.39
IRF1-208ENST00000472045 VSTM1Q6UX27 236 aa12.58□□□□□ -0.39
IRF1-208ENST00000472045 GLT6D1Q7Z4J2 308 aa12.58□□□□□ -0.39
IRF1-208ENST00000472045 EIF2AQ9BY44 585 aaKnown RBP12.58□□□□□ -0.39
IRF1-208ENST00000472045 DUSP16Q9BY84 665 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms