RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 AVPR1AP37288 418 aa19.92■□□□□ 0.78
PSPC1-203ENST00000471658 COG7P83436 770 aa19.92■□□□□ 0.78
PSPC1-203ENST00000471658 NNTQ13423 1086 aa19.92■□□□□ 0.78
PSPC1-203ENST00000471658 PPP2R5DQ14738 602 aa19.92■□□□□ 0.78
PSPC1-203ENST00000471658 BOLA3Q53S33 107 aa19.92■□□□□ 0.78
PSPC1-203ENST00000471658 LRRC38Q5VT99 294 aa19.92■□□□□ 0.78
PSPC1-203ENST00000471658 DCAF12L1Q5VU92 463 aa19.92■□□□□ 0.78
PSPC1-203ENST00000471658 RIN3Q8TB24 985 aa19.92■□□□□ 0.78
PSPC1-203ENST00000471658 RAPGEF5Q92565 580 aa19.92■□□□□ 0.78
PSPC1-203ENST00000471658 USP13Q92995 863 aaPredicted RBP19.92■□□□□ 0.78
PSPC1-203ENST00000471658 RIPOR3Q96MK2 946 aa19.92■□□□□ 0.78
PSPC1-203ENST00000471658 USP15Q9Y4E8 981 aaPredicted RBP19.92■□□□□ 0.78
PSPC1-203ENST00000471658 CCDC66A2RUB6 948 aa19.91■□□□□ 0.78
PSPC1-203ENST00000471658 CTAGE9A4FU28 777 aa19.91■□□□□ 0.78
PSPC1-203ENST00000471658 GRXCR2A6NFK2 248 aa19.91■□□□□ 0.78
PSPC1-203ENST00000471658 MIF4GDA9UHW6 222 aaKnown RBP19.91■□□□□ 0.78
PSPC1-203ENST00000471658 CD48P09326 243 aa19.91■□□□□ 0.78
PSPC1-203ENST00000471658 KPNA1P52294 538 aaPredicted RBP19.91■□□□□ 0.78
PSPC1-203ENST00000471658 RING1Q06587 406 aa19.91■□□□□ 0.78
PSPC1-203ENST00000471658 ZNF211Q13398 564 aaPredicted RBP19.91■□□□□ 0.78
PSPC1-203ENST00000471658 LLGL1Q15334 1064 aa19.91■□□□□ 0.78
PSPC1-203ENST00000471658 BRMS1LQ5PSV4 323 aa19.91■□□□□ 0.78
PSPC1-203ENST00000471658 ZFYVE27Q5T4F4 411 aa19.91■□□□□ 0.78
PSPC1-203ENST00000471658 ANKS1BQ7Z6G8 1248 aa19.91■□□□□ 0.78
PSPC1-203ENST00000471658 ARID3BQ8IVW6 561 aaPredicted RBP19.91■□□□□ 0.78
PSPC1-203ENST00000471658 ZSCAN18Q8TBC5 510 aaPredicted RBP19.91■□□□□ 0.78
PSPC1-203ENST00000471658 NTAN1Q96AB6 310 aa19.91■□□□□ 0.78
PSPC1-203ENST00000471658 RNF25Q96BH1 459 aaPredicted RBP19.91■□□□□ 0.78
PSPC1-203ENST00000471658 MYADMQ96S97 322 aa19.91■□□□□ 0.78
PSPC1-203ENST00000471658 DHX35Q9H5Z1 703 aaKnown RBP19.91■□□□□ 0.78
PSPC1-203ENST00000471658 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.91■□□□□ 0.78
PSPC1-203ENST00000471658 AP4E1Q9UPM8 1137 aa19.91■□□□□ 0.78
PSPC1-203ENST00000471658 SPTBN5Q9NRC6 3674 aaKnown RBP19.91■□□□□ 0.78
PSPC1-203ENST00000471658 GOLGA6L7A0A1B0GV03 622 aa19.91■□□□□ 0.78
PSPC1-203ENST00000471658 FAM72CH0Y354 149 aa19.91■□□□□ 0.78
PSPC1-203ENST00000471658 LEFTY2O00292 366 aa19.91■□□□□ 0.78
PSPC1-203ENST00000471658 KCNK3O14649 394 aa19.91■□□□□ 0.78
PSPC1-203ENST00000471658 GREM1O60565 184 aa19.91■□□□□ 0.78
PSPC1-203ENST00000471658 SRGAP2O75044 1071 aa19.91■□□□□ 0.78
PSPC1-203ENST00000471658 PAGE1O75459 146 aa19.91■□□□□ 0.78
PSPC1-203ENST00000471658 KRT7P08729 469 aa19.91■□□□□ 0.78
PSPC1-203ENST00000471658 PFKLP17858 780 aa19.91■□□□□ 0.78
PSPC1-203ENST00000471658 MTHFRP42898 656 aa19.91■□□□□ 0.78
PSPC1-203ENST00000471658 FAM72AQ5TYM5 149 aa19.91■□□□□ 0.78
PSPC1-203ENST00000471658 FAM72DQ6L9T8 149 aa19.91■□□□□ 0.78
PSPC1-203ENST00000471658 POLNQ7Z5Q5 900 aa19.91■□□□□ 0.78
PSPC1-203ENST00000471658 FAM72BQ86X60 149 aa19.91■□□□□ 0.78
PSPC1-203ENST00000471658 UBL4BQ8N7F7 174 aa19.91■□□□□ 0.78
PSPC1-203ENST00000471658 SH3RF2Q8TEC5 729 aa19.91■□□□□ 0.78
PSPC1-203ENST00000471658 TEKT4Q8WW24 435 aa19.91■□□□□ 0.78
PSPC1-203ENST00000471658 KCTD15Q96SI1 283 aaPredicted RBP19.91■□□□□ 0.78
PSPC1-203ENST00000471658 SIK2Q9H0K1 926 aa19.91■□□□□ 0.78
PSPC1-203ENST00000471658 TDP1Q9NUW8 608 aa19.91■□□□□ 0.78
PSPC1-203ENST00000471658 CFAP97Q9P2B7 532 aa19.91■□□□□ 0.78
PSPC1-203ENST00000471658 ARHGAP26Q9UNA1 814 aa19.91■□□□□ 0.78
PSPC1-203ENST00000471658 C5orf42Q9H799 3197 aa19.9■□□□□ 0.78
PSPC1-203ENST00000471658 BRWD1Q9NSI6 2320 aa19.9■□□□□ 0.78
PSPC1-203ENST00000471658 APOEP02649 317 aa19.9■□□□□ 0.78
PSPC1-203ENST00000471658 KRT1P04264 644 aa19.9■□□□□ 0.78
PSPC1-203ENST00000471658 PYGMP11217 842 aa19.9■□□□□ 0.78
PSPC1-203ENST00000471658 CORO1AP31146 461 aaKnown RBP19.9■□□□□ 0.78
PSPC1-203ENST00000471658 L1CAMP32004 1257 aa19.9■□□□□ 0.78
PSPC1-203ENST00000471658 ARSEP51690 589 aa19.9■□□□□ 0.78
PSPC1-203ENST00000471658 RWDD2BP57060 319 aa19.9■□□□□ 0.78
PSPC1-203ENST00000471658 ARL13BQ3SXY8 428 aa19.9■□□□□ 0.78
PSPC1-203ENST00000471658 PIK3R6Q5UE93 754 aa19.9■□□□□ 0.78
PSPC1-203ENST00000471658 PAPD7Q5XG87 772 aaKnown RBP19.9■□□□□ 0.78
PSPC1-203ENST00000471658 DENND1CQ8IV53 801 aa19.9■□□□□ 0.78
PSPC1-203ENST00000471658 KATNAL2Q8IYT4 538 aa19.9■□□□□ 0.78
PSPC1-203ENST00000471658 SUSD6Q92537 303 aa19.9■□□□□ 0.78
PSPC1-203ENST00000471658 PLD4Q96BZ4 506 aa19.9■□□□□ 0.78
PSPC1-203ENST00000471658 SNX12Q9UMY4 172 aa19.9■□□□□ 0.78
PSPC1-203ENST00000471658 SOBPA7XYQ1 873 aa19.89■□□□□ 0.77
PSPC1-203ENST00000471658 SLC2A3P11169 496 aa19.89■□□□□ 0.77
PSPC1-203ENST00000471658 KDELR1P24390 212 aa19.89■□□□□ 0.77
PSPC1-203ENST00000471658 VIPR2P41587 438 aa19.89■□□□□ 0.77
PSPC1-203ENST00000471658 CDH6P55285 790 aa19.89■□□□□ 0.77
PSPC1-203ENST00000471658 SCAPQ12770 1279 aa19.89■□□□□ 0.77
PSPC1-203ENST00000471658 EFHC2Q5JST6 749 aa19.89■□□□□ 0.77
PSPC1-203ENST00000471658 FAM78AQ5JUQ0 283 aa19.89■□□□□ 0.77
PSPC1-203ENST00000471658 NUGGCQ68CJ6 796 aa19.89■□□□□ 0.77
PSPC1-203ENST00000471658 NADSYN1Q6IA69 706 aa19.89■□□□□ 0.77
PSPC1-203ENST00000471658 MFSD7Q6UXD7 560 aa19.89■□□□□ 0.77
PSPC1-203ENST00000471658 C14orf80Q86SX3 495 aa19.89■□□□□ 0.77
PSPC1-203ENST00000471658 UNC45BQ8IWX7 931 aa19.89■□□□□ 0.77
PSPC1-203ENST00000471658 ATP6V0D2Q8N8Y2 350 aa19.89■□□□□ 0.77
PSPC1-203ENST00000471658 KCTD6Q8NC69 237 aa19.89■□□□□ 0.77
PSPC1-203ENST00000471658 COG1Q8WTW3 980 aa19.89■□□□□ 0.77
PSPC1-203ENST00000471658 RSPRY1Q96DX4 576 aa19.89■□□□□ 0.77
PSPC1-203ENST00000471658 LRRC3BQ96PB8 259 aa19.89■□□□□ 0.77
PSPC1-203ENST00000471658 PCDH18Q9HCL0 1135 aa19.89■□□□□ 0.77
PSPC1-203ENST00000471658 DDX56Q9NY93 547 aaKnown RBP19.89■□□□□ 0.77
PSPC1-203ENST00000471658 AGO1Q9UL18 857 aaKnown RBP19.89■□□□□ 0.77
PSPC1-203ENST00000471658 CDH7Q9ULB5 785 aa19.89■□□□□ 0.77
PSPC1-203ENST00000471658 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.89■□□□□ 0.77
PSPC1-203ENST00000471658 HS3ST4Q9Y661 456 aa19.89■□□□□ 0.77
PSPC1-203ENST00000471658 LRRD1A4D1F6 860 aa19.88■□□□□ 0.77
PSPC1-203ENST00000471658 C3orf70A6NLC5 250 aaPredicted RBP19.88■□□□□ 0.77
PSPC1-203ENST00000471658 KIF2AO00139 706 aaPredicted RBP19.88■□□□□ 0.77
PSPC1-203ENST00000471658 ZNF185O15231 689 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms