RNA–Protein interactions for RNA: ENST00000471595.5

PCCB-210, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCCB, Length 6,090 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-210ENST00000471595 WNT10BO00744 389 aa13.29□□□□□ -0.28
PCCB-210ENST00000471595 TPST1O60507 370 aa13.29□□□□□ -0.28
PCCB-210ENST00000471595 ZNF23P17027 643 aa13.29□□□□□ -0.28
PCCB-210ENST00000471595 AMPD1P23109 780 aa13.29□□□□□ -0.28
PCCB-210ENST00000471595 SOX11P35716 441 aa13.29□□□□□ -0.28
PCCB-210ENST00000471595 ZNF157P51786 506 aaPredicted RBP13.29□□□□□ -0.28
PCCB-210ENST00000471595 KPNA1P52294 538 aaPredicted RBP13.29□□□□□ -0.28
PCCB-210ENST00000471595 ADIGQ0VDE8 80 aa13.29□□□□□ -0.28
PCCB-210ENST00000471595 KCNT2Q6UVM3 1135 aa13.29□□□□□ -0.28
PCCB-210ENST00000471595 LRP10Q7Z4F1 713 aa13.29□□□□□ -0.28
PCCB-210ENST00000471595 POLNQ7Z5Q5 900 aa13.29□□□□□ -0.28
PCCB-210ENST00000471595 CCDC60Q8IWA6 550 aaPredicted RBP13.29□□□□□ -0.28
PCCB-210ENST00000471595 IQCKQ8N0W5 287 aa13.29□□□□□ -0.28
PCCB-210ENST00000471595 WTIPA6NIX2 430 aaPredicted RBP13.29□□□□□ -0.28
PCCB-210ENST00000471595 TGFB1I1O43294 461 aa13.29□□□□□ -0.28
PCCB-210ENST00000471595 EGFRP00533 1210 aa13.29□□□□□ -0.28
PCCB-210ENST00000471595 CCR1P32246 355 aa13.29□□□□□ -0.28
PCCB-210ENST00000471595 DDX43Q9NXZ2 648 aaKnown RBP13.29□□□□□ -0.28
PCCB-210ENST00000471595 CXCL11O14625 94 aa13.29□□□□□ -0.28
PCCB-210ENST00000471595 KPNA6O60684 536 aa13.29□□□□□ -0.28
PCCB-210ENST00000471595 CLK1P49759 484 aaKnown RBP13.29□□□□□ -0.28
PCCB-210ENST00000471595 OXCT1P55809 520 aa13.29□□□□□ -0.28
PCCB-210ENST00000471595 PDK4Q16654 411 aa13.29□□□□□ -0.28
PCCB-210ENST00000471595 AGKQ53H12 422 aa13.29□□□□□ -0.28
PCCB-210ENST00000471595 STX19Q8N4C7 294 aa13.29□□□□□ -0.28
PCCB-210ENST00000471595 VTA1Q9NP79 307 aa13.29□□□□□ -0.28
PCCB-210ENST00000471595 V9GYQ6 96 aa13.29□□□□□ -0.28
PCCB-210ENST00000471595 NR5A2O00482 541 aa13.29□□□□□ -0.28
PCCB-210ENST00000471595 GJB6O95452 261 aa13.29□□□□□ -0.28
PCCB-210ENST00000471595 RBL1P28749 1068 aa13.29□□□□□ -0.28
PCCB-210ENST00000471595 THPOP40225 353 aa13.29□□□□□ -0.28
PCCB-210ENST00000471595 CDH8P55286 799 aa13.29□□□□□ -0.28
PCCB-210ENST00000471595 DEFA1P59665 94 aa13.29□□□□□ -0.28
PCCB-210ENST00000471595 DEFA3P59666 94 aa13.29□□□□□ -0.28
PCCB-210ENST00000471595 PARP6Q2NL67 630 aa13.29□□□□□ -0.28
PCCB-210ENST00000471595 FUT11Q495W5 492 aa13.29□□□□□ -0.28
PCCB-210ENST00000471595 L3MBTL3Q96JM7 780 aaPredicted RBP13.29□□□□□ -0.28
PCCB-210ENST00000471595 NEUROG2Q9H2A3 272 aa13.29□□□□□ -0.28
PCCB-210ENST00000471595 SCUBE2Q9NQ36 999 aa13.29□□□□□ -0.28
PCCB-210ENST00000471595 RBM22Q9NW64 420 aaKnown RBP eCLIP13.29□□□□□ -0.28
PCCB-210ENST00000471595 ZSCAN5DPP0CG00 497 aa13.28□□□□□ -0.28
PCCB-210ENST00000471595 ZNF143P52747 638 aaPredicted RBP13.28□□□□□ -0.28
PCCB-210ENST00000471595 ECM1Q16610 540 aa13.28□□□□□ -0.28
PCCB-210ENST00000471595 ZBTB49Q6ZSB9 765 aa13.28□□□□□ -0.28
PCCB-210ENST00000471595 TRIM69Q86WT6 500 aa13.28□□□□□ -0.28
PCCB-210ENST00000471595 RNPEPL1Q9HAU8 725 aa13.28□□□□□ -0.28
PCCB-210ENST00000471595 ERI2A8K979 691 aaKnown RBP13.28□□□□□ -0.28
PCCB-210ENST00000471595 E5RJQ4 531 aa13.28□□□□□ -0.28
PCCB-210ENST00000471595 HOXC6P09630 235 aa13.28□□□□□ -0.28
PCCB-210ENST00000471595 FAM58BPP0C7Q3 252 aa13.28□□□□□ -0.28
PCCB-210ENST00000471595 PPP3CCP48454 512 aa13.28□□□□□ -0.28
PCCB-210ENST00000471595 ARSHQ5FYA8 562 aa13.28□□□□□ -0.28
PCCB-210ENST00000471595 MYO1HQ8N1T3 1032 aa13.28□□□□□ -0.28
PCCB-210ENST00000471595 UBXN6Q9BZV1 441 aa13.28□□□□□ -0.28
PCCB-210ENST00000471595 A1CFQ9NQ94 594 aaKnown RBP13.28□□□□□ -0.28
PCCB-210ENST00000471595 PRG3Q9Y2Y8 225 aaPredicted RBP13.28□□□□□ -0.28
PCCB-210ENST00000471595 ASTN2O75129 1339 aaPredicted RBP13.28□□□□□ -0.28
PCCB-210ENST00000471595 ASMTLO95671 621 aa13.28□□□□□ -0.28
PCCB-210ENST00000471595 CDH18Q13634 790 aa13.28□□□□□ -0.28
PCCB-210ENST00000471595 NFE2Q16621 373 aaPredicted RBP13.28□□□□□ -0.28
PCCB-210ENST00000471595 UNC93AQ86WB7 457 aa13.28□□□□□ -0.28
PCCB-210ENST00000471595 SCUBE3Q8IX30 993 aa13.28□□□□□ -0.28
PCCB-210ENST00000471595 GDPD5Q8WTR4 605 aa13.28□□□□□ -0.28
PCCB-210ENST00000471595 PURBQ96QR8 312 aaKnown RBP13.28□□□□□ -0.28
PCCB-210ENST00000471595 OSMRQ99650 979 aa13.28□□□□□ -0.28
PCCB-210ENST00000471595 TBC1D12O60347 775 aa13.28□□□□□ -0.28
PCCB-210ENST00000471595 RUNX1T1Q06455 604 aa13.28□□□□□ -0.28
PCCB-210ENST00000471595 CENPLQ8N0S6 344 aaPredicted RBP13.28□□□□□ -0.28
PCCB-210ENST00000471595 PPP1R10Q96QC0 940 aaKnown RBP13.28□□□□□ -0.28
PCCB-210ENST00000471595 NT5MQ9NPB1 228 aa13.28□□□□□ -0.28
PCCB-210ENST00000471595 NMRK1Q9NWW6 199 aa13.28□□□□□ -0.28
PCCB-210ENST00000471595 GPRC5DQ9NZD1 345 aa13.28□□□□□ -0.28
PCCB-210ENST00000471595 PLA2G6O60733 806 aa13.27□□□□□ -0.28
PCCB-210ENST00000471595 LYPLA2O95372 231 aa13.27□□□□□ -0.28
PCCB-210ENST00000471595 GLRA2P23416 452 aa13.27□□□□□ -0.28
PCCB-210ENST00000471595 MARCKSL1P49006 195 aa13.27□□□□□ -0.28
PCCB-210ENST00000471595 CSTF3Q12996 717 aaKnown RBP13.27□□□□□ -0.28
PCCB-210ENST00000471595 PREPLQ4J6C6 727 aaPredicted RBP13.27□□□□□ -0.28
PCCB-210ENST00000471595 DDX53Q86TM3 631 aaKnown RBP13.27□□□□□ -0.28
PCCB-210ENST00000471595 MMP13P45452 471 aa13.27□□□□□ -0.28
PCCB-210ENST00000471595 DDR1Q08345 913 aa13.27□□□□□ -0.28
PCCB-210ENST00000471595 OASLQ15646 514 aaKnown RBP13.27□□□□□ -0.28
PCCB-210ENST00000471595 HIST2H2ACQ16777 129 aaPredicted RBP13.27□□□□□ -0.28
PCCB-210ENST00000471595 MARC1Q5VT66 337 aa13.27□□□□□ -0.28
PCCB-210ENST00000471595 HGSNATQ68CP4 663 aa13.27□□□□□ -0.28
PCCB-210ENST00000471595 HIST2H2AA3Q6FI13 130 aa13.27□□□□□ -0.28
PCCB-210ENST00000471595 DEFB106AQ8N104 65 aa13.27□□□□□ -0.28
PCCB-210ENST00000471595 SMARCD1Q96GM5 515 aa13.27□□□□□ -0.28
PCCB-210ENST00000471595 CATSPER2Q96P56 530 aa13.27□□□□□ -0.28
PCCB-210ENST00000471595 RPL26L1Q9UNX3 145 aaKnown RBP13.27□□□□□ -0.28
PCCB-210ENST00000471595 ZNF286BP0CG31 522 aa13.27□□□□□ -0.29
PCCB-210ENST00000471595 SNHG28P0DPA3 235 aa13.27□□□□□ -0.29
PCCB-210ENST00000471595 RENBPP51606 427 aa13.27□□□□□ -0.29
PCCB-210ENST00000471595 NOMO3P69849 1222 aa13.27□□□□□ -0.29
PCCB-210ENST00000471595 MMRN1Q13201 1228 aa13.27□□□□□ -0.29
PCCB-210ENST00000471595 POLD3Q15054 466 aaPredicted RBP13.27□□□□□ -0.29
PCCB-210ENST00000471595 ADGRE3Q9BY15 652 aa13.27□□□□□ -0.29
PCCB-210ENST00000471595 PHACTR1Q9C0D0 580 aa13.27□□□□□ -0.29
PCCB-210ENST00000471595 VAV3Q9UKW4 847 aa13.27□□□□□ -0.29
PCCB-210ENST00000471595 PAIP2BQ9ULR5 123 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms