RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 DUSP22Q9NRW4 184 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 DLL3Q9NYJ7 618 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 LRIT1Q9P2V4 623 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 RAB21Q9UL25 225 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 TRPC5Q9UL62 973 aaPredicted RBP4.56□□□□□ -1.68
PRPF3-204ENST00000470824 SLC12A4Q9UP95 1085 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 PCDHB2Q9Y5E7 798 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 PCDHA10Q9Y5I2 948 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 MBD4O95243 580 aa4.55□□□□□ -1.68
PRPF3-204ENST00000470824 ESRRBO95718 433 aa4.55□□□□□ -1.68
PRPF3-204ENST00000470824 CYP3A4P08684 503 aa4.55□□□□□ -1.68
PRPF3-204ENST00000470824 CYP21A2P08686 494 aa4.55□□□□□ -1.68
PRPF3-204ENST00000470824 MATN1P21941 496 aa4.55□□□□□ -1.68
PRPF3-204ENST00000470824 TGM1P22735 817 aa4.55□□□□□ -1.68
PRPF3-204ENST00000470824 PCSK6P29122 969 aa4.55□□□□□ -1.68
PRPF3-204ENST00000470824 DIO1P49895 249 aa4.55□□□□□ -1.68
PRPF3-204ENST00000470824 TUBP50607 506 aa4.55□□□□□ -1.68
PRPF3-204ENST00000470824 EEFSECP57772 596 aaKnown RBP4.55□□□□□ -1.68
PRPF3-204ENST00000470824 MPP1Q00013 466 aa4.55□□□□□ -1.68
PRPF3-204ENST00000470824 TLE3Q04726 772 aa4.55□□□□□ -1.68
PRPF3-204ENST00000470824 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.55□□□□□ -1.68
PRPF3-204ENST00000470824 MPP3Q13368 585 aa4.55□□□□□ -1.68
PRPF3-204ENST00000470824 SIM2Q14190 667 aaPredicted RBP4.55□□□□□ -1.68
PRPF3-204ENST00000470824 TMEM63BQ5T3F8 832 aa4.55□□□□□ -1.68
PRPF3-204ENST00000470824 L1TD1Q5T7N2 865 aaKnown RBP4.55□□□□□ -1.68
PRPF3-204ENST00000470824 FNDC7Q5VTL7 733 aa4.55□□□□□ -1.68
PRPF3-204ENST00000470824 ATG16L1Q676U5 607 aa4.55□□□□□ -1.68
PRPF3-204ENST00000470824 FAAH2Q6GMR7 532 aa4.55□□□□□ -1.68
PRPF3-204ENST00000470824 WDR93Q6P2C0 686 aa4.55□□□□□ -1.68
PRPF3-204ENST00000470824 C16orf89Q6UX73 402 aa4.55□□□□□ -1.68
PRPF3-204ENST00000470824 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.55□□□□□ -1.68
PRPF3-204ENST00000470824 C12orf76Q8N812 135 aaPredicted RBP4.55□□□□□ -1.68
PRPF3-204ENST00000470824 ANKRD44Q8N8A2 993 aa4.55□□□□□ -1.68
PRPF3-204ENST00000470824 SLC2A12Q8TD20 617 aa4.55□□□□□ -1.68
PRPF3-204ENST00000470824 GLMPQ8WWB7 406 aa4.55□□□□□ -1.68
PRPF3-204ENST00000470824 PRR11Q96HE9 360 aaPredicted RBP4.55□□□□□ -1.68
PRPF3-204ENST00000470824 LENG8Q96PV6 779 aaPredicted RBP4.55□□□□□ -1.68
PRPF3-204ENST00000470824 SENP7Q9BQF6 1050 aa4.55□□□□□ -1.68
PRPF3-204ENST00000470824 FSD1LQ9BXM9 530 aa4.55□□□□□ -1.68
PRPF3-204ENST00000470824 KRTAP9-3Q9BYQ3 159 aa4.55□□□□□ -1.68
PRPF3-204ENST00000470824 GPR63Q9BZJ6 419 aa4.55□□□□□ -1.68
PRPF3-204ENST00000470824 USP29Q9HBJ7 922 aa4.55□□□□□ -1.68
PRPF3-204ENST00000470824 ADAMTS5Q9UNA0 930 aa4.55□□□□□ -1.68
PRPF3-204ENST00000470824 AGAP5A6NIR3 686 aa4.54□□□□□ -1.68
PRPF3-204ENST00000470824 C1QTNF3-AMACRE9PGA6 284 aa4.54□□□□□ -1.68
PRPF3-204ENST00000470824 SUV39H1O43463 412 aa4.54□□□□□ -1.68
PRPF3-204ENST00000470824 RHOBTB3O94955 611 aa4.54□□□□□ -1.68
PRPF3-204ENST00000470824 HEXIM1O94992 359 aaKnown RBP4.54□□□□□ -1.68
PRPF3-204ENST00000470824 C1RP00736 705 aa4.54□□□□□ -1.68
PRPF3-204ENST00000470824 EBLN1P0CF75 366 aa4.54□□□□□ -1.68
PRPF3-204ENST00000470824 CPA1P15085 419 aa4.54□□□□□ -1.68
PRPF3-204ENST00000470824 MAKP20794 623 aa4.54□□□□□ -1.68
PRPF3-204ENST00000470824 DUSP1P28562 367 aa4.54□□□□□ -1.68
PRPF3-204ENST00000470824 MPLP40238 635 aa4.54□□□□□ -1.68
PRPF3-204ENST00000470824 LIFRP42702 1097 aa4.54□□□□□ -1.68
PRPF3-204ENST00000470824 JAK3P52333 1124 aa4.54□□□□□ -1.68
PRPF3-204ENST00000470824 RCAN1P53805 252 aa4.54□□□□□ -1.68
PRPF3-204ENST00000470824 FAM3BP58499 235 aaPredicted RBP4.54□□□□□ -1.68
PRPF3-204ENST00000470824 PSG6Q00889 435 aa4.54□□□□□ -1.68
PRPF3-204ENST00000470824 LMAN2Q12907 356 aa4.54□□□□□ -1.68
PRPF3-204ENST00000470824 AARS2Q5JTZ9 985 aaKnown RBP4.54□□□□□ -1.68
PRPF3-204ENST00000470824 PCID2Q5JVF3 399 aa4.54□□□□□ -1.68
PRPF3-204ENST00000470824 ZNF484Q5JVG2 852 aa4.54□□□□□ -1.68
PRPF3-204ENST00000470824 SYNE3Q6ZMZ3 975 aa4.54□□□□□ -1.68
PRPF3-204ENST00000470824 PEG10Q86TG7 708 aaKnown RBP4.54□□□□□ -1.68
PRPF3-204ENST00000470824 HEATR4Q86WZ0 1026 aa4.54□□□□□ -1.68
PRPF3-204ENST00000470824 TSPYL6Q8N831 410 aa4.54□□□□□ -1.68
PRPF3-204ENST00000470824 PTGR2Q8N8N7 351 aaPredicted RBP4.54□□□□□ -1.68
PRPF3-204ENST00000470824 PCYOX1LQ8NBM8 494 aa4.54□□□□□ -1.68
PRPF3-204ENST00000470824 ACTRT2Q8TDY3 377 aa4.54□□□□□ -1.68
PRPF3-204ENST00000470824 LINC00476Q8WZB0 136 aa4.54□□□□□ -1.68
PRPF3-204ENST00000470824 RBM17Q96I25 401 aaKnown RBP4.54□□□□□ -1.68
PRPF3-204ENST00000470824 SNX18Q96RF0 628 aa4.54□□□□□ -1.68
PRPF3-204ENST00000470824 CDCP1Q9H5V8 836 aa4.54□□□□□ -1.68
PRPF3-204ENST00000470824 PLEKHA2Q9HB19 425 aa4.54□□□□□ -1.68
PRPF3-204ENST00000470824 SYBUQ9NX95 663 aa4.54□□□□□ -1.68
PRPF3-204ENST00000470824 VPS4AQ9UN37 437 aa4.54□□□□□ -1.68
PRPF3-204ENST00000470824 VWA3AA6NCI4 1184 aa4.53□□□□□ -1.68
PRPF3-204ENST00000470824 C3orf70A6NLC5 250 aaPredicted RBP4.53□□□□□ -1.68
PRPF3-204ENST00000470824 LINC00473A8K010 186 aa4.53□□□□□ -1.68
PRPF3-204ENST00000470824 H0YIZ8 118 aa4.53□□□□□ -1.68
PRPF3-204ENST00000470824 IFIT1P09914 478 aaKnown RBP4.53□□□□□ -1.68
PRPF3-204ENST00000470824 TNNT1P13805 278 aa4.53□□□□□ -1.68
PRPF3-204ENST00000470824 CHN1P15882 459 aa4.53□□□□□ -1.68
PRPF3-204ENST00000470824 CXCR5P32302 372 aa4.53□□□□□ -1.68
PRPF3-204ENST00000470824 GALNSP34059 522 aa4.53□□□□□ -1.68
PRPF3-204ENST00000470824 CASP2P42575 452 aa4.53□□□□□ -1.68
PRPF3-204ENST00000470824 FOXL2P58012 376 aa4.53□□□□□ -1.68
PRPF3-204ENST00000470824 GPC5P78333 572 aa4.53□□□□□ -1.68
PRPF3-204ENST00000470824 LRRC24Q50LG9 513 aa4.53□□□□□ -1.68
PRPF3-204ENST00000470824 WDR45BQ5MNZ6 344 aa4.53□□□□□ -1.68
PRPF3-204ENST00000470824 ANO7Q6IWH7 933 aa4.53□□□□□ -1.68
PRPF3-204ENST00000470824 KIRREL2Q6UWL6 708 aa4.53□□□□□ -1.68
PRPF3-204ENST00000470824 SPRED1Q7Z699 444 aa4.53□□□□□ -1.68
PRPF3-204ENST00000470824 TCP11L2Q8N4U5 519 aa4.53□□□□□ -1.68
PRPF3-204ENST00000470824 SRFBP1Q8NEF9 429 aaKnown RBP4.53□□□□□ -1.68
PRPF3-204ENST00000470824 SLC9A6Q92581 669 aa4.53□□□□□ -1.68
PRPF3-204ENST00000470824 EDC3Q96F86 508 aaKnown RBP4.53□□□□□ -1.68
PRPF3-204ENST00000470824 TRMT61AQ96FX7 289 aaKnown RBP4.53□□□□□ -1.68
PRPF3-204ENST00000470824 PPP1R10Q96QC0 940 aaKnown RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms