RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 Q4G0T1 1027 aa4.52□□□□□ -1.69
BRCA2-202ENST00000470094 GLE1Q53GS7 698 aaKnown RBP4.52□□□□□ -1.69
BRCA2-202ENST00000470094 RINT1Q6NUQ1 792 aa4.52□□□□□ -1.69
BRCA2-202ENST00000470094 PGBD2Q6P3X8 592 aa4.52□□□□□ -1.69
BRCA2-202ENST00000470094 KYAT3Q6YP21 454 aaKnown RBP4.52□□□□□ -1.69
BRCA2-202ENST00000470094 SKAP1Q86WV1 359 aa4.52□□□□□ -1.69
BRCA2-202ENST00000470094 SLC22A17Q8WUG5 538 aa4.52□□□□□ -1.69
BRCA2-202ENST00000470094 FCRL5Q96RD9 977 aa4.52□□□□□ -1.69
BRCA2-202ENST00000470094 PAAF1Q9BRP4 392 aa4.52□□□□□ -1.69
BRCA2-202ENST00000470094 TRIM2Q9C040 744 aa4.52□□□□□ -1.69
BRCA2-202ENST00000470094 VPS16Q9H269 839 aa4.52□□□□□ -1.69
BRCA2-202ENST00000470094 TUBA8Q9NY65 449 aaPredicted RBP4.52□□□□□ -1.69
BRCA2-202ENST00000470094 A0A087WV62 115 aa4.51□□□□□ -1.69
BRCA2-202ENST00000470094 ABHD14A-ACY1A0A1B0GW23 586 aa4.51□□□□□ -1.69
BRCA2-202ENST00000470094 GXYLT2A0PJZ3 443 aa4.51□□□□□ -1.69
BRCA2-202ENST00000470094 AQP12BA6NM10 295 aa4.51□□□□□ -1.69
BRCA2-202ENST00000470094 C16orf96A6NNT2 1141 aa4.51□□□□□ -1.69
BRCA2-202ENST00000470094 M0QZQ0 153 aa4.51□□□□□ -1.69
BRCA2-202ENST00000470094 TP73O15350 636 aa4.51□□□□□ -1.69
BRCA2-202ENST00000470094 ASNA1O43681 348 aa4.51□□□□□ -1.69
BRCA2-202ENST00000470094 CER1O95813 267 aa4.51□□□□□ -1.69
BRCA2-202ENST00000470094 PLAUP00749 431 aa4.51□□□□□ -1.69
BRCA2-202ENST00000470094 CD63P08962 238 aa4.51□□□□□ -1.69
BRCA2-202ENST00000470094 AKT1P31749 480 aa4.51□□□□□ -1.69
BRCA2-202ENST00000470094 IL6STP40189 918 aaPredicted RBP4.51□□□□□ -1.69
BRCA2-202ENST00000470094 AGTR2P50052 363 aa4.51□□□□□ -1.69
BRCA2-202ENST00000470094 PLCD1P51178 756 aa4.51□□□□□ -1.69
BRCA2-202ENST00000470094 CFHR1Q03591 330 aa4.51□□□□□ -1.69
BRCA2-202ENST00000470094 ZNF91Q05481 1191 aa4.51□□□□□ -1.69
BRCA2-202ENST00000470094 GAB1Q13480 694 aa4.51□□□□□ -1.69
BRCA2-202ENST00000470094 SPARCL1Q14515 664 aa4.51□□□□□ -1.69
BRCA2-202ENST00000470094 TRIM71Q2Q1W2 868 aaKnown RBP4.51□□□□□ -1.69
BRCA2-202ENST00000470094 SLC9C1Q4G0N8 1177 aa4.51□□□□□ -1.69
BRCA2-202ENST00000470094 PXDC1Q5TGL8 231 aa4.51□□□□□ -1.69
BRCA2-202ENST00000470094 GGT6Q6P531 493 aa4.51□□□□□ -1.69
BRCA2-202ENST00000470094 C1orf228Q6PIY5 440 aa4.51□□□□□ -1.69
BRCA2-202ENST00000470094 C16orf89Q6UX73 402 aa4.51□□□□□ -1.69
BRCA2-202ENST00000470094 C1QL2Q7Z5L3 287 aa4.51□□□□□ -1.69
BRCA2-202ENST00000470094 UEVLDQ8IX04 471 aa4.51□□□□□ -1.69
BRCA2-202ENST00000470094 NRSN1Q8IZ57 195 aa4.51□□□□□ -1.69
BRCA2-202ENST00000470094 SAMD3Q8N6K7 520 aa4.51□□□□□ -1.69
BRCA2-202ENST00000470094 FAM71BQ8TC56 605 aa4.51□□□□□ -1.69
BRCA2-202ENST00000470094 PIGOQ8TEQ8 1089 aa4.51□□□□□ -1.69
BRCA2-202ENST00000470094 PIGKQ92643 395 aa4.51□□□□□ -1.69
BRCA2-202ENST00000470094 SIGLEC11Q96RL6 698 aa4.51□□□□□ -1.69
BRCA2-202ENST00000470094 MPHOSPH6Q99547 160 aaKnown RBP4.51□□□□□ -1.69
BRCA2-202ENST00000470094 TM2D2Q9BX73 214 aa4.51□□□□□ -1.69
BRCA2-202ENST00000470094 WDR12Q9GZL7 423 aaKnown RBP4.51□□□□□ -1.69
BRCA2-202ENST00000470094 KCNK9Q9NPC2 374 aa4.51□□□□□ -1.69
BRCA2-202ENST00000470094 TRNAU1APQ9NX07 287 aaKnown RBP4.51□□□□□ -1.69
BRCA2-202ENST00000470094 NFU1Q9UMS0 254 aa4.51□□□□□ -1.69
BRCA2-202ENST00000470094 PCDHB7Q9Y5E2 793 aa4.51□□□□□ -1.69
BRCA2-202ENST00000470094 TNFRSF18Q9Y5U5 241 aa4.51□□□□□ -1.69
BRCA2-202ENST00000470094 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.5□□□□□ -1.69
BRCA2-202ENST00000470094 SKAP2O75563 359 aaPredicted RBP4.5□□□□□ -1.69
BRCA2-202ENST00000470094 TOP3BO95985 862 aaKnown RBP4.5□□□□□ -1.69
BRCA2-202ENST00000470094 KLRK1P26718 216 aa4.5□□□□□ -1.69
BRCA2-202ENST00000470094 THBS4P35443 961 aa4.5□□□□□ -1.69
BRCA2-202ENST00000470094 RPS13P62277 151 aaKnown RBP4.5□□□□□ -1.69
BRCA2-202ENST00000470094 ID2Q02363 134 aa4.5□□□□□ -1.69
BRCA2-202ENST00000470094 MTA1Q13330 715 aa4.5□□□□□ -1.69
BRCA2-202ENST00000470094 STIM1Q13586 685 aa4.5□□□□□ -1.69
BRCA2-202ENST00000470094 ANKRD40Q6AI12 368 aa4.5□□□□□ -1.69
BRCA2-202ENST00000470094 ZNF425Q6IV72 752 aa4.5□□□□□ -1.69
BRCA2-202ENST00000470094 SHC4Q6S5L8 630 aa4.5□□□□□ -1.69
BRCA2-202ENST00000470094 RBM44Q6ZP01 1051 aaKnown RBP4.5□□□□□ -1.69
BRCA2-202ENST00000470094 TFAP2DQ7Z6R9 452 aa4.5□□□□□ -1.69
BRCA2-202ENST00000470094 TRABD2AQ86V40 505 aa4.5□□□□□ -1.69
BRCA2-202ENST00000470094 MYLK4Q86YV6 388 aaPredicted RBP4.5□□□□□ -1.69
BRCA2-202ENST00000470094 ASB12Q8WXK4 309 aa4.5□□□□□ -1.69
BRCA2-202ENST00000470094 NPIPB3Q92617 1050 aa4.5□□□□□ -1.69
BRCA2-202ENST00000470094 CELF1Q92879 486 aaKnown RBP4.5□□□□□ -1.69
BRCA2-202ENST00000470094 P2RY11Q96G91 374 aa4.5□□□□□ -1.69
BRCA2-202ENST00000470094 ZNF845Q96IR2 970 aaPredicted RBP4.5□□□□□ -1.69
BRCA2-202ENST00000470094 ELOVL1Q9BW60 279 aa4.5□□□□□ -1.69
BRCA2-202ENST00000470094 TP63Q9H3D4 680 aaPredicted RBP4.5□□□□□ -1.69
BRCA2-202ENST00000470094 AGO4Q9HCK5 861 aaKnown RBP4.5□□□□□ -1.69
BRCA2-202ENST00000470094 OBP2BQ9NPH6 170 aa4.5□□□□□ -1.69
BRCA2-202ENST00000470094 PLCB1Q9NQ66 1216 aa4.5□□□□□ -1.69
BRCA2-202ENST00000470094 DAAM1Q9Y4D1 1078 aa4.5□□□□□ -1.69
BRCA2-202ENST00000470094 LGALS16A8MUM7 142 aa4.49□□□□□ -1.69
BRCA2-202ENST00000470094 ADAM10O14672 748 aa4.49□□□□□ -1.69
BRCA2-202ENST00000470094 DNPH1O43598 174 aa4.49□□□□□ -1.69
BRCA2-202ENST00000470094 PEX14O75381 377 aa4.49□□□□□ -1.69
BRCA2-202ENST00000470094 RPP40O75818 363 aaKnown RBP4.49□□□□□ -1.69
BRCA2-202ENST00000470094 FGBP02675 491 aa4.49□□□□□ -1.69
BRCA2-202ENST00000470094 ENO1P06733 434 aaKnown RBP4.49□□□□□ -1.69
BRCA2-202ENST00000470094 RPS6KB1P23443 525 aa4.49□□□□□ -1.69
BRCA2-202ENST00000470094 PTGER1P34995 402 aa4.49□□□□□ -1.69
BRCA2-202ENST00000470094 IDUAP35475 653 aa4.49□□□□□ -1.69
BRCA2-202ENST00000470094 STAT6P42226 847 aa4.49□□□□□ -1.69
BRCA2-202ENST00000470094 CPA2P48052 419 aa4.49□□□□□ -1.69
BRCA2-202ENST00000470094 SLC12A2P55011 1212 aa4.49□□□□□ -1.69
BRCA2-202ENST00000470094 ICA1Q05084 483 aa4.49□□□□□ -1.69
BRCA2-202ENST00000470094 PTK2BQ14289 1009 aa4.49□□□□□ -1.69
BRCA2-202ENST00000470094 RABEP1Q15276 862 aa4.49□□□□□ -1.69
BRCA2-202ENST00000470094 WDR93Q6P2C0 686 aa4.49□□□□□ -1.69
BRCA2-202ENST00000470094 UBE2Q1Q7Z7E8 422 aa4.49□□□□□ -1.69
BRCA2-202ENST00000470094 RFX6Q8HWS3 928 aa4.49□□□□□ -1.69
BRCA2-202ENST00000470094 LAS2Q8IYD9 372 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms