RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 PHTF2Q8N3S3 785 aa20.81■□□□□ 0.92
NPHP4-206ENST00000468253 ADAM32Q8TC27 787 aa20.81■□□□□ 0.92
NPHP4-206ENST00000468253 BTN2A3PQ96KV6 586 aa20.81■□□□□ 0.92
NPHP4-206ENST00000468253 SEPT11Q9NVA2 429 aaKnown RBP20.81■□□□□ 0.92
NPHP4-206ENST00000468253 SPATA6Q9NWH7 488 aaPredicted RBP20.81■□□□□ 0.92
NPHP4-206ENST00000468253 DDIT4Q9NX09 232 aa20.81■□□□□ 0.92
NPHP4-206ENST00000468253 FBXO4Q9UKT5 387 aa20.81■□□□□ 0.92
NPHP4-206ENST00000468253 MUC6Q6W4X9 2439 aa20.8■□□□□ 0.92
NPHP4-206ENST00000468253 HELZP42694 1942 aaKnown RBP20.8■□□□□ 0.92
NPHP4-206ENST00000468253 NEDD8-MDP1E9PL57 170 aa20.8■□□□□ 0.92
NPHP4-206ENST00000468253 K7EQS6 105 aa20.8■□□□□ 0.92
NPHP4-206ENST00000468253 KAT7O95251 611 aa20.8■□□□□ 0.92
NPHP4-206ENST00000468253 PAPSS2O95340 614 aaPredicted RBP20.8■□□□□ 0.92
NPHP4-206ENST00000468253 APOEP02649 317 aa20.8■□□□□ 0.92
NPHP4-206ENST00000468253 SERPING1P05155 500 aa20.8■□□□□ 0.92
NPHP4-206ENST00000468253 CISD3P0C7P0 127 aa20.8■□□□□ 0.92
NPHP4-206ENST00000468253 GAS6Q14393 721 aa20.8■□□□□ 0.92
NPHP4-206ENST00000468253 C2CD6Q53TS8 623 aa20.8■□□□□ 0.92
NPHP4-206ENST00000468253 ZC3H12AQ5D1E8 599 aaKnown RBP20.8■□□□□ 0.92
NPHP4-206ENST00000468253 ACBD5Q5T8D3 534 aaPredicted RBP20.8■□□□□ 0.92
NPHP4-206ENST00000468253 E4F1Q66K89 784 aaPredicted RBP20.8■□□□□ 0.92
NPHP4-206ENST00000468253 HGSNATQ68CP4 663 aa20.8■□□□□ 0.92
NPHP4-206ENST00000468253 MON1BQ7L1V2 547 aa20.8■□□□□ 0.92
NPHP4-206ENST00000468253 C12orf40Q86WS4 652 aa20.8■□□□□ 0.92
NPHP4-206ENST00000468253 VSTM4Q8IW00 320 aa20.8■□□□□ 0.92
NPHP4-206ENST00000468253 NAT16Q8N8M0 369 aa20.8■□□□□ 0.92
NPHP4-206ENST00000468253 ATP6V0D2Q8N8Y2 350 aa20.8■□□□□ 0.92
NPHP4-206ENST00000468253 OLIG1Q8TAK6 271 aa20.8■□□□□ 0.92
NPHP4-206ENST00000468253 CPLX3Q8WVH0 158 aa20.8■□□□□ 0.92
NPHP4-206ENST00000468253 FAM204AQ9H8W3 233 aa20.8■□□□□ 0.92
NPHP4-206ENST00000468253 ARHGEF4Q9NR80 690 aa20.8■□□□□ 0.92
NPHP4-206ENST00000468253 RBM12Q9NTZ6 932 aaKnown RBP20.8■□□□□ 0.92
NPHP4-206ENST00000468253 SLC27A6Q9Y2P4 619 aa20.8■□□□□ 0.92
NPHP4-206ENST00000468253 STARD13Q9Y3M8 1113 aa20.8■□□□□ 0.92
NPHP4-206ENST00000468253 PAXBP1Q9Y5B6 917 aa20.8■□□□□ 0.92
NPHP4-206ENST00000468253 SIGLEC16A6NMB1 481 aa20.79■□□□□ 0.92
NPHP4-206ENST00000468253 M0QYT0 321 aa20.79■□□□□ 0.92
NPHP4-206ENST00000468253 LAMTOR5O43504 91 aa20.79■□□□□ 0.92
NPHP4-206ENST00000468253 ENDOD1O94919 500 aa20.79■□□□□ 0.92
NPHP4-206ENST00000468253 KRT3P12035 628 aa20.79■□□□□ 0.92
NPHP4-206ENST00000468253 CXCR3P49682 368 aa20.79■□□□□ 0.92
NPHP4-206ENST00000468253 CCR3P51677 355 aa20.79■□□□□ 0.92
NPHP4-206ENST00000468253 PITX1P78337 314 aaPredicted RBP20.79■□□□□ 0.92
NPHP4-206ENST00000468253 MRPS21P82921 87 aaKnown RBP20.79■□□□□ 0.92
NPHP4-206ENST00000468253 TCF15Q12870 199 aa20.79■□□□□ 0.92
NPHP4-206ENST00000468253 ARID5BQ14865 1188 aa20.79■□□□□ 0.92
NPHP4-206ENST00000468253 ANGPT1Q15389 498 aa20.79■□□□□ 0.92
NPHP4-206ENST00000468253 ZNF528Q3MIS6 628 aa20.79■□□□□ 0.92
NPHP4-206ENST00000468253 HSF5Q4G112 596 aaPredicted RBP20.79■□□□□ 0.92
NPHP4-206ENST00000468253 FAM133BQ5BKY9 247 aaKnown RBP20.79■□□□□ 0.92
NPHP4-206ENST00000468253 PIK3R6Q5UE93 754 aa20.79■□□□□ 0.92
NPHP4-206ENST00000468253 RNF43Q68DV7 783 aa20.79■□□□□ 0.92
NPHP4-206ENST00000468253 BNIPLQ7Z465 357 aa20.79■□□□□ 0.92
NPHP4-206ENST00000468253 MCOLN2Q8IZK6 566 aa20.79■□□□□ 0.92
NPHP4-206ENST00000468253 C3orf20Q8ND61 904 aa20.79■□□□□ 0.92
NPHP4-206ENST00000468253 PRSS33Q8NF86 280 aa20.79■□□□□ 0.92
NPHP4-206ENST00000468253 EZH1Q92800 747 aaPredicted RBP20.79■□□□□ 0.92
NPHP4-206ENST00000468253 C11orf70Q9BRQ4 267 aa20.79■□□□□ 0.92
NPHP4-206ENST00000468253 RBSNQ9H1K0 784 aa20.79■□□□□ 0.92
NPHP4-206ENST00000468253 MYO16Q9Y6X6 1858 aa20.79■□□□□ 0.92
NPHP4-206ENST00000468253 TBC1D3BA6NDS4 549 aa20.78■□□□□ 0.92
NPHP4-206ENST00000468253 GOLGA8SH3BPF8 625 aa20.78■□□□□ 0.92
NPHP4-206ENST00000468253 DDX3XO00571 662 aaKnown RBP eCLIP20.78■□□□□ 0.92
NPHP4-206ENST00000468253 SKILP12757 684 aa20.78■□□□□ 0.92
NPHP4-206ENST00000468253 ABCB4P21439 1286 aa20.78■□□□□ 0.92
NPHP4-206ENST00000468253 HOXA6P31267 233 aa20.78■□□□□ 0.92
NPHP4-206ENST00000468253 CASP14P31944 242 aa20.78■□□□□ 0.92
NPHP4-206ENST00000468253 CXCL12P48061 93 aa20.78■□□□□ 0.92
NPHP4-206ENST00000468253 BRMS1LQ5PSV4 323 aa20.78■□□□□ 0.92
NPHP4-206ENST00000468253 GRAMD4Q6IC98 578 aa20.78■□□□□ 0.92
NPHP4-206ENST00000468253 SND1Q7KZF4 910 aaKnown RBP eCLIP20.78■□□□□ 0.92
NPHP4-206ENST00000468253 VPS36Q86VN1 386 aa20.78■□□□□ 0.92
NPHP4-206ENST00000468253 MAML2Q8IZL2 1156 aaPredicted RBP20.78■□□□□ 0.92
NPHP4-206ENST00000468253 ZNF557Q8N988 423 aaPredicted RBP20.78■□□□□ 0.92
NPHP4-206ENST00000468253 OR8K1Q8NGG5 319 aa20.78■□□□□ 0.92
NPHP4-206ENST00000468253 DDI1Q8WTU0 396 aa20.78■□□□□ 0.92
NPHP4-206ENST00000468253 RNF34Q969K3 372 aa20.78■□□□□ 0.92
NPHP4-206ENST00000468253 P2RY11Q96G91 374 aa20.78■□□□□ 0.92
NPHP4-206ENST00000468253 DNAJC17Q9NVM6 304 aaKnown RBP20.78■□□□□ 0.92
NPHP4-206ENST00000468253 TCRBV5S1A1TA0A578 114 aa20.77■□□□□ 0.92
NPHP4-206ENST00000468253 C2CD4BA6NLJ0 364 aa20.77■□□□□ 0.92
NPHP4-206ENST00000468253 RTN2O75298 545 aa20.77■□□□□ 0.92
NPHP4-206ENST00000468253 TPM1P09493 284 aa20.77■□□□□ 0.92
NPHP4-206ENST00000468253 PDGFRAP16234 1089 aa20.77■□□□□ 0.92
NPHP4-206ENST00000468253 FLT3P36888 993 aa20.77■□□□□ 0.92
NPHP4-206ENST00000468253 NADSYN1Q6IA69 706 aa20.77■□□□□ 0.92
NPHP4-206ENST00000468253 USP33Q8TEY7 942 aa20.77■□□□□ 0.92
NPHP4-206ENST00000468253 FAM126AQ9BYI3 521 aaPredicted RBP20.77■□□□□ 0.92
NPHP4-206ENST00000468253 TRIM5Q9C035 493 aa20.77■□□□□ 0.92
NPHP4-206ENST00000468253 WDCPQ9H6R7 721 aa20.77■□□□□ 0.92
NPHP4-206ENST00000468253 PRMT8Q9NR22 394 aaPredicted RBP20.77■□□□□ 0.92
NPHP4-206ENST00000468253 COL4A3Q01955 1670 aa20.77■□□□□ 0.91
NPHP4-206ENST00000468253 CACNA1IQ9P0X4 2223 aa20.76■□□□□ 0.91
NPHP4-206ENST00000468253 TIMM44O43615 452 aa20.76■□□□□ 0.91
NPHP4-206ENST00000468253 RNF40O75150 1001 aa20.76■□□□□ 0.91
NPHP4-206ENST00000468253 FTLP02792 175 aaPredicted RBP20.76■□□□□ 0.91
NPHP4-206ENST00000468253 PTPN9P43378 593 aa20.76■□□□□ 0.91
NPHP4-206ENST00000468253 DGKGP49619 791 aa20.76■□□□□ 0.91
NPHP4-206ENST00000468253 MESP2Q0VG99 397 aa20.76■□□□□ 0.91
NPHP4-206ENST00000468253 NME3Q13232 169 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms