RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 VPS4AQ9UN37 437 aa12.32□□□□□ -0.44
VPS26A-204ENST00000467852 L1RE1Q9UN81 338 aa12.32□□□□□ -0.44
VPS26A-204ENST00000467852 C2CD2Q9Y426 696 aa12.32□□□□□ -0.44
VPS26A-204ENST00000467852 PDZD2O15018 2839 aa12.32□□□□□ -0.44
VPS26A-204ENST00000467852 HIVEP1P15822 2718 aa12.31□□□□□ -0.44
VPS26A-204ENST00000467852 CCDC187A0A096LP49 1063 aa12.31□□□□□ -0.44
VPS26A-204ENST00000467852 PMS2P1A4D2B8 440 aa12.31□□□□□ -0.44
VPS26A-204ENST00000467852 LRRC72A6NJI9 287 aa12.31□□□□□ -0.44
VPS26A-204ENST00000467852 CPLX1O14810 134 aa12.31□□□□□ -0.44
VPS26A-204ENST00000467852 RTN2O75298 545 aa12.31□□□□□ -0.44
VPS26A-204ENST00000467852 ALPPL2P10696 532 aa12.31□□□□□ -0.44
VPS26A-204ENST00000467852 LIPCP11150 499 aa12.31□□□□□ -0.44
VPS26A-204ENST00000467852 MFAP3P55082 362 aa12.31□□□□□ -0.44
VPS26A-204ENST00000467852 RPS14P62263 151 aaKnown RBP12.31□□□□□ -0.44
VPS26A-204ENST00000467852 CYP27A1Q02318 531 aa12.31□□□□□ -0.44
VPS26A-204ENST00000467852 TSGA10IPQ3SY00 556 aa12.31□□□□□ -0.44
VPS26A-204ENST00000467852 RBM44Q6ZP01 1051 aaKnown RBP12.31□□□□□ -0.44
VPS26A-204ENST00000467852 JAMLQ86YT9 394 aa12.31□□□□□ -0.44
VPS26A-204ENST00000467852 DAW1Q8N136 415 aa12.31□□□□□ -0.44
VPS26A-204ENST00000467852 SLC25A45Q8N413 288 aa12.31□□□□□ -0.44
VPS26A-204ENST00000467852 HTR3CQ8WXA8 447 aa12.31□□□□□ -0.44
VPS26A-204ENST00000467852 OVCA2Q8WZ82 227 aa12.31□□□□□ -0.44
VPS26A-204ENST00000467852 MYLPFQ96A32 169 aa12.31□□□□□ -0.44
VPS26A-204ENST00000467852 CIPCQ9C0C6 399 aa12.31□□□□□ -0.44
VPS26A-204ENST00000467852 ASB7Q9H672 318 aa12.31□□□□□ -0.44
VPS26A-204ENST00000467852 CYLDQ9NQC7 956 aa12.31□□□□□ -0.44
VPS26A-204ENST00000467852 PCDHGA7Q9Y5G6 932 aa12.31□□□□□ -0.44
VPS26A-204ENST00000467852 ABCA2Q9BZC7 2435 aa12.31□□□□□ -0.44
VPS26A-204ENST00000467852 MTORP42345 2549 aa12.31□□□□□ -0.44
VPS26A-204ENST00000467852 F8VP50 259 aa12.3□□□□□ -0.44
VPS26A-204ENST00000467852 WNT9AO14904 365 aa12.3□□□□□ -0.44
VPS26A-204ENST00000467852 FFAR2O15552 330 aa12.3□□□□□ -0.44
VPS26A-204ENST00000467852 TIMM44O43615 452 aa12.3□□□□□ -0.44
VPS26A-204ENST00000467852 TGM2P21980 687 aa12.3□□□□□ -0.44
VPS26A-204ENST00000467852 YWHAQP27348 245 aa12.3□□□□□ -0.44
VPS26A-204ENST00000467852 HARS2P49590 506 aaKnown RBP12.3□□□□□ -0.44
VPS26A-204ENST00000467852 LIG4P49917 911 aa12.3□□□□□ -0.44
VPS26A-204ENST00000467852 GALCP54803 685 aa12.3□□□□□ -0.44
VPS26A-204ENST00000467852 GOLGA8FQ08AF8 430 aa12.3□□□□□ -0.44
VPS26A-204ENST00000467852 GOLGA8DPQ0D2H9 430 aa12.3□□□□□ -0.44
VPS26A-204ENST00000467852 SFSWAPQ12872 951 aaKnown RBP12.3□□□□□ -0.44
VPS26A-204ENST00000467852 NAA30Q147X3 362 aaPredicted RBP12.3□□□□□ -0.44
VPS26A-204ENST00000467852 EIF4HQ15056 248 aaKnown RBP12.3□□□□□ -0.44
VPS26A-204ENST00000467852 EARS2Q5JPH6 523 aaKnown RBP12.3□□□□□ -0.44
VPS26A-204ENST00000467852 NCEH1Q6PIU2 408 aa12.3□□□□□ -0.44
VPS26A-204ENST00000467852 USP30Q70CQ3 517 aa12.3□□□□□ -0.44
VPS26A-204ENST00000467852 ANKS1BQ7Z6G8 1248 aa12.3□□□□□ -0.44
VPS26A-204ENST00000467852 SPATS2Q86XZ4 545 aaKnown RBP12.3□□□□□ -0.44
VPS26A-204ENST00000467852 MFSD2AQ8NA29 543 aa12.3□□□□□ -0.44
VPS26A-204ENST00000467852 TMEM161BQ8NDZ6 487 aa12.3□□□□□ -0.44
VPS26A-204ENST00000467852 TPCN2Q8NHX9 752 aa12.3□□□□□ -0.44
VPS26A-204ENST00000467852 IFI44Q8TCB0 444 aa12.3□□□□□ -0.44
VPS26A-204ENST00000467852 GOLGA1Q92805 767 aa12.3□□□□□ -0.44
VPS26A-204ENST00000467852 FBXO32Q969P5 355 aa12.3□□□□□ -0.44
VPS26A-204ENST00000467852 C8orf48Q96LL4 319 aa12.3□□□□□ -0.44
VPS26A-204ENST00000467852 APOLD1Q96LR9 279 aa12.3□□□□□ -0.44
VPS26A-204ENST00000467852 CCSER2Q9H7U1 834 aa12.3□□□□□ -0.44
VPS26A-204ENST00000467852 ZNF71Q9NQZ8 489 aaPredicted RBP12.3□□□□□ -0.44
VPS26A-204ENST00000467852 CHORDC1Q9UHD1 332 aaPredicted RBP12.3□□□□□ -0.44
VPS26A-204ENST00000467852 CPSF3Q9UKF6 684 aaKnown RBP12.3□□□□□ -0.44
VPS26A-204ENST00000467852 DNHD1Q96M86 4753 aa12.3□□□□□ -0.44
VPS26A-204ENST00000467852 SFI1A8K8P3 1242 aa12.29□□□□□ -0.44
VPS26A-204ENST00000467852 FAM189A1O60320 539 aa12.29□□□□□ -0.44
VPS26A-204ENST00000467852 ATP2C2O75185 946 aa12.29□□□□□ -0.44
VPS26A-204ENST00000467852 KRT7P08729 469 aa12.29□□□□□ -0.44
VPS26A-204ENST00000467852 MAPTP10636 758 aaKnown RBP12.29□□□□□ -0.44
VPS26A-204ENST00000467852 DGKAP23743 735 aa12.29□□□□□ -0.44
VPS26A-204ENST00000467852 PDIA3P30101 505 aaKnown RBP12.29□□□□□ -0.44
VPS26A-204ENST00000467852 UQCRFS1P47985 274 aa12.29□□□□□ -0.44
VPS26A-204ENST00000467852 TUBP50607 506 aa12.29□□□□□ -0.44
VPS26A-204ENST00000467852 TSR1Q2NL82 804 aaKnown RBP12.29□□□□□ -0.44
VPS26A-204ENST00000467852 HAUS3Q68CZ6 603 aa12.29□□□□□ -0.44
VPS26A-204ENST00000467852 VASH2Q86V25 355 aa12.29□□□□□ -0.44
VPS26A-204ENST00000467852 OSTM1Q86WC4 334 aa12.29□□□□□ -0.44
VPS26A-204ENST00000467852 HEATR4Q86WZ0 1026 aa12.29□□□□□ -0.44
VPS26A-204ENST00000467852 OR2T34Q8NGX1 318 aa12.29□□□□□ -0.44
VPS26A-204ENST00000467852 C9orf43Q8TAL5 461 aaPredicted RBP12.29□□□□□ -0.44
VPS26A-204ENST00000467852 GTF3C6Q969F1 213 aa12.29□□□□□ -0.44
VPS26A-204ENST00000467852 ARRDC3Q96B67 414 aa12.29□□□□□ -0.44
VPS26A-204ENST00000467852 SYT15Q9BQS2 421 aa12.29□□□□□ -0.44
VPS26A-204ENST00000467852 MSTO1Q9BUK6 570 aa12.29□□□□□ -0.44
VPS26A-204ENST00000467852 ACSL6Q9UKU0 697 aa12.29□□□□□ -0.44
VPS26A-204ENST00000467852 TPX2Q9ULW0 747 aaKnown RBP12.29□□□□□ -0.44
VPS26A-204ENST00000467852 SCML1Q9UN30 329 aa12.29□□□□□ -0.44
VPS26A-204ENST00000467852 PCDHB11Q9Y5F2 797 aa12.29□□□□□ -0.44
VPS26A-204ENST00000467852 RP1P56715 2156 aa12.29□□□□□ -0.44
VPS26A-204ENST00000467852 SPG11Q96JI7 2443 aa12.28□□□□□ -0.44
VPS26A-204ENST00000467852 COL27A1Q8IZC6 1860 aaPredicted RBP12.28□□□□□ -0.44
VPS26A-204ENST00000467852 WIPF3A6NGB9 483 aa12.28□□□□□ -0.44
VPS26A-204ENST00000467852 GABRDO14764 452 aa12.28□□□□□ -0.44
VPS26A-204ENST00000467852 HCRTO43612 131 aa12.28□□□□□ -0.44
VPS26A-204ENST00000467852 SEMA7AO75326 666 aa12.28□□□□□ -0.44
VPS26A-204ENST00000467852 TCEA3O75764 348 aa12.28□□□□□ -0.44
VPS26A-204ENST00000467852 RTN3O95197 1032 aaPredicted RBP12.28□□□□□ -0.44
VPS26A-204ENST00000467852 OR52Z1P0C646 297 aa12.28□□□□□ -0.44
VPS26A-204ENST00000467852 CPA1P15085 419 aa12.28□□□□□ -0.44
VPS26A-204ENST00000467852 GNLYP22749 145 aa12.28□□□□□ -0.44
VPS26A-204ENST00000467852 CDC25AP30304 524 aa12.28□□□□□ -0.44
VPS26A-204ENST00000467852 CCR5P51681 352 aa12.28□□□□□ -0.44
VPS26A-204ENST00000467852 OVGP1Q12889 678 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms