RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 KCNJ18B7U540 433 aa18.05■□□□□ 0.48
TRIM56-203ENST00000467847 TULP2O00295 520 aa18.05■□□□□ 0.48
TRIM56-203ENST00000467847 XPO1O14980 1071 aaKnown RBP18.05■□□□□ 0.48
TRIM56-203ENST00000467847 PRKCHP24723 683 aa18.05■□□□□ 0.48
TRIM56-203ENST00000467847 OXTRP30559 389 aa18.05■□□□□ 0.48
TRIM56-203ENST00000467847 HARS2P49590 506 aaKnown RBP18.05■□□□□ 0.48
TRIM56-203ENST00000467847 TPMTP51580 245 aa18.05■□□□□ 0.48
TRIM56-203ENST00000467847 BCAT1P54687 386 aa18.05■□□□□ 0.48
TRIM56-203ENST00000467847 PDE4CQ08493 712 aa18.05■□□□□ 0.48
TRIM56-203ENST00000467847 GRIK2Q13002 908 aa18.05■□□□□ 0.48
TRIM56-203ENST00000467847 CBWD6Q4V339 395 aa18.05■□□□□ 0.48
TRIM56-203ENST00000467847 SGO2Q562F6 1265 aa18.05■□□□□ 0.48
TRIM56-203ENST00000467847 CBWD3Q5JTY5 395 aa18.05■□□□□ 0.48
TRIM56-203ENST00000467847 CBWD5Q5RIA9 395 aa18.05■□□□□ 0.48
TRIM56-203ENST00000467847 CACUL1Q86Y37 369 aa18.05■□□□□ 0.48
TRIM56-203ENST00000467847 FMNL3Q8IVF7 1028 aa18.05■□□□□ 0.48
TRIM56-203ENST00000467847 FAM217AQ8IXS0 508 aa18.05■□□□□ 0.48
TRIM56-203ENST00000467847 CADM4Q8NFZ8 388 aa18.05■□□□□ 0.48
TRIM56-203ENST00000467847 SORCS1Q8WY21 1168 aa18.05■□□□□ 0.48
TRIM56-203ENST00000467847 NDRG1Q92597 394 aaKnown RBP18.05■□□□□ 0.48
TRIM56-203ENST00000467847 PRCCQ92733 491 aaPredicted RBP18.05■□□□□ 0.48
TRIM56-203ENST00000467847 CAMK1GQ96NX5 476 aa18.05■□□□□ 0.48
TRIM56-203ENST00000467847 IPO9Q96P70 1041 aaKnown RBP18.05■□□□□ 0.48
TRIM56-203ENST00000467847 MIR1-1HGQ9H1L0 117 aa18.05■□□□□ 0.48
TRIM56-203ENST00000467847 LRRC4Q9HBW1 653 aa18.05■□□□□ 0.48
TRIM56-203ENST00000467847 HESX1Q9UBX0 185 aa18.05■□□□□ 0.48
TRIM56-203ENST00000467847 TSPAN16Q9UKR8 245 aa18.05■□□□□ 0.48
TRIM56-203ENST00000467847 MSRB2Q9Y3D2 182 aa18.05■□□□□ 0.48
TRIM56-203ENST00000467847 NFE2L3Q9Y4A8 694 aa18.05■□□□□ 0.48
TRIM56-203ENST00000467847 A0A1B0GTW7 788 aa18.04■□□□□ 0.48
TRIM56-203ENST00000467847 SLC16A3O15427 465 aaKnown RBP18.04■□□□□ 0.48
TRIM56-203ENST00000467847 TIMM44O43615 452 aa18.04■□□□□ 0.48
TRIM56-203ENST00000467847 SH3BP5O60239 455 aa18.04■□□□□ 0.48
TRIM56-203ENST00000467847 GJB3O75712 270 aa18.04■□□□□ 0.48
TRIM56-203ENST00000467847 EPHX1P07099 455 aa18.04■□□□□ 0.48
TRIM56-203ENST00000467847 ACADMP11310 421 aa18.04■□□□□ 0.48
TRIM56-203ENST00000467847 ADIGQ0VDE8 80 aa18.04■□□□□ 0.48
TRIM56-203ENST00000467847 BST2Q10589 180 aaKnown RBP18.04■□□□□ 0.48
TRIM56-203ENST00000467847 PNOCQ13519 176 aa18.04■□□□□ 0.48
TRIM56-203ENST00000467847 CUL2Q13617 745 aa18.04■□□□□ 0.48
TRIM56-203ENST00000467847 TRIP4Q15650 581 aaPredicted RBP18.04■□□□□ 0.48
TRIM56-203ENST00000467847 ZNF423Q2M1K9 1284 aa18.04■□□□□ 0.48
TRIM56-203ENST00000467847 MPPE1Q53F39 396 aa18.04■□□□□ 0.48
TRIM56-203ENST00000467847 SERPINA13PQ6UXR4 307 aa18.04■□□□□ 0.48
TRIM56-203ENST00000467847 BHLHA9Q7RTU4 235 aa18.04■□□□□ 0.48
TRIM56-203ENST00000467847 ZCCHC9Q8N567 271 aaKnown RBP18.04■□□□□ 0.48
TRIM56-203ENST00000467847 RNF139Q8WU17 664 aa18.04■□□□□ 0.48
TRIM56-203ENST00000467847 DNASE2BQ8WZ79 361 aa18.04■□□□□ 0.48
TRIM56-203ENST00000467847 TSG101Q99816 390 aa18.04■□□□□ 0.48
TRIM56-203ENST00000467847 ZDHHC5Q9C0B5 715 aa18.04■□□□□ 0.48
TRIM56-203ENST00000467847 RMND1Q9NWS8 449 aa18.04■□□□□ 0.48
TRIM56-203ENST00000467847 PCDHB9Q9Y5E1 797 aa18.04■□□□□ 0.48
TRIM56-203ENST00000467847 DMXL2Q8TDJ6 3036 aa18.04■□□□□ 0.48
TRIM56-203ENST00000467847 TSPAN3O60637 253 aa18.03■□□□□ 0.48
TRIM56-203ENST00000467847 CD19P15391 556 aa18.03■□□□□ 0.48
TRIM56-203ENST00000467847 HOXD9P28356 352 aaPredicted RBP18.03■□□□□ 0.48
TRIM56-203ENST00000467847 PRCPP42785 496 aa18.03■□□□□ 0.48
TRIM56-203ENST00000467847 COPAP53621 1224 aa18.03■□□□□ 0.48
TRIM56-203ENST00000467847 YWHAEP62258 255 aaKnown RBP18.03■□□□□ 0.48
TRIM56-203ENST00000467847 TRIP6Q15654 476 aaKnown RBP18.03■□□□□ 0.48
TRIM56-203ENST00000467847 DCAF12L1Q5VU92 463 aa18.03■□□□□ 0.48
TRIM56-203ENST00000467847 TMEM215Q68D42 235 aa18.03■□□□□ 0.48
TRIM56-203ENST00000467847 NAXDQ8IW45 347 aa18.03■□□□□ 0.48
TRIM56-203ENST00000467847 SIX6OS1Q8N1H7 587 aa18.03■□□□□ 0.48
TRIM56-203ENST00000467847 CHCHD4Q8N4Q1 142 aa18.03■□□□□ 0.48
TRIM56-203ENST00000467847 RBBP8NLQ8NC74 664 aaPredicted RBP18.03■□□□□ 0.48
TRIM56-203ENST00000467847 EDEM1Q92611 657 aa18.03■□□□□ 0.48
TRIM56-203ENST00000467847 NUP58Q9BVL2 599 aa18.03■□□□□ 0.48
TRIM56-203ENST00000467847 GDPD2Q9HCC8 539 aa18.03■□□□□ 0.48
TRIM56-203ENST00000467847 COQ4Q9Y3A0 265 aa18.03■□□□□ 0.48
TRIM56-203ENST00000467847 HBS1LQ9Y450 684 aaKnown RBP18.03■□□□□ 0.48
TRIM56-203ENST00000467847 IGLV3-19P01714 112 aa18.02■□□□□ 0.48
TRIM56-203ENST00000467847 BSPRYQ5W0U4 402 aa18.02■□□□□ 0.48
TRIM56-203ENST00000467847 UBA3Q8TBC4 463 aa18.02■□□□□ 0.48
TRIM56-203ENST00000467847 SFMBT1Q9UHJ3 866 aa18.02■□□□□ 0.48
TRIM56-203ENST00000467847 NUMA1Q14980 2115 aa18.02■□□□□ 0.47
TRIM56-203ENST00000467847 KNL1Q8NG31 2342 aa18.01■□□□□ 0.47
TRIM56-203ENST00000467847 FREM2Q5SZK8 3169 aa18.01■□□□□ 0.47
TRIM56-203ENST00000467847 YJEFN3A6XGL0 299 aa18.01■□□□□ 0.47
TRIM56-203ENST00000467847 METTL12A8MUP2 240 aa18.01■□□□□ 0.47
TRIM56-203ENST00000467847 E7ENQ6 273 aa18.01■□□□□ 0.47
TRIM56-203ENST00000467847 BCAT2O15382 392 aaPredicted RBP18.01■□□□□ 0.47
TRIM56-203ENST00000467847 VDRP11473 427 aa18.01■□□□□ 0.47
TRIM56-203ENST00000467847 HLA-EP13747 358 aa18.01■□□□□ 0.47
TRIM56-203ENST00000467847 HLA-FP30511 346 aa18.01■□□□□ 0.47
TRIM56-203ENST00000467847 ZNF445P59923 1031 aa18.01■□□□□ 0.47
TRIM56-203ENST00000467847 FKBP3Q00688 224 aaKnown RBP18.01■□□□□ 0.47
TRIM56-203ENST00000467847 LRMPQ12912 555 aa18.01■□□□□ 0.47
TRIM56-203ENST00000467847 FNDC3BQ53EP0 1204 aaKnown RBP18.01■□□□□ 0.47
TRIM56-203ENST00000467847 ZNF658Q5TYW1 1059 aaPredicted RBP18.01■□□□□ 0.47
TRIM56-203ENST00000467847 ANKRD40Q6AI12 368 aa18.01■□□□□ 0.47
TRIM56-203ENST00000467847 RAB44Q7Z6P3 723 aaPredicted RBP18.01■□□□□ 0.47
TRIM56-203ENST00000467847 FAM124AQ86V42 546 aa18.01■□□□□ 0.47
TRIM56-203ENST00000467847 OR2T3Q8NH03 318 aa18.01■□□□□ 0.47
TRIM56-203ENST00000467847 TMA16Q96EY4 203 aaKnown RBP18.01■□□□□ 0.47
TRIM56-203ENST00000467847 ABCC13Q9NSE7 274 aa18.01■□□□□ 0.47
TRIM56-203ENST00000467847 PLA2G4CQ9UP65 541 aa18.01■□□□□ 0.47
TRIM56-203ENST00000467847 MUC22E2RYF6 1773 aaPredicted RBP18.01■□□□□ 0.47
TRIM56-203ENST00000467847 ITPR1Q14643 2758 aa18■□□□□ 0.47
TRIM56-203ENST00000467847 O00370 1275 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms