RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 I6L893 689 aaPredicted RBP11.48□□□□□ -0.57
MSH5-212ENST00000467319 ACSL4O60488 711 aa11.48□□□□□ -0.57
MSH5-212ENST00000467319 RTN2O75298 545 aa11.48□□□□□ -0.57
MSH5-212ENST00000467319 ENDOD1O94919 500 aa11.48□□□□□ -0.57
MSH5-212ENST00000467319 GJB6O95452 261 aa11.48□□□□□ -0.57
MSH5-212ENST00000467319 FAM228BP0C875 321 aa11.48□□□□□ -0.57
MSH5-212ENST00000467319 HOXD9P28356 352 aaPredicted RBP11.48□□□□□ -0.57
MSH5-212ENST00000467319 SLC6A4P31645 630 aa11.48□□□□□ -0.57
MSH5-212ENST00000467319 RFC1P35251 1148 aaPredicted RBP11.48□□□□□ -0.57
MSH5-212ENST00000467319 CHKAP35790 457 aa11.48□□□□□ -0.57
MSH5-212ENST00000467319 MAGEA9P43362 315 aa11.48□□□□□ -0.57
MSH5-212ENST00000467319 PTPN9P43378 593 aa11.48□□□□□ -0.57
MSH5-212ENST00000467319 CXCR3P49682 368 aa11.48□□□□□ -0.57
MSH5-212ENST00000467319 SULT1E1P49888 294 aa11.48□□□□□ -0.57
MSH5-212ENST00000467319 AMPD2Q01433 879 aa11.48□□□□□ -0.57
MSH5-212ENST00000467319 GAD2Q05329 585 aa11.48□□□□□ -0.57
MSH5-212ENST00000467319 MAPK8IP2Q13387 824 aaPredicted RBP11.48□□□□□ -0.57
MSH5-212ENST00000467319 PON2Q15165 354 aa11.48□□□□□ -0.57
MSH5-212ENST00000467319 ZC3H12AQ5D1E8 599 aaKnown RBP11.48□□□□□ -0.57
MSH5-212ENST00000467319 ADGRF1Q5T601 910 aa11.48□□□□□ -0.57
MSH5-212ENST00000467319 PLEKHA7Q6IQ23 1121 aa11.48□□□□□ -0.57
MSH5-212ENST00000467319 DNAJC24Q6P3W2 148 aa11.48□□□□□ -0.57
MSH5-212ENST00000467319 TC2NQ8N9U0 490 aa11.48□□□□□ -0.57
MSH5-212ENST00000467319 CD101Q93033 1021 aa11.48□□□□□ -0.57
MSH5-212ENST00000467319 BTN2A3PQ96KV6 586 aa11.48□□□□□ -0.57
MSH5-212ENST00000467319 P2RY13Q9BPV8 354 aa11.48□□□□□ -0.57
MSH5-212ENST00000467319 IER2Q9BTL4 223 aa11.48□□□□□ -0.57
MSH5-212ENST00000467319 CHRDQ9H2X0 955 aa11.48□□□□□ -0.57
MSH5-212ENST00000467319 FBRSL1Q9HCM7 1045 aaKnown RBP11.48□□□□□ -0.57
MSH5-212ENST00000467319 PIGVQ9NUD9 493 aa11.48□□□□□ -0.57
MSH5-212ENST00000467319 TMEM51Q9NW97 253 aa11.48□□□□□ -0.57
MSH5-212ENST00000467319 ADAMTS1Q9UHI8 967 aa11.48□□□□□ -0.57
MSH5-212ENST00000467319 XPO7Q9UIA9 1087 aaKnown RBP11.48□□□□□ -0.57
MSH5-212ENST00000467319 NDRG2Q9UN36 371 aaKnown RBP11.48□□□□□ -0.57
MSH5-212ENST00000467319 SIT1Q9Y3P8 196 aa11.48□□□□□ -0.57
MSH5-212ENST00000467319 MUC22E2RYF6 1773 aaPredicted RBP11.48□□□□□ -0.57
MSH5-212ENST00000467319 MYOFQ9NZM1 2061 aa11.48□□□□□ -0.57
MSH5-212ENST00000467319 TMCO5BA8MYB1 307 aa11.47□□□□□ -0.57
MSH5-212ENST00000467319 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.47□□□□□ -0.57
MSH5-212ENST00000467319 NEDD8-MDP1E9PL57 170 aa11.47□□□□□ -0.57
MSH5-212ENST00000467319 M0QYT0 321 aa11.47□□□□□ -0.57
MSH5-212ENST00000467319 ATMINO43313 823 aaPredicted RBP11.47□□□□□ -0.57
MSH5-212ENST00000467319 TULP3O75386 442 aa11.47□□□□□ -0.57
MSH5-212ENST00000467319 APOEP02649 317 aa11.47□□□□□ -0.57
MSH5-212ENST00000467319 FTLP02792 175 aaPredicted RBP11.47□□□□□ -0.57
MSH5-212ENST00000467319 DCNP07585 359 aaKnown RBP11.47□□□□□ -0.57
MSH5-212ENST00000467319 TPM1P09493 284 aa11.47□□□□□ -0.57
MSH5-212ENST00000467319 MYBL1P10243 752 aa11.47□□□□□ -0.57
MSH5-212ENST00000467319 SLC2A3P11169 496 aa11.47□□□□□ -0.57
MSH5-212ENST00000467319 KRT3P12035 628 aa11.47□□□□□ -0.57
MSH5-212ENST00000467319 TYRP14679 529 aa11.47□□□□□ -0.57
MSH5-212ENST00000467319 DRD1P21728 446 aa11.47□□□□□ -0.57
MSH5-212ENST00000467319 FECHP22830 423 aa11.47□□□□□ -0.57
MSH5-212ENST00000467319 CDC25BP30305 580 aa11.47□□□□□ -0.57
MSH5-212ENST00000467319 AVPR2P30518 371 aa11.47□□□□□ -0.57
MSH5-212ENST00000467319 CCR1P32246 355 aa11.47□□□□□ -0.57
MSH5-212ENST00000467319 GBP1P32455 592 aa11.47□□□□□ -0.57
MSH5-212ENST00000467319 EIF4A3P38919 411 aaKnown RBP11.47□□□□□ -0.57
MSH5-212ENST00000467319 SLC11A2P49281 568 aa11.47□□□□□ -0.57
MSH5-212ENST00000467319 SGSHP51688 502 aa11.47□□□□□ -0.57
MSH5-212ENST00000467319 NUBP1P53384 320 aa11.47□□□□□ -0.57
MSH5-212ENST00000467319 ADKP55263 362 aaKnown RBP11.47□□□□□ -0.57
MSH5-212ENST00000467319 RNASE9P60153 205 aaKnown RBP11.47□□□□□ -0.57
MSH5-212ENST00000467319 MAMLD1Q13495 774 aa11.47□□□□□ -0.57
MSH5-212ENST00000467319 LRRC32Q14392 662 aa11.47□□□□□ -0.57
MSH5-212ENST00000467319 CCDC14Q49A88 953 aa11.47□□□□□ -0.57
MSH5-212ENST00000467319 BRMS1LQ5PSV4 323 aa11.47□□□□□ -0.57
MSH5-212ENST00000467319 ARTNQ5T4W7 220 aa11.47□□□□□ -0.57
MSH5-212ENST00000467319 PIK3R6Q5UE93 754 aa11.47□□□□□ -0.57
MSH5-212ENST00000467319 PHLDB2Q86SQ0 1253 aa11.47□□□□□ -0.57
MSH5-212ENST00000467319 VPS36Q86VN1 386 aa11.47□□□□□ -0.57
MSH5-212ENST00000467319 DNAAF5Q86Y56 855 aa11.47□□□□□ -0.57
MSH5-212ENST00000467319 CENPIQ92674 756 aaPredicted RBP11.47□□□□□ -0.57
MSH5-212ENST00000467319 MYEOVQ96EZ4 313 aa11.47□□□□□ -0.57
MSH5-212ENST00000467319 TRIM11Q96F44 468 aa11.47□□□□□ -0.57
MSH5-212ENST00000467319 CFAP57Q96MR6 1250 aa11.47□□□□□ -0.57
MSH5-212ENST00000467319 MCEEQ96PE7 176 aa11.47□□□□□ -0.57
MSH5-212ENST00000467319 PRMT1Q99873 361 aaKnown RBP11.47□□□□□ -0.57
MSH5-212ENST00000467319 BBS2Q9BXC9 721 aa11.47□□□□□ -0.57
MSH5-212ENST00000467319 ANLNQ9NQW6 1124 aa11.47□□□□□ -0.57
MSH5-212ENST00000467319 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.47□□□□□ -0.57
MSH5-212ENST00000467319 ARHGEF38Q9NXL2 777 aa11.47□□□□□ -0.57
MSH5-212ENST00000467319 FBXO10Q9UK96 956 aa11.47□□□□□ -0.57
MSH5-212ENST00000467319 AKR1B15C9JRZ8 316 aaPredicted RBP11.46□□□□□ -0.57
MSH5-212ENST00000467319 EGFP01133 1207 aa11.46□□□□□ -0.57
MSH5-212ENST00000467319 SDC4P31431 198 aa11.46□□□□□ -0.57
MSH5-212ENST00000467319 RDXP35241 583 aaKnown RBP11.46□□□□□ -0.57
MSH5-212ENST00000467319 GALK1P51570 392 aa11.46□□□□□ -0.57
MSH5-212ENST00000467319 ZNF143P52747 638 aaPredicted RBP11.46□□□□□ -0.57
MSH5-212ENST00000467319 ATXN1P54253 815 aaKnown RBP11.46□□□□□ -0.57
MSH5-212ENST00000467319 HDAC4P56524 1084 aa11.46□□□□□ -0.57
MSH5-212ENST00000467319 RPL7AP62424 266 aaKnown RBP11.46□□□□□ -0.57
MSH5-212ENST00000467319 OGDHQ02218 1023 aa11.46□□□□□ -0.57
MSH5-212ENST00000467319 ZNF252P-AS1Q0IIN9 211 aa11.46□□□□□ -0.57
MSH5-212ENST00000467319 GRSF1Q12849 480 aaKnown RBP eCLIP11.46□□□□□ -0.57
MSH5-212ENST00000467319 NME3Q13232 169 aa11.46□□□□□ -0.57
MSH5-212ENST00000467319 MTA1Q13330 715 aa11.46□□□□□ -0.57
MSH5-212ENST00000467319 GAS6Q14393 721 aa11.46□□□□□ -0.57
MSH5-212ENST00000467319 SLC18A3Q16572 532 aa11.46□□□□□ -0.57
MSH5-212ENST00000467319 ANO4Q32M45 955 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms