RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 NSUN2Q08J23 767 aaKnown RBP eCLIP5.17□□□□□ -1.58
PRPF40A-205ENST00000467114 PTK2BQ14289 1009 aa5.17□□□□□ -1.58
PRPF40A-205ENST00000467114 BRD3Q15059 726 aa5.17□□□□□ -1.58
PRPF40A-205ENST00000467114 ARHGAP15Q53QZ3 475 aa5.17□□□□□ -1.58
PRPF40A-205ENST00000467114 ARL6IP4Q66PJ3 421 aaKnown RBP5.17□□□□□ -1.58
PRPF40A-205ENST00000467114 VSTM1Q6UX27 236 aa5.17□□□□□ -1.58
PRPF40A-205ENST00000467114 UBE2Q1Q7Z7E8 422 aa5.17□□□□□ -1.58
PRPF40A-205ENST00000467114 SYTL1Q8IYJ3 562 aa5.17□□□□□ -1.58
PRPF40A-205ENST00000467114 C11orf44Q8N8P7 122 aa5.17□□□□□ -1.58
PRPF40A-205ENST00000467114 IGFBPL1Q8WX77 278 aa5.17□□□□□ -1.58
PRPF40A-205ENST00000467114 NUDT22Q9BRQ3 303 aa5.17□□□□□ -1.58
PRPF40A-205ENST00000467114 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.17□□□□□ -1.585e-15■■□□□ 12.5
PRPF40A-205ENST00000467114 ARFGAP3Q9NP61 516 aa5.17□□□□□ -1.58
PRPF40A-205ENST00000467114 POT1Q9NUX5 634 aa5.17□□□□□ -1.58
PRPF40A-205ENST00000467114 STEAP1Q9UHE8 339 aa5.17□□□□□ -1.58
PRPF40A-205ENST00000467114 MAFFQ9ULX9 164 aa5.17□□□□□ -1.58
PRPF40A-205ENST00000467114 WDR47O94967 919 aa5.16□□□□□ -1.58
PRPF40A-205ENST00000467114 TOMM40O96008 361 aa5.16□□□□□ -1.58
PRPF40A-205ENST00000467114 LDHAP00338 332 aaKnown RBP5.16□□□□□ -1.58
PRPF40A-205ENST00000467114 ALPLP05186 524 aa5.16□□□□□ -1.58
PRPF40A-205ENST00000467114 PBX1P40424 430 aa5.16□□□□□ -1.58
PRPF40A-205ENST00000467114 TECP42680 631 aa5.16□□□□□ -1.58
PRPF40A-205ENST00000467114 MTHFSP49914 203 aa5.16□□□□□ -1.58
PRPF40A-205ENST00000467114 TNFAIP2Q03169 654 aa5.16□□□□□ -1.58
PRPF40A-205ENST00000467114 BIRC2Q13490 618 aa5.16□□□□□ -1.58
PRPF40A-205ENST00000467114 DNASE1L3Q13609 305 aa5.16□□□□□ -1.58
PRPF40A-205ENST00000467114 KCNB1Q14721 858 aa5.16□□□□□ -1.58
PRPF40A-205ENST00000467114 FAM83BQ5T0W9 1011 aa5.16□□□□□ -1.58
PRPF40A-205ENST00000467114 CLEC9AQ6UXN8 241 aa5.16□□□□□ -1.58
PRPF40A-205ENST00000467114 ANKRD13BQ86YJ7 626 aa5.16□□□□□ -1.58
PRPF40A-205ENST00000467114 ARFGAP1Q8N6T3 406 aa5.16□□□□□ -1.58
PRPF40A-205ENST00000467114 OR1N1Q8NGS0 311 aa5.16□□□□□ -1.58
PRPF40A-205ENST00000467114 IPO4Q8TEX9 1081 aaKnown RBP5.16□□□□□ -1.58
PRPF40A-205ENST00000467114 EID2BQ96D98 161 aa5.16□□□□□ -1.58
PRPF40A-205ENST00000467114 EDC3Q96F86 508 aaKnown RBP5.16□□□□□ -1.58
PRPF40A-205ENST00000467114 ZFYVE19Q96K21 471 aa5.16□□□□□ -1.58
PRPF40A-205ENST00000467114 HS6ST2Q96MM7 605 aa5.16□□□□□ -1.58
PRPF40A-205ENST00000467114 PAAF1Q9BRP4 392 aa5.16□□□□□ -1.58
PRPF40A-205ENST00000467114 NKX1-2Q9UD57 310 aaPredicted RBP5.16□□□□□ -1.58
PRPF40A-205ENST00000467114 M0QZQ0 153 aa5.15□□□□□ -1.59
PRPF40A-205ENST00000467114 FFAR2O15552 330 aa5.15□□□□□ -1.59
PRPF40A-205ENST00000467114 GLP2RO95838 553 aa5.15□□□□□ -1.59
PRPF40A-205ENST00000467114 PSG1P11464 419 aa5.15□□□□□ -1.59
PRPF40A-205ENST00000467114 CYP19A1P11511 503 aaPredicted RBP5.15□□□□□ -1.59
PRPF40A-205ENST00000467114 CD19P15391 556 aa5.15□□□□□ -1.59
PRPF40A-205ENST00000467114 NPPBP16860 134 aa5.15□□□□□ -1.59
PRPF40A-205ENST00000467114 ME1P48163 572 aa5.15□□□□□ -1.59
PRPF40A-205ENST00000467114 NANOS2P60321 138 aaKnown RBP5.15□□□□□ -1.59
PRPF40A-205ENST00000467114 GPS1Q13098 491 aa5.15□□□□□ -1.59
PRPF40A-205ENST00000467114 SPARCL1Q14515 664 aa5.15□□□□□ -1.59
PRPF40A-205ENST00000467114 C10orf62Q5T681 223 aaPredicted RBP5.15□□□□□ -1.59
PRPF40A-205ENST00000467114 KIAA1161Q6NSJ0 714 aa5.15□□□□□ -1.59
PRPF40A-205ENST00000467114 ERAP2Q6P179 960 aa5.15□□□□□ -1.59
PRPF40A-205ENST00000467114 TLDC1Q6P9B6 456 aa5.15□□□□□ -1.59
PRPF40A-205ENST00000467114 PIK3AP1Q6ZUJ8 805 aa5.15□□□□□ -1.59
PRPF40A-205ENST00000467114 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.15□□□□□ -1.59
PRPF40A-205ENST00000467114 CLASRPQ8N2M8 674 aaKnown RBP5.15□□□□□ -1.59
PRPF40A-205ENST00000467114 CCDC150Q8NCX0 1101 aa5.15□□□□□ -1.59
PRPF40A-205ENST00000467114 ACRBPQ8NEB7 543 aa5.15□□□□□ -1.59
PRPF40A-205ENST00000467114 ZNF548Q8NEK5 533 aaPredicted RBP5.15□□□□□ -1.59
PRPF40A-205ENST00000467114 FAM71BQ8TC56 605 aa5.15□□□□□ -1.59
PRPF40A-205ENST00000467114 ABHD5Q8WTS1 349 aa5.15□□□□□ -1.59
PRPF40A-205ENST00000467114 POF1BQ8WVV4 589 aa5.15□□□□□ -1.59
PRPF40A-205ENST00000467114 PRR11Q96HE9 360 aaPredicted RBP5.15□□□□□ -1.59
PRPF40A-205ENST00000467114 LYZL4Q96KX0 146 aa5.15□□□□□ -1.59
PRPF40A-205ENST00000467114 ZCWPW1Q9H0M4 648 aa5.15□□□□□ -1.59
PRPF40A-205ENST00000467114 TMOD4Q9NZQ9 345 aa5.15□□□□□ -1.59
PRPF40A-205ENST00000467114 HS3ST3B1Q9Y662 390 aa5.15□□□□□ -1.59
PRPF40A-205ENST00000467114 FAM90A8PA6NJQ4 464 aa5.14□□□□□ -1.59
PRPF40A-205ENST00000467114 AQP12BA6NM10 295 aa5.14□□□□□ -1.59
PRPF40A-205ENST00000467114 LGALS16A8MUM7 142 aa5.14□□□□□ -1.59
PRPF40A-205ENST00000467114 SYT5O00445 386 aa5.14□□□□□ -1.59
PRPF40A-205ENST00000467114 TAF5LO75529 589 aa5.14□□□□□ -1.59
PRPF40A-205ENST00000467114 FAM90A13PP0C7W8 464 aa5.14□□□□□ -1.59
PRPF40A-205ENST00000467114 FAM90A24PP0C7X0 464 aa5.14□□□□□ -1.59
PRPF40A-205ENST00000467114 VEGFAP15692 232 aaPredicted RBP5.14□□□□□ -1.59
PRPF40A-205ENST00000467114 EIF4A1P60842 406 aaKnown RBP5.14□□□□□ -1.59
PRPF40A-205ENST00000467114 HSF1Q00613 529 aa5.14□□□□□ -1.59
PRPF40A-205ENST00000467114 PUM3Q15397 648 aaKnown RBP5.14□□□□□ -1.59
PRPF40A-205ENST00000467114 ST3GAL2Q16842 350 aa5.14□□□□□ -1.59
PRPF40A-205ENST00000467114 TRIM60Q495X7 471 aa5.14□□□□□ -1.59
PRPF40A-205ENST00000467114 MSANTD2Q6P1R3 559 aa5.14□□□□□ -1.59
PRPF40A-205ENST00000467114 PIM3Q86V86 326 aa5.14□□□□□ -1.59
PRPF40A-205ENST00000467114 C12orf76Q8N812 135 aaPredicted RBP5.14□□□□□ -1.59
PRPF40A-205ENST00000467114 PNPLA1Q8N8W4 532 aa5.14□□□□□ -1.59
PRPF40A-205ENST00000467114 STYXQ8WUJ0 223 aa5.14□□□□□ -1.59
PRPF40A-205ENST00000467114 ARPC5LQ9BPX5 153 aa5.14□□□□□ -1.59
PRPF40A-205ENST00000467114 TRMOQ9BU70 441 aa5.14□□□□□ -1.59
PRPF40A-205ENST00000467114 PTPRHQ9HD43 1115 aa5.14□□□□□ -1.59
PRPF40A-205ENST00000467114 OBP2BQ9NPH6 170 aa5.14□□□□□ -1.59
PRPF40A-205ENST00000467114 VPS45Q9NRW7 570 aa5.14□□□□□ -1.59
PRPF40A-205ENST00000467114 WWOXQ9NZC7 414 aa5.14□□□□□ -1.59
PRPF40A-205ENST00000467114 COMMD10Q9Y6G5 202 aa5.14□□□□□ -1.59
PRPF40A-205ENST00000467114 CLIC1O00299 241 aa5.13□□□□□ -1.59
PRPF40A-205ENST00000467114 PIP5K1BO14986 540 aa5.13□□□□□ -1.59
PRPF40A-205ENST00000467114 CTIFO43310 598 aaKnown RBP5.13□□□□□ -1.59
PRPF40A-205ENST00000467114 CCNT2O60583 730 aaKnown RBP5.13□□□□□ -1.59
PRPF40A-205ENST00000467114 SNX2O60749 519 aa5.13□□□□□ -1.59
PRPF40A-205ENST00000467114 CRYABP02511 175 aaKnown RBP5.13□□□□□ -1.59
PRPF40A-205ENST00000467114 ANXA6P08133 673 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms