RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 NUP205Q92621 2012 aa18.28■□□□□ 0.52
COL7A1-206ENST00000466591 CAPN9O14815 690 aa18.27■□□□□ 0.52
COL7A1-206ENST00000466591 TM4SF5O14894 197 aa18.27■□□□□ 0.52
COL7A1-206ENST00000466591 MED7O43513 233 aa18.27■□□□□ 0.52
COL7A1-206ENST00000466591 CD6P30203 668 aa18.27■□□□□ 0.52
COL7A1-206ENST00000466591 IL12RB1P42701 662 aa18.27■□□□□ 0.52
COL7A1-206ENST00000466591 DAOAP59103 153 aa18.27■□□□□ 0.52
COL7A1-206ENST00000466591 KCNH2Q12809 1159 aa18.27■□□□□ 0.52
COL7A1-206ENST00000466591 FOXC1Q12948 553 aa18.27■□□□□ 0.52
COL7A1-206ENST00000466591 ZNF234Q14588 700 aa18.27■□□□□ 0.52
COL7A1-206ENST00000466591 TRIP4Q15650 581 aaPredicted RBP18.27■□□□□ 0.52
COL7A1-206ENST00000466591 CNGA2Q16280 664 aa18.27■□□□□ 0.52
COL7A1-206ENST00000466591 ST3GAL2Q16842 350 aa18.27■□□□□ 0.52
COL7A1-206ENST00000466591 TPD52L1Q16890 204 aaPredicted RBP18.27■□□□□ 0.52
COL7A1-206ENST00000466591 PLEKHG6Q3KR16 790 aa18.27■□□□□ 0.52
COL7A1-206ENST00000466591 FUT11Q495W5 492 aa18.27■□□□□ 0.52
COL7A1-206ENST00000466591 ADGRF1Q5T601 910 aa18.27■□□□□ 0.52
COL7A1-206ENST00000466591 NUGGCQ68CJ6 796 aa18.27■□□□□ 0.52
COL7A1-206ENST00000466591 TTI2Q6NXR4 508 aa18.27■□□□□ 0.52
COL7A1-206ENST00000466591 SLC23A3Q6PIS1 610 aa18.27■□□□□ 0.52
COL7A1-206ENST00000466591 IRGQQ8WZA9 623 aa18.27■□□□□ 0.52
COL7A1-206ENST00000466591 SIPA1Q96FS4 1042 aa18.27■□□□□ 0.52
COL7A1-206ENST00000466591 SRRTQ9BXP5 876 aaKnown RBP18.27■□□□□ 0.52
COL7A1-206ENST00000466591 MIR1-1HGQ9H1L0 117 aa18.27■□□□□ 0.52
COL7A1-206ENST00000466591 THAP10Q9P2Z0 257 aaPredicted RBP18.27■□□□□ 0.52
COL7A1-206ENST00000466591 HCN2Q9UL51 889 aa18.27■□□□□ 0.52
COL7A1-206ENST00000466591 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.27■□□□□ 0.52
COL7A1-206ENST00000466591 SART1O43290 800 aaKnown RBP18.26■□□□□ 0.51
COL7A1-206ENST00000466591 OPHN1O60890 802 aa18.26■□□□□ 0.51
COL7A1-206ENST00000466591 FBXO21O94952 628 aa18.26■□□□□ 0.51
COL7A1-206ENST00000466591 LATS1O95835 1130 aa18.26■□□□□ 0.51
COL7A1-206ENST00000466591 LTFP02788 710 aa18.26■□□□□ 0.51
COL7A1-206ENST00000466591 SERPINF2P08697 491 aa18.26■□□□□ 0.51
COL7A1-206ENST00000466591 NCAM1P13591 858 aa18.26■□□□□ 0.51
COL7A1-206ENST00000466591 CEACAM1P13688 526 aa18.26■□□□□ 0.51
COL7A1-206ENST00000466591 OXTRP30559 389 aa18.26■□□□□ 0.51
COL7A1-206ENST00000466591 USP8P40818 1118 aa18.26■□□□□ 0.51
COL7A1-206ENST00000466591 TBX4P57082 545 aa18.26■□□□□ 0.51
COL7A1-206ENST00000466591 MORC3Q14149 939 aa18.26■□□□□ 0.51
COL7A1-206ENST00000466591 TMPRSS6Q8IU80 811 aa18.26■□□□□ 0.51
COL7A1-206ENST00000466591 ZNF557Q8N988 423 aaPredicted RBP18.26■□□□□ 0.51
COL7A1-206ENST00000466591 EHBP1Q8NDI1 1231 aa18.26■□□□□ 0.51
COL7A1-206ENST00000466591 DEFB124Q8NES8 71 aa18.26■□□□□ 0.51
COL7A1-206ENST00000466591 WFIKKN2Q8TEU8 576 aa18.26■□□□□ 0.51
COL7A1-206ENST00000466591 TFAP2BQ92481 460 aa18.26■□□□□ 0.51
COL7A1-206ENST00000466591 TRIM62Q9BVG3 475 aa18.26■□□□□ 0.51
COL7A1-206ENST00000466591 INTS2Q9H0H0 1204 aaKnown RBP18.26■□□□□ 0.51
COL7A1-206ENST00000466591 FBXO10Q9UK96 956 aa18.26■□□□□ 0.51
COL7A1-206ENST00000466591 SPTBN2O15020 2390 aa18.25■□□□□ 0.51
COL7A1-206ENST00000466591 PPP1R3GB7ZBB8 358 aa18.25■□□□□ 0.51
COL7A1-206ENST00000466591 PMM2O15305 246 aa18.25■□□□□ 0.51
COL7A1-206ENST00000466591 ATP5BP06576 529 aaKnown RBP18.25■□□□□ 0.51
COL7A1-206ENST00000466591 CSRP1P21291 193 aaKnown RBP18.25■□□□□ 0.51
COL7A1-206ENST00000466591 RDXP35241 583 aaKnown RBP18.25■□□□□ 0.51
COL7A1-206ENST00000466591 GCNT1Q02742 428 aa18.25■□□□□ 0.51
COL7A1-206ENST00000466591 PMF1Q6P1K2 205 aa18.25■□□□□ 0.51
COL7A1-206ENST00000466591 CHST9Q7L1S5 443 aa18.25■□□□□ 0.51
COL7A1-206ENST00000466591 ARHGEF19Q8IW93 802 aa18.25■□□□□ 0.51
COL7A1-206ENST00000466591 AHI1Q8N157 1196 aa18.25■□□□□ 0.51
COL7A1-206ENST00000466591 SORCS1Q8WY21 1168 aa18.25■□□□□ 0.51
COL7A1-206ENST00000466591 SNX19Q92543 992 aa18.25■□□□□ 0.51
COL7A1-206ENST00000466591 KAT5Q92993 513 aa18.25■□□□□ 0.51
COL7A1-206ENST00000466591 TOE1Q96GM8 510 aaKnown RBP18.25■□□□□ 0.51
COL7A1-206ENST00000466591 PIWIL1Q96J94 861 aaKnown RBP18.25■□□□□ 0.51
COL7A1-206ENST00000466591 HSFY1Q96LI6 401 aa18.25■□□□□ 0.51
COL7A1-206ENST00000466591 GPR174Q9BXC1 333 aa18.25■□□□□ 0.51
COL7A1-206ENST00000466591 UBE2TQ9NPD8 197 aaPredicted RBP18.25■□□□□ 0.51
COL7A1-206ENST00000466591 FSCN3Q9NQT6 498 aa18.25■□□□□ 0.51
COL7A1-206ENST00000466591 ABCB8Q9NUT2 735 aa18.25■□□□□ 0.51
COL7A1-206ENST00000466591 STIM2Q9P246 746 aa18.25■□□□□ 0.51
COL7A1-206ENST00000466591 CDX4O14627 284 aaPredicted RBP18.24■□□□□ 0.51
COL7A1-206ENST00000466591 GIPC1O14908 333 aa18.24■□□□□ 0.51
COL7A1-206ENST00000466591 THAP12O43422 761 aa18.24■□□□□ 0.51
COL7A1-206ENST00000466591 TBL1XO60907 577 aa18.24■□□□□ 0.51
COL7A1-206ENST00000466591 GADD45BO75293 160 aaPredicted RBP18.24■□□□□ 0.51
COL7A1-206ENST00000466591 POLR2EP19388 210 aaKnown RBP18.24■□□□□ 0.51
COL7A1-206ENST00000466591 HOXD9P28356 352 aaPredicted RBP18.24■□□□□ 0.51
COL7A1-206ENST00000466591 PMLP29590 882 aa18.24■□□□□ 0.51
COL7A1-206ENST00000466591 ST8SIA6P61647 398 aa18.24■□□□□ 0.51
COL7A1-206ENST00000466591 FAM124AQ86V42 546 aa18.24■□□□□ 0.51
COL7A1-206ENST00000466591 SCML4Q8N228 414 aa18.24■□□□□ 0.51
COL7A1-206ENST00000466591 UBR7Q8N806 425 aa18.24■□□□□ 0.51
COL7A1-206ENST00000466591 CYB5D2Q8WUJ1 264 aa18.24■□□□□ 0.51
COL7A1-206ENST00000466591 SLC35F5Q8WV83 523 aa18.24■□□□□ 0.51
COL7A1-206ENST00000466591 SERPINB11Q96P15 392 aa18.24■□□□□ 0.51
COL7A1-206ENST00000466591 GGA2Q9UJY4 613 aa18.24■□□□□ 0.51
COL7A1-206ENST00000466591 CEP83Q9Y592 693 aa18.24■□□□□ 0.51
COL7A1-206ENST00000466591 MYO18AQ92614 2054 aaKnown RBP18.24■□□□□ 0.51
COL7A1-206ENST00000466591 RNF225M0QZC1 329 aaPredicted RBP18.23■□□□□ 0.51
COL7A1-206ENST00000466591 ARHGAP33O14559 1287 aa18.23■□□□□ 0.51
COL7A1-206ENST00000466591 LETM1O95202 739 aaPredicted RBP18.23■□□□□ 0.51
COL7A1-206ENST00000466591 MOCS2O96007 188 aaPredicted RBP18.23■□□□□ 0.51
COL7A1-206ENST00000466591 CALCAP01258 141 aa18.23■□□□□ 0.51
COL7A1-206ENST00000466591 APOEP02649 317 aa18.23■□□□□ 0.51
COL7A1-206ENST00000466591 PRKCHP24723 683 aa18.23■□□□□ 0.51
COL7A1-206ENST00000466591 ACADSBP45954 432 aa18.23■□□□□ 0.51
COL7A1-206ENST00000466591 CDH18Q13634 790 aa18.23■□□□□ 0.51
COL7A1-206ENST00000466591 CAMK4Q16566 473 aa18.23■□□□□ 0.51
COL7A1-206ENST00000466591 FOXR2Q6PJQ5 311 aa18.23■□□□□ 0.51
COL7A1-206ENST00000466591 BHLHA9Q7RTU4 235 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms