RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 RETSATQ6NUM9 610 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 SYT13Q7L8C5 426 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 GRASPQ7Z6J2 395 aaPredicted RBP4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 PEG10Q86TG7 708 aaKnown RBP4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 TMTC1Q8IUR5 882 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 TBC1D3Q8IZP1 549 aaPredicted RBP4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 ESX1Q8N693 406 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 PTGR2Q8N8N7 351 aaPredicted RBP4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 SRFBP1Q8NEF9 429 aaKnown RBP4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 KTI12Q96EK9 354 aaPredicted RBP4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 EDC3Q96F86 508 aaKnown RBP4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 SEC62Q99442 399 aaKnown RBP4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 PRRX2Q99811 253 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 RNF26Q9BY78 433 aaPredicted RBP4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 TOR3AQ9H497 397 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 TMEM160Q9NX00 188 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 FOXJ2Q9P0K8 574 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 SEMA5BQ9P283 1151 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 IFT80Q9P2H3 777 aaPredicted RBP4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 PNMA2Q9UL42 364 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 FZD4Q9ULV1 537 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 MYRFQ9Y2G1 1151 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 SPATA31A1Q5TZJ5 1347 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 TTC34A8MYJ7 566 aa4.91□□□□□ -1.62
CDC42BPA-211ENST00000466538 ZNF202O95125 648 aa4.91□□□□□ -1.62
CDC42BPA-211ENST00000466538 GRK5P34947 590 aa4.91□□□□□ -1.62
CDC42BPA-211ENST00000466538 RARRES1P49788 294 aa4.91□□□□□ -1.62
CDC42BPA-211ENST00000466538 CCT8P50990 548 aa4.91□□□□□ -1.62
CDC42BPA-211ENST00000466538 FOXL2P58012 376 aa4.91□□□□□ -1.62
CDC42BPA-211ENST00000466538 GPC5P78333 572 aa4.91□□□□□ -1.62
CDC42BPA-211ENST00000466538 PSG6Q00889 435 aa4.91□□□□□ -1.62
CDC42BPA-211ENST00000466538 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.91□□□□□ -1.62
CDC42BPA-211ENST00000466538 MAPK7Q13164 816 aa4.91□□□□□ -1.62
CDC42BPA-211ENST00000466538 SLC4A8Q2Y0W8 1093 aa4.91□□□□□ -1.62
CDC42BPA-211ENST00000466538 FAM153CQ494X1 144 aa4.91□□□□□ -1.62
CDC42BPA-211ENST00000466538 NAA35Q5VZE5 725 aa4.91□□□□□ -1.62
CDC42BPA-211ENST00000466538 ANKRD40Q6AI12 368 aa4.91□□□□□ -1.62
CDC42BPA-211ENST00000466538 C16orf89Q6UX73 402 aa4.91□□□□□ -1.62
CDC42BPA-211ENST00000466538 VRK3Q8IV63 474 aa4.91□□□□□ -1.62
CDC42BPA-211ENST00000466538 TSPYL6Q8N831 410 aa4.91□□□□□ -1.62
CDC42BPA-211ENST00000466538 PRR11Q96HE9 360 aaPredicted RBP4.91□□□□□ -1.62
CDC42BPA-211ENST00000466538 REEP2Q9BRK0 252 aa4.91□□□□□ -1.62
CDC42BPA-211ENST00000466538 ZNF747Q9BV97 191 aa4.91□□□□□ -1.62
CDC42BPA-211ENST00000466538 ZHX3Q9H4I2 956 aa4.91□□□□□ -1.62
CDC42BPA-211ENST00000466538 CDCP1Q9H5V8 836 aa4.91□□□□□ -1.62
CDC42BPA-211ENST00000466538 JMJD4Q9H9V9 463 aa4.91□□□□□ -1.62
CDC42BPA-211ENST00000466538 USP29Q9HBJ7 922 aa4.91□□□□□ -1.62
CDC42BPA-211ENST00000466538 ABHD10Q9NUJ1 306 aa4.91□□□□□ -1.62
CDC42BPA-211ENST00000466538 DNAJC16Q9Y2G8 782 aa4.91□□□□□ -1.62
CDC42BPA-211ENST00000466538 PCDHA10Q9Y5I2 948 aa4.91□□□□□ -1.62
CDC42BPA-211ENST00000466538 GRID2IPA4D2P6 1211 aa4.9□□□□□ -1.63
CDC42BPA-211ENST00000466538 LINC00473A8K010 186 aa4.9□□□□□ -1.63
CDC42BPA-211ENST00000466538 NPIPB8E9PQR5 432 aa4.9□□□□□ -1.63
CDC42BPA-211ENST00000466538 H3BNC9 293 aa4.9□□□□□ -1.63
CDC42BPA-211ENST00000466538 M0QYT0 321 aa4.9□□□□□ -1.63
CDC42BPA-211ENST00000466538 MBPP02686 304 aaPredicted RBP4.9□□□□□ -1.63
CDC42BPA-211ENST00000466538 EBLN1P0CF75 366 aa4.9□□□□□ -1.63
CDC42BPA-211ENST00000466538 CHN1P15882 459 aa4.9□□□□□ -1.63
CDC42BPA-211ENST00000466538 ITPKBP27987 946 aa4.9□□□□□ -1.63
CDC42BPA-211ENST00000466538 CCR5P51681 352 aa4.9□□□□□ -1.63
CDC42BPA-211ENST00000466538 HOXA4Q00056 320 aaPredicted RBP4.9□□□□□ -1.63
CDC42BPA-211ENST00000466538 G3BP1Q13283 466 aaKnown RBP eCLIP4.9□□□□□ -1.63
CDC42BPA-211ENST00000466538 DLGAP5Q15398 846 aa4.9□□□□□ -1.63
CDC42BPA-211ENST00000466538 TMEM88Q6PEY1 159 aa4.9□□□□□ -1.63
CDC42BPA-211ENST00000466538 LINC01465Q8N7H1 131 aa4.9□□□□□ -1.63
CDC42BPA-211ENST00000466538 TERB1Q8NA31 727 aa4.9□□□□□ -1.63
CDC42BPA-211ENST00000466538 PPHLN1Q8NEY8 458 aaKnown RBP4.9□□□□□ -1.63
CDC42BPA-211ENST00000466538 HVCN1Q96D96 273 aa4.9□□□□□ -1.63
CDC42BPA-211ENST00000466538 TRMT61AQ96FX7 289 aaKnown RBP4.9□□□□□ -1.63
CDC42BPA-211ENST00000466538 RAB21Q9UL25 225 aa4.9□□□□□ -1.63
CDC42BPA-211ENST00000466538 TRPC5Q9UL62 973 aaPredicted RBP4.9□□□□□ -1.63
CDC42BPA-211ENST00000466538 PCDHB2Q9Y5E7 798 aa4.9□□□□□ -1.63
CDC42BPA-211ENST00000466538 SALL3Q9BXA9 1300 aa4.9□□□□□ -1.63
CDC42BPA-211ENST00000466538 TISP43B9A030 160 aa4.89□□□□□ -1.63
CDC42BPA-211ENST00000466538 PRAMEF2O60811 474 aa4.89□□□□□ -1.63
CDC42BPA-211ENST00000466538 RHOBTB3O94955 611 aa4.89□□□□□ -1.63
CDC42BPA-211ENST00000466538 HEXIM1O94992 359 aaKnown RBP4.89□□□□□ -1.63
CDC42BPA-211ENST00000466538 MT-CO3P00414 261 aa4.89□□□□□ -1.63
CDC42BPA-211ENST00000466538 ALDOAP04075 364 aaKnown RBP4.89□□□□□ -1.63
CDC42BPA-211ENST00000466538 CYP21A2P08686 494 aa4.89□□□□□ -1.63
CDC42BPA-211ENST00000466538 ELFN1P0C7U0 828 aa4.89□□□□□ -1.63
CDC42BPA-211ENST00000466538 IGFBP2P18065 325 aa4.89□□□□□ -1.63
CDC42BPA-211ENST00000466538 ELF1P32519 619 aa4.89□□□□□ -1.63
CDC42BPA-211ENST00000466538 GALNSP34059 522 aa4.89□□□□□ -1.63
CDC42BPA-211ENST00000466538 RCAN1P53805 252 aa4.89□□□□□ -1.63
CDC42BPA-211ENST00000466538 RNASELQ05823 741 aaKnown RBP4.89□□□□□ -1.63
CDC42BPA-211ENST00000466538 GPR162Q16538 588 aa4.89□□□□□ -1.63
CDC42BPA-211ENST00000466538 RNASE12Q5GAN4 147 aaKnown RBP4.89□□□□□ -1.63
CDC42BPA-211ENST00000466538 WDR45BQ5MNZ6 344 aa4.89□□□□□ -1.63
CDC42BPA-211ENST00000466538 CBWD5Q5RIA9 395 aa4.89□□□□□ -1.63
CDC42BPA-211ENST00000466538 ANO7Q6IWH7 933 aa4.89□□□□□ -1.63
CDC42BPA-211ENST00000466538 CEP85Q6P2H3 762 aa4.89□□□□□ -1.63
CDC42BPA-211ENST00000466538 DENND1BQ6P3S1 775 aa4.89□□□□□ -1.63
CDC42BPA-211ENST00000466538 KIRREL2Q6UWL6 708 aa4.89□□□□□ -1.63
CDC42BPA-211ENST00000466538 SLC29A4Q7RTT9 530 aa4.89□□□□□ -1.63
CDC42BPA-211ENST00000466538 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.89□□□□□ -1.63
CDC42BPA-211ENST00000466538 LAS2Q8IYD9 372 aa4.89□□□□□ -1.63
CDC42BPA-211ENST00000466538 ANKRD44Q8N8A2 993 aa4.89□□□□□ -1.63
CDC42BPA-211ENST00000466538 ADPRHL1Q8NDY3 354 aa4.89□□□□□ -1.63
CDC42BPA-211ENST00000466538 SKA1Q96BD8 255 aa4.89□□□□□ -1.63
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