RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 P4HA1P13674 534 aa14.35□□□□□ -0.11
TGFBR3-204ENST00000465892 EIF4BP23588 611 aaKnown RBP14.35□□□□□ -0.11
TGFBR3-204ENST00000465892 KLF10Q13118 480 aa14.35□□□□□ -0.11
TGFBR3-204ENST00000465892 PDE1CQ14123 709 aaPredicted RBP14.35□□□□□ -0.11
TGFBR3-204ENST00000465892 PCLAFQ15004 111 aa14.35□□□□□ -0.11
TGFBR3-204ENST00000465892 SNX32Q86XE0 403 aa14.35□□□□□ -0.11
TGFBR3-204ENST00000465892 C4orf19Q8IY42 314 aa14.35□□□□□ -0.11
TGFBR3-204ENST00000465892 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.35□□□□□ -0.11
TGFBR3-204ENST00000465892 TMEM143Q96AN5 459 aa14.35□□□□□ -0.11
TGFBR3-204ENST00000465892 TARS2Q9BW92 718 aaKnown RBP14.35□□□□□ -0.11
TGFBR3-204ENST00000465892 CISHQ9NSE2 258 aa14.35□□□□□ -0.11
TGFBR3-204ENST00000465892 C6orf203Q9P0P8 240 aaPredicted RBP14.35□□□□□ -0.11
TGFBR3-204ENST00000465892 RAB26Q9ULW5 256 aa14.35□□□□□ -0.11
TGFBR3-204ENST00000465892 GREB1LQ9C091 1923 aaPredicted RBP14.35□□□□□ -0.11
TGFBR3-204ENST00000465892 CROCCQ5TZA2 2017 aa14.35□□□□□ -0.11
TGFBR3-204ENST00000465892 ALDOAP04075 364 aaKnown RBP14.35□□□□□ -0.11
TGFBR3-204ENST00000465892 MYL6P60660 151 aa14.35□□□□□ -0.11
TGFBR3-204ENST00000465892 ADGRE1Q14246 886 aa14.35□□□□□ -0.11
TGFBR3-204ENST00000465892 POTEHQ6S545 545 aa14.35□□□□□ -0.11
TGFBR3-204ENST00000465892 ARCQ7LC44 396 aa14.35□□□□□ -0.11
TGFBR3-204ENST00000465892 TAAR1Q96RJ0 339 aa14.35□□□□□ -0.11
TGFBR3-204ENST00000465892 IMPG2Q9BZV3 1241 aa14.35□□□□□ -0.11
TGFBR3-204ENST00000465892 ZNF696Q9H7X3 374 aa14.35□□□□□ -0.11
TGFBR3-204ENST00000465892 TMEM216Q9P0N5 145 aa14.35□□□□□ -0.11
TGFBR3-204ENST00000465892 FZD1Q9UP38 647 aa14.35□□□□□ -0.11
TGFBR3-204ENST00000465892 BIRC5O15392 142 aa14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 XPOTO43592 962 aaKnown RBP14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 SPAG6O75602 509 aa14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 OATP04181 439 aa14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 PRKCHP24723 683 aa14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 TCF7P36402 384 aaPredicted RBP14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 APOFQ13790 326 aa14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 PPP2R5DQ14738 602 aa14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 SCYL2Q6P3W7 929 aa14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 THNSL1Q8IYQ7 743 aa14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 SMYD1Q8NB12 490 aa14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 RNF169Q8NCN4 708 aa14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 EME1Q96AY2 570 aa14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 PEBP4Q96S96 227 aa14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 ARMC7Q9H6L4 198 aa14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 ZNF219Q9P2Y4 722 aaPredicted RBP14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 NXF1Q9UBU9 619 aaKnown RBP14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 SEPT9Q9UHD8 586 aaPredicted RBP14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 RIMS3Q9UJD0 308 aa14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 USP18Q9UMW8 372 aa14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 PSAT1Q9Y617 370 aa14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 MYO18AQ92614 2054 aaKnown RBP14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 COL5A3P25940 1745 aaPredicted RBP14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 TMEM221A6NGB7 291 aa14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 ZNF195O14628 629 aa14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 COL6A2P12110 1019 aa14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 TSHRP16473 764 aa14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 PSMC3P17980 439 aa14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 GARTP22102 1010 aa14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 ABCG1P45844 678 aa14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 RAP1GAPP47736 663 aa14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 CRY2Q49AN0 593 aa14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 CES3Q6UWW8 571 aa14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 MYO1HQ8N1T3 1032 aa14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 NETO2Q8NC67 525 aa14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 NLRP7Q8WX94 980 aa14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 MASTLQ96GX5 879 aa14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 CPXM1Q96SM3 734 aa14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 MSTO1Q9BUK6 570 aa14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 MTMR12Q9C0I1 747 aa14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 EBF1Q9UH73 591 aa14.34□□□□□ -0.11
TGFBR3-204ENST00000465892 XIRP1Q702N8 1843 aaKnown RBP14.33□□□□□ -0.11
TGFBR3-204ENST00000465892 C7orf72A4D263 438 aa14.33□□□□□ -0.12
TGFBR3-204ENST00000465892 TRIM43BA6NCK2 446 aa14.33□□□□□ -0.12
TGFBR3-204ENST00000465892 PPEF1O14829 653 aaPredicted RBP14.33□□□□□ -0.12
TGFBR3-204ENST00000465892 METTL18O95568 372 aa14.33□□□□□ -0.12
TGFBR3-204ENST00000465892 TNFSF9P41273 254 aa14.33□□□□□ -0.12
TGFBR3-204ENST00000465892 CCR10P46092 362 aa14.33□□□□□ -0.12
TGFBR3-204ENST00000465892 GABRB2P47870 512 aa14.33□□□□□ -0.12
TGFBR3-204ENST00000465892 NDST2P52849 883 aa14.33□□□□□ -0.12
TGFBR3-204ENST00000465892 DGKZQ13574 1117 aa14.33□□□□□ -0.12
TGFBR3-204ENST00000465892 C15orf59Q2T9L4 293 aaPredicted RBP14.33□□□□□ -0.12
TGFBR3-204ENST00000465892 MTERF2Q49AM1 385 aa14.33□□□□□ -0.12
TGFBR3-204ENST00000465892 SWSAP1Q6NVH7 229 aa14.33□□□□□ -0.12
TGFBR3-204ENST00000465892 CMC1Q7Z7K0 106 aa14.33□□□□□ -0.12
TGFBR3-204ENST00000465892 ZBTB33Q86T24 672 aa14.33□□□□□ -0.12
TGFBR3-204ENST00000465892 PATL1Q86TB9 770 aaKnown RBP14.33□□□□□ -0.12
TGFBR3-204ENST00000465892 DSELQ8IZU8 1212 aa14.33□□□□□ -0.12
TGFBR3-204ENST00000465892 NLRP4Q96MN2 994 aa14.33□□□□□ -0.12
TGFBR3-204ENST00000465892 KLHL32Q96NJ5 620 aa14.33□□□□□ -0.12
TGFBR3-204ENST00000465892 POLR3FQ9H1D9 316 aaPredicted RBP14.33□□□□□ -0.12
TGFBR3-204ENST00000465892 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.33□□□□□ -0.121e-7■■■■■ 29.1
TGFBR3-204ENST00000465892 STK39Q9UEW8 545 aa14.33□□□□□ -0.12
TGFBR3-204ENST00000465892 TUBGCP4Q9UGJ1 667 aa14.33□□□□□ -0.12
TGFBR3-204ENST00000465892 FBXO40Q9UH90 709 aa14.33□□□□□ -0.12
TGFBR3-204ENST00000465892 RNF11Q9Y3C5 154 aa14.33□□□□□ -0.12
TGFBR3-204ENST00000465892 LRRIQ4A6NIV6 560 aa14.33□□□□□ -0.12
TGFBR3-204ENST00000465892 CHADO15335 359 aa14.33□□□□□ -0.12
TGFBR3-204ENST00000465892 PLIN3O60664 434 aa14.33□□□□□ -0.12
TGFBR3-204ENST00000465892 ZBED1O96006 694 aa14.33□□□□□ -0.12
TGFBR3-204ENST00000465892 RALBP11234 206 aa14.33□□□□□ -0.12
TGFBR3-204ENST00000465892 PRAMEP78395 509 aa14.33□□□□□ -0.12
TGFBR3-204ENST00000465892 TMEM198Q66K66 360 aa14.33□□□□□ -0.12
TGFBR3-204ENST00000465892 KBTBD7Q8WVZ9 684 aa14.33□□□□□ -0.12
TGFBR3-204ENST00000465892 RCN3Q96D15 328 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms