RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 SENP6Q9GZR1 1112 aaPredicted RBP20.34■□□□□ 0.85
SDF4-205ENST00000465727 TMEM134Q9H6X4 195 aa20.34■□□□□ 0.85
SDF4-205ENST00000465727 CYTH4Q9UIA0 394 aa20.34■□□□□ 0.85
SDF4-205ENST00000465727 KIAA1217Q5T5P2 1943 aa20.33■□□□□ 0.85
SDF4-205ENST00000465727 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.33■□□□□ 0.85
SDF4-205ENST00000465727 TBC1D12O60347 775 aa20.33■□□□□ 0.85
SDF4-205ENST00000465727 STK10O94804 968 aaKnown RBP20.33■□□□□ 0.85
SDF4-205ENST00000465727 NCF2P19878 526 aaPredicted RBP20.33■□□□□ 0.85
SDF4-205ENST00000465727 CCND2P30279 289 aa20.33■□□□□ 0.85
SDF4-205ENST00000465727 SERPINB8P50452 374 aa20.33■□□□□ 0.85
SDF4-205ENST00000465727 ADGRE1Q14246 886 aa20.33■□□□□ 0.85
SDF4-205ENST00000465727 PDK2Q15119 407 aa20.33■□□□□ 0.85
SDF4-205ENST00000465727 MYLK3Q32MK0 819 aa20.33■□□□□ 0.85
SDF4-205ENST00000465727 TICAM1Q8IUC6 712 aa20.33■□□□□ 0.85
SDF4-205ENST00000465727 GAB3Q8WWW8 586 aa20.33■□□□□ 0.85
SDF4-205ENST00000465727 MCRS1Q96EZ8 462 aa20.33■□□□□ 0.85
SDF4-205ENST00000465727 CPXM1Q96SM3 734 aa20.33■□□□□ 0.85
SDF4-205ENST00000465727 GRIP2Q9C0E4 1043 aa20.33■□□□□ 0.85
SDF4-205ENST00000465727 SLC38A10Q9HBR0 1119 aa20.33■□□□□ 0.85
SDF4-205ENST00000465727 TJP2Q9UDY2 1190 aa20.33■□□□□ 0.85
SDF4-205ENST00000465727 ZNF510Q9Y2H8 683 aa20.33■□□□□ 0.85
SDF4-205ENST00000465727 LRRIQ4A6NIV6 560 aa20.33■□□□□ 0.84
SDF4-205ENST00000465727 TCP10L2B9ZVM9 353 aa20.33■□□□□ 0.84
SDF4-205ENST00000465727 WDR46O15213 610 aaKnown RBP20.33■□□□□ 0.84
SDF4-205ENST00000465727 FAM58BPP0C7Q3 252 aa20.33■□□□□ 0.84
SDF4-205ENST00000465727 ZNF143P52747 638 aaPredicted RBP20.33■□□□□ 0.84
SDF4-205ENST00000465727 ADARP55265 1226 aaKnown RBP20.33■□□□□ 0.84
SDF4-205ENST00000465727 ABCE1P61221 599 aaKnown RBP20.33■□□□□ 0.84
SDF4-205ENST00000465727 NAB1Q13506 487 aa20.33■□□□□ 0.84
SDF4-205ENST00000465727 TRPC3Q13507 836 aa20.33■□□□□ 0.84
SDF4-205ENST00000465727 SURF1Q15526 300 aa20.33■□□□□ 0.84
SDF4-205ENST00000465727 DUOXA2Q1HG44 320 aa20.33■□□□□ 0.84
SDF4-205ENST00000465727 MTERF2Q49AM1 385 aa20.33■□□□□ 0.84
SDF4-205ENST00000465727 C16orf89Q6UX73 402 aa20.33■□□□□ 0.84
SDF4-205ENST00000465727 PLD5Q8N7P1 536 aa20.33■□□□□ 0.84
SDF4-205ENST00000465727 SLC7A3Q8WY07 619 aa20.33■□□□□ 0.84
SDF4-205ENST00000465727 MMP19Q99542 508 aa20.33■□□□□ 0.84
SDF4-205ENST00000465727 MTMR12Q9C0I1 747 aa20.33■□□□□ 0.84
SDF4-205ENST00000465727 VPS28Q9UK41 221 aa20.33■□□□□ 0.84
SDF4-205ENST00000465727 CDY2AQ9Y6F7 541 aa20.33■□□□□ 0.84
SDF4-205ENST00000465727 CDY1Q9Y6F8 540 aa20.33■□□□□ 0.84
SDF4-205ENST00000465727 ALDH1A2O94788 518 aa20.32■□□□□ 0.84
SDF4-205ENST00000465727 KCNA2P16389 499 aa20.32■□□□□ 0.84
SDF4-205ENST00000465727 KCNA4P22459 653 aa20.32■□□□□ 0.84
SDF4-205ENST00000465727 RBL1P28749 1068 aa20.32■□□□□ 0.84
SDF4-205ENST00000465727 ASPAP45381 313 aa20.32■□□□□ 0.84
SDF4-205ENST00000465727 MYBPC1Q00872 1141 aa20.32■□□□□ 0.84
SDF4-205ENST00000465727 RSPH3Q86UC2 560 aa20.32■□□□□ 0.84
SDF4-205ENST00000465727 VSIG10LQ86VR7 867 aa20.32■□□□□ 0.84
SDF4-205ENST00000465727 CCDC60Q8IWA6 550 aaPredicted RBP20.32■□□□□ 0.84
SDF4-205ENST00000465727 NUP93Q8N1F7 819 aa20.32■□□□□ 0.84
SDF4-205ENST00000465727 PEBP4Q96S96 227 aa20.32■□□□□ 0.84
SDF4-205ENST00000465727 RAVER2Q9HCJ3 691 aaKnown RBP20.32■□□□□ 0.84
SDF4-205ENST00000465727 JPH1Q9HDC5 661 aaPredicted RBP20.32■□□□□ 0.84
SDF4-205ENST00000465727 PNPOQ9NVS9 261 aa20.32■□□□□ 0.84
SDF4-205ENST00000465727 LOC100653049A0A140TA62 436 aa20.31■□□□□ 0.84
SDF4-205ENST00000465727 DCXO43602 365 aa20.31■□□□□ 0.84
SDF4-205ENST00000465727 KRT34O76011 436 aa20.31■□□□□ 0.84
SDF4-205ENST00000465727 TOMM70O94826 608 aa20.31■□□□□ 0.84
SDF4-205ENST00000465727 TOP3BO95985 862 aaKnown RBP20.31■□□□□ 0.84
SDF4-205ENST00000465727 ERBB2P04626 1255 aa20.31■□□□□ 0.84
SDF4-205ENST00000465727 CD19P15391 556 aa20.31■□□□□ 0.84
SDF4-205ENST00000465727 ZNF699Q32M78 642 aa20.31■□□□□ 0.84
SDF4-205ENST00000465727 FAXCQ5TGI0 409 aa20.31■□□□□ 0.84
SDF4-205ENST00000465727 ZPBP2Q6X784 338 aa20.31■□□□□ 0.84
SDF4-205ENST00000465727 ZNF534Q76KX8 674 aa20.31■□□□□ 0.84
SDF4-205ENST00000465727 CDKL2Q92772 493 aa20.31■□□□□ 0.84
SDF4-205ENST00000465727 DLG3Q92796 817 aa20.31■□□□□ 0.84
SDF4-205ENST00000465727 CNPY3Q9BT09 278 aa20.31■□□□□ 0.84
SDF4-205ENST00000465727 GLIS2Q9BZE0 524 aaPredicted RBP20.31■□□□□ 0.84
SDF4-205ENST00000465727 SHCBP1LQ9BZQ2 653 aa20.31■□□□□ 0.84
SDF4-205ENST00000465727 DDX18Q9NVP1 670 aaKnown RBP20.31■□□□□ 0.84
SDF4-205ENST00000465727 RPS6KL1Q9Y6S9 549 aa20.31■□□□□ 0.84
SDF4-205ENST00000465727 COL11A2P13942 1736 aaPredicted RBP20.31■□□□□ 0.84
SDF4-205ENST00000465727 APOL1O14791 398 aa20.31■□□□□ 0.84
SDF4-205ENST00000465727 TRMUO75648 421 aaKnown RBP20.31■□□□□ 0.84
SDF4-205ENST00000465727 ALDOAP04075 364 aaKnown RBP20.31■□□□□ 0.84
SDF4-205ENST00000465727 CAPNS1P04632 268 aa20.31■□□□□ 0.84
SDF4-205ENST00000465727 ARL2P36404 184 aa20.31■□□□□ 0.84
SDF4-205ENST00000465727 BCAR1P56945 870 aa20.31■□□□□ 0.84
SDF4-205ENST00000465727 KLF10Q13118 480 aa20.31■□□□□ 0.84
SDF4-205ENST00000465727 PDE1CQ14123 709 aaPredicted RBP20.31■□□□□ 0.84
SDF4-205ENST00000465727 STEAP4Q687X5 459 aa20.31■□□□□ 0.84
SDF4-205ENST00000465727 SCARA3Q6AZY7 606 aa20.31■□□□□ 0.84
SDF4-205ENST00000465727 C16orf46Q6P387 395 aa20.31■□□□□ 0.84
SDF4-205ENST00000465727 CYP4V2Q6ZWL3 525 aaPredicted RBP20.31■□□□□ 0.84
SDF4-205ENST00000465727 ZNF410Q86VK4 478 aa20.31■□□□□ 0.84
SDF4-205ENST00000465727 PHTF2Q8N3S3 785 aa20.31■□□□□ 0.84
SDF4-205ENST00000465727 LPAR1Q92633 364 aa20.31■□□□□ 0.84
SDF4-205ENST00000465727 MRPL1Q9BYD6 325 aaKnown RBP20.31■□□□□ 0.84
SDF4-205ENST00000465727 BTBD7Q9P203 1132 aa20.31■□□□□ 0.84
SDF4-205ENST00000465727 COPG2Q9UBF2 871 aa20.31■□□□□ 0.84
SDF4-205ENST00000465727 RIMS3Q9UJD0 308 aa20.31■□□□□ 0.84
SDF4-205ENST00000465727 PRPSAP2O60256 369 aa20.3■□□□□ 0.84
SDF4-205ENST00000465727 COQ9O75208 318 aa20.3■□□□□ 0.84
SDF4-205ENST00000465727 ASNSP08243 561 aa20.3■□□□□ 0.84
SDF4-205ENST00000465727 THRAP10827 490 aa20.3■□□□□ 0.84
SDF4-205ENST00000465727 MX2P20592 715 aa20.3■□□□□ 0.84
SDF4-205ENST00000465727 EPGNQ6UW88 154 aa20.3■□□□□ 0.84
SDF4-205ENST00000465727 ABHD15Q6UXT9 468 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms