RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 RAB27AP51159 221 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 CLCN2P51788 898 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 MAP2K6P52564 334 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 CYP4F2P78329 520 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 GABPB1Q06547 395 aaPredicted RBP3.59□□□□□ -1.83
SNX4-202ENST00000465505 CAVIN4Q5BKX8 364 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 SLC2A7Q6PXP3 512 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 MTHFD1LQ6UB35 978 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 RAPH1Q70E73 1250 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 ZNF804AQ7Z570 1209 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 CHSY1Q86X52 802 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 CCDC65Q8IXS2 484 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 CCDC13Q8IYE1 715 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 DCLK2Q8N568 766 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 LINC00469Q8N7U9 141 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 MAGEB6Q8N7X4 407 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.59□□□□□ -1.83
SNX4-202ENST00000465505 SPERTQ8NA61 448 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 ACMSDQ8TDX5 336 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 OTUD7AQ8TE49 926 aaPredicted RBP3.59□□□□□ -1.83
SNX4-202ENST00000465505 DENND1AQ8TEH3 1009 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 SCLT1Q96NL6 688 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 PI4K2AQ9BTU6 479 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 PTDSS2Q9BVG9 487 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 SARGQ9BW04 601 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 CCDC68Q9H2F9 335 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 ATP6V0A4Q9HBG4 840 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 ZCCHC17Q9NP64 241 aaKnown RBP3.59□□□□□ -1.83
SNX4-202ENST00000465505 STARD7Q9NQZ5 370 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 TBC1D22BQ9NU19 505 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 TCP11L1Q9NUJ3 509 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 LMBRD1Q9NUN5 540 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 NKIRAS2Q9NYR9 191 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 ZIM2Q9NZV7 527 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 CHMP5Q9NZZ3 219 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 CFDP1Q9UEE9 299 aaPredicted RBP3.59□□□□□ -1.83
SNX4-202ENST00000465505 SERTAD3Q9UJW9 196 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 GJD2Q9UKL4 321 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 TMX2Q9Y320 296 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 SPEF1Q9Y4P9 236 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 MAGED1Q9Y5V3 778 aaPredicted RBP3.59□□□□□ -1.83
SNX4-202ENST00000465505 SPAG9O60271 1321 aaKnown RBP3.59□□□□□ -1.83
SNX4-202ENST00000465505 E2F8A0AVK6 867 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 LACTBL1A8MY62 500 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 DYNC1I1O14576 645 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 PPEF2O14830 753 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 IKBKBO14920 756 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 HOXC11O43248 304 aaPredicted RBP3.58□□□□□ -1.84
SNX4-202ENST00000465505 ZNF254O75437 659 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 RFPL1O75677 317 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 B3GALNT1O75752 331 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 STAMBPO95630 424 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 FGFR1OPO95684 399 aaKnown RBP3.58□□□□□ -1.84
SNX4-202ENST00000465505 AGR2O95994 175 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 FTLP02792 175 aaPredicted RBP3.58□□□□□ -1.84
SNX4-202ENST00000465505 CYP1A2P05177 515 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 FESP07332 822 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 ATXN1LP0C7T5 689 aaKnown RBP3.58□□□□□ -1.84
SNX4-202ENST00000465505 KRT13P13646 458 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 ENGP17813 658 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 CYP11B2P19099 503 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 CHMLP26374 656 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 SKIV2L2P42285 1042 aaKnown RBP3.58□□□□□ -1.84
SNX4-202ENST00000465505 MTHFRP42898 656 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 RECQLP46063 649 aaPredicted RBP3.58□□□□□ -1.84
SNX4-202ENST00000465505 PXNP49023 591 aaPredicted RBP3.58□□□□□ -1.84
SNX4-202ENST00000465505 RENBPP51606 427 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 RPS6KA3P51812 740 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 NKX6-1P78426 367 aaPredicted RBP3.58□□□□□ -1.84
SNX4-202ENST00000465505 CYP4A11Q02928 519 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 RELQ04864 619 aaPredicted RBP3.58□□□□□ -1.84
SNX4-202ENST00000465505 EXOSC9Q06265 439 aaKnown RBP3.58□□□□□ -1.84
SNX4-202ENST00000465505 PICALMQ13492 652 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 DAZAP2Q15038 168 aaPredicted RBP3.58□□□□□ -1.84
SNX4-202ENST00000465505 IQCB1Q15051 598 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 ELF2Q15723 593 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 KIAA0753Q2KHM9 967 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 GFOD2Q3B7J2 385 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 HECTD3Q5T447 861 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 EMC10Q5UCC4 262 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 IL31Q6EBC2 164 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 NAPRTQ6XQN6 538 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 PARS2Q7L3T8 475 aaKnown RBP3.58□□□□□ -1.84
SNX4-202ENST00000465505 RSRC2Q7L4I2 434 aaKnown RBP3.58□□□□□ -1.84
SNX4-202ENST00000465505 LRRC43Q8N309 656 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 GALNT16Q8N428 558 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 CARNMT1Q8N4J0 409 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 C8orf58Q8NAV2 365 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 USP38Q8NB14 1042 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 NAXEQ8NCW5 288 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 RP9Q8TA86 221 aaKnown RBP3.58□□□□□ -1.84
SNX4-202ENST00000465505 ATG4AQ8WYN0 398 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 GJA10Q969M2 543 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 FAM167AQ96KS9 214 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 SH3GL3Q99963 347 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 ELAC2Q9BQ52 826 aaKnown RBP3.58□□□□□ -1.84
SNX4-202ENST00000465505 MACROD1Q9BQ69 325 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 FSD1LQ9BXM9 530 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 TTYH3Q9C0H2 523 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 PRSS22Q9GZN4 317 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms