RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 PNOCQ13519 176 aa23.81■■□□□ 1.4
USP42-205ENST00000465073 FMNL3Q8IVF7 1028 aa23.81■■□□□ 1.4
USP42-205ENST00000465073 RBBP8NLQ8NC74 664 aaPredicted RBP23.81■■□□□ 1.4
USP42-205ENST00000465073 RNF139Q8WU17 664 aa23.81■■□□□ 1.4
USP42-205ENST00000465073 NDRG1Q92597 394 aaKnown RBP23.81■■□□□ 1.4
USP42-205ENST00000465073 PRCCQ92733 491 aaPredicted RBP23.81■■□□□ 1.4
USP42-205ENST00000465073 IPO9Q96P70 1041 aaKnown RBP23.81■■□□□ 1.4
USP42-205ENST00000465073 GSDMAQ96QA5 445 aa23.81■■□□□ 1.4
USP42-205ENST00000465073 GPR174Q9BXC1 333 aa23.81■■□□□ 1.4
USP42-205ENST00000465073 CIPCQ9C0C6 399 aa23.81■■□□□ 1.4
USP42-205ENST00000465073 MEI4A8MW99 385 aa23.8■■□□□ 1.4
USP42-205ENST00000465073 GJB3O75712 270 aa23.8■■□□□ 1.4
USP42-205ENST00000465073 NCAM1P13591 858 aa23.8■■□□□ 1.4
USP42-205ENST00000465073 ZNF445P59923 1031 aa23.8■■□□□ 1.4
USP42-205ENST00000465073 ARID5AQ03989 594 aa23.8■■□□□ 1.4
USP42-205ENST00000465073 ZNF658Q5TYW1 1059 aaPredicted RBP23.8■■□□□ 1.4
USP42-205ENST00000465073 ZC3H3Q8IXZ2 948 aaKnown RBP23.8■■□□□ 1.4
USP42-205ENST00000465073 NUP58Q9BVL2 599 aa23.8■■□□□ 1.4
USP42-205ENST00000465073 GDPD2Q9HCC8 539 aa23.8■■□□□ 1.4
USP42-205ENST00000465073 KIAA1257Q9ULG3 409 aa23.8■■□□□ 1.4
USP42-205ENST00000465073 MSRB2Q9Y3D2 182 aa23.8■■□□□ 1.4
USP42-205ENST00000465073 ZFHX4Q86UP3 3567 aa23.79■■□□□ 1.4
USP42-205ENST00000465073 ADAMTS9Q9P2N4 1935 aa23.79■■□□□ 1.4
USP42-205ENST00000465073 A0A1B0GTW7 788 aa23.79■■□□□ 1.4
USP42-205ENST00000465073 IGLV3-19P01714 112 aa23.79■■□□□ 1.4
USP42-205ENST00000465073 VDRP11473 427 aa23.79■■□□□ 1.4
USP42-205ENST00000465073 CD19P15391 556 aa23.79■■□□□ 1.4
USP42-205ENST00000465073 PRKCHP24723 683 aa23.79■■□□□ 1.4
USP42-205ENST00000465073 FAM193AP78312 1265 aa23.79■■□□□ 1.4
USP42-205ENST00000465073 ZNF423Q2M1K9 1284 aa23.79■■□□□ 1.4
USP42-205ENST00000465073 BSPRYQ5W0U4 402 aa23.79■■□□□ 1.4
USP42-205ENST00000465073 ANKRD40Q6AI12 368 aa23.79■■□□□ 1.4
USP42-205ENST00000465073 SERPINA13PQ6UXR4 307 aa23.79■■□□□ 1.4
USP42-205ENST00000465073 SORCS1Q8WY21 1168 aa23.79■■□□□ 1.4
USP42-205ENST00000465073 GTPBP4Q9BZE4 634 aaKnown RBP23.79■■□□□ 1.4
USP42-205ENST00000465073 ARMCX3Q9UH62 379 aaPredicted RBP23.79■■□□□ 1.4
USP42-205ENST00000465073 KCNJ18B7U540 433 aa23.78■■□□□ 1.4
USP42-205ENST00000465073 ACADMP11310 421 aa23.78■■□□□ 1.4
USP42-205ENST00000465073 ADIGQ0VDE8 80 aa23.78■■□□□ 1.4
USP42-205ENST00000465073 TMEM215Q68D42 235 aa23.78■■□□□ 1.4
USP42-205ENST00000465073 FMR1NBQ8N0W7 255 aaPredicted RBP23.78■■□□□ 1.4
USP42-205ENST00000465073 SIX6OS1Q8N1H7 587 aa23.78■■□□□ 1.4
USP42-205ENST00000465073 KCTD13Q8WZ19 329 aa23.78■■□□□ 1.4
USP42-205ENST00000465073 ABCC13Q9NSE7 274 aa23.78■■□□□ 1.4
USP42-205ENST00000465073 STOML2Q9UJZ1 356 aa23.78■■□□□ 1.4
USP42-205ENST00000465073 METTL12A8MUP2 240 aa23.77■■□□□ 1.4
USP42-205ENST00000465073 SH3BP5O60239 455 aa23.77■■□□□ 1.4
USP42-205ENST00000465073 LATS1O95835 1130 aa23.77■■□□□ 1.4
USP42-205ENST00000465073 EPHX1P07099 455 aa23.77■■□□□ 1.4
USP42-205ENST00000465073 SETSIPP0DME0 302 aa23.77■■□□□ 1.4
USP42-205ENST00000465073 TBXAS1P24557 533 aaPredicted RBP23.77■■□□□ 1.4
USP42-205ENST00000465073 HOXD9P28356 352 aaPredicted RBP23.77■■□□□ 1.4
USP42-205ENST00000465073 COPAP53621 1224 aa23.77■■□□□ 1.4
USP42-205ENST00000465073 GRIK2Q13002 908 aa23.77■■□□□ 1.4
USP42-205ENST00000465073 ADGRF1Q5T601 910 aa23.77■■□□□ 1.4
USP42-205ENST00000465073 SCML4Q8N228 414 aa23.77■■□□□ 1.4
USP42-205ENST00000465073 UBA3Q8TBC4 463 aa23.77■■□□□ 1.4
USP42-205ENST00000465073 EDEM1Q92611 657 aa23.77■■□□□ 1.4
USP42-205ENST00000465073 TMA16Q96EY4 203 aaKnown RBP23.77■■□□□ 1.4
USP42-205ENST00000465073 CNGB3Q9NQW8 809 aa23.77■■□□□ 1.4
USP42-205ENST00000465073 SFMBT1Q9UHJ3 866 aa23.77■■□□□ 1.4
USP42-205ENST00000465073 AKAP13Q12802 2813 aa23.76■■□□□ 1.39
USP42-205ENST00000465073 YJEFN3A6XGL0 299 aa23.76■■□□□ 1.39
USP42-205ENST00000465073 E7ENQ6 273 aa23.76■■□□□ 1.39
USP42-205ENST00000465073 O00370 1275 aa23.76■■□□□ 1.39
USP42-205ENST00000465073 TSPAN3O60637 253 aa23.76■■□□□ 1.39
USP42-205ENST00000465073 SMC2O95347 1197 aa23.76■■□□□ 1.39
USP42-205ENST00000465073 LRRC63Q05C16 580 aa23.76■■□□□ 1.39
USP42-205ENST00000465073 TRIP6Q15654 476 aaKnown RBP23.76■■□□□ 1.39
USP42-205ENST00000465073 WFIKKN2Q8TEU8 576 aa23.76■■□□□ 1.39
USP42-205ENST00000465073 SLC35C1Q96A29 364 aa23.76■■□□□ 1.39
USP42-205ENST00000465073 MIR1-1HGQ9H1L0 117 aa23.76■■□□□ 1.39
USP42-205ENST00000465073 PCED1AQ9H1Q7 454 aa23.76■■□□□ 1.39
USP42-205ENST00000465073 KLK13Q9UKR3 277 aa23.76■■□□□ 1.39
USP42-205ENST00000465073 PLA2G4CQ9UP65 541 aa23.76■■□□□ 1.39
USP42-205ENST00000465073 PCDHB9Q9Y5E1 797 aa23.76■■□□□ 1.39
USP42-205ENST00000465073 FAM221BA6H8Z2 402 aa23.75■■□□□ 1.39
USP42-205ENST00000465073 ZZEF1O43149 2961 aa23.75■■□□□ 1.39
USP42-205ENST00000465073 PMS1P54277 932 aaKnown RBP23.75■■□□□ 1.39
USP42-205ENST00000465073 CAMK2GQ13555 558 aaPredicted RBP23.75■■□□□ 1.39
USP42-205ENST00000465073 PKDCCQ504Y2 493 aa23.75■■□□□ 1.39
USP42-205ENST00000465073 DCAF12L1Q5VU92 463 aa23.75■■□□□ 1.39
USP42-205ENST00000465073 LCLAT1Q6UWP7 414 aa23.75■■□□□ 1.39
USP42-205ENST00000465073 UBR7Q8N806 425 aa23.75■■□□□ 1.39
USP42-205ENST00000465073 OR2T3Q8NH03 318 aa23.75■■□□□ 1.39
USP42-205ENST00000465073 CAMK1GQ96NX5 476 aa23.75■■□□□ 1.39
USP42-205ENST00000465073 FAM208BQ5VWN6 2430 aa23.75■■□□□ 1.39
USP42-205ENST00000465073 BCAT2O15382 392 aaPredicted RBP23.75■■□□□ 1.39
USP42-205ENST00000465073 PAEPP09466 180 aa23.75■■□□□ 1.39
USP42-205ENST00000465073 HLA-FP30511 346 aa23.75■■□□□ 1.39
USP42-205ENST00000465073 LRMPQ12912 555 aa23.75■■□□□ 1.39
USP42-205ENST00000465073 RAB44Q7Z6P3 723 aaPredicted RBP23.75■■□□□ 1.39
USP42-205ENST00000465073 NAXDQ8IW45 347 aa23.75■■□□□ 1.39
USP42-205ENST00000465073 CHCHD4Q8N4Q1 142 aa23.75■■□□□ 1.39
USP42-205ENST00000465073 ZCCHC9Q8N567 271 aaKnown RBP23.75■■□□□ 1.39
USP42-205ENST00000465073 SPATA20Q8TB22 786 aa23.75■■□□□ 1.39
USP42-205ENST00000465073 ZCCHC14Q8WYQ9 949 aaKnown RBP23.75■■□□□ 1.39
USP42-205ENST00000465073 METTL14Q9HCE5 456 aaKnown RBP23.75■■□□□ 1.39
USP42-205ENST00000465073 GOLGA6L4A6NEF3 574 aa23.74■■□□□ 1.39
USP42-205ENST00000465073 C7P10643 843 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms