RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 TMC6Q7Z403 805 aa15.08■□□□□ 0
SQSTM1-205ENST00000464493 C12orf40Q86WS4 652 aa15.08■□□□□ 0
SQSTM1-205ENST00000464493 C3orf20Q8ND61 904 aa15.08■□□□□ 0
SQSTM1-205ENST00000464493 BHMTQ93088 406 aa15.08■□□□□ 0
SQSTM1-205ENST00000464493 RNF34Q969K3 372 aa15.08■□□□□ 0
SQSTM1-205ENST00000464493 PGAP3Q96FM1 320 aaPredicted RBP15.08■□□□□ 0
SQSTM1-205ENST00000464493 XPO6Q96QU8 1125 aaKnown RBP15.08■□□□□ 0
SQSTM1-205ENST00000464493 PNKPQ96T60 521 aa15.08■□□□□ 0
SQSTM1-205ENST00000464493 DNAJC7Q99615 494 aa15.08■□□□□ 0
SQSTM1-205ENST00000464493 SELENOOQ9BVL4 669 aa15.08■□□□□ 0
SQSTM1-205ENST00000464493 TMEM51Q9NW97 253 aa15.08■□□□□ 0
SQSTM1-205ENST00000464493 ZNHIT6Q9NWK9 470 aaKnown RBP15.08■□□□□ 0
SQSTM1-205ENST00000464493 ARHGAP20Q9P2F6 1191 aa15.08■□□□□ 0
SQSTM1-205ENST00000464493 ADAMTS1Q9UHI8 967 aa15.08■□□□□ 0
SQSTM1-205ENST00000464493 SLC12A6Q9UHW9 1150 aa15.08■□□□□ 0
SQSTM1-205ENST00000464493 ZNF318Q5VUA4 2279 aa15.08■□□□□ 0
SQSTM1-205ENST00000464493 KMT2EQ8IZD2 1858 aa15.08■□□□□ 0
SQSTM1-205ENST00000464493 GOLGA6L7A0A1B0GV03 622 aa15.07■□□□□ 0
SQSTM1-205ENST00000464493 SIGLEC16A6NMB1 481 aa15.07■□□□□ 0
SQSTM1-205ENST00000464493 KCNU1A8MYU2 1149 aa15.07■□□□□ 0
SQSTM1-205ENST00000464493 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.07■□□□□ 0
SQSTM1-205ENST00000464493 MFAP3LO75121 409 aa15.07■□□□□ 0
SQSTM1-205ENST00000464493 TULP3O75386 442 aa15.07■□□□□ 0
SQSTM1-205ENST00000464493 GJB6O95452 261 aa15.07■□□□□ 0
SQSTM1-205ENST00000464493 MOCS2O96007 188 aaPredicted RBP15.07■□□□□ 0
SQSTM1-205ENST00000464493 F9P00740 461 aa15.07■□□□□ 0
SQSTM1-205ENST00000464493 EGFP01133 1207 aa15.07■□□□□ 0
SQSTM1-205ENST00000464493 PDGFRAP16234 1089 aa15.07■□□□□ 0
SQSTM1-205ENST00000464493 TFE3P19532 575 aaPredicted RBP15.07■□□□□ 0
SQSTM1-205ENST00000464493 ABCB4P21439 1286 aa15.07■□□□□ 0
SQSTM1-205ENST00000464493 RRM1P23921 792 aa15.07■□□□□ 0
SQSTM1-205ENST00000464493 NUBP1P53384 320 aa15.07■□□□□ 0
SQSTM1-205ENST00000464493 ADKP55263 362 aaKnown RBP15.07■□□□□ 0
SQSTM1-205ENST00000464493 TBX2Q13207 712 aaPredicted RBP15.07■□□□□ 0
SQSTM1-205ENST00000464493 PPP2R5DQ14738 602 aa15.07■□□□□ 0
SQSTM1-205ENST00000464493 PREPLQ4J6C6 727 aaPredicted RBP15.07■□□□□ 0
SQSTM1-205ENST00000464493 FYB2Q5VWT5 728 aa15.07■□□□□ 0
SQSTM1-205ENST00000464493 TRNP1Q6NT89 227 aa15.07■□□□□ 0
SQSTM1-205ENST00000464493 DNAJC24Q6P3W2 148 aa15.07■□□□□ 0
SQSTM1-205ENST00000464493 WDR59Q6PJI9 974 aa15.07■□□□□ 0
SQSTM1-205ENST00000464493 SND1Q7KZF4 910 aaKnown RBP eCLIP15.07■□□□□ 03e-8■□□□□ 8.1
SQSTM1-205ENST00000464493 ETFBKMTQ8IXQ9 262 aa15.07■□□□□ 0
SQSTM1-205ENST00000464493 SYNPOQ8N3V7 929 aa15.07■□□□□ 0
SQSTM1-205ENST00000464493 EMC1Q8N766 993 aa15.07■□□□□ 0
SQSTM1-205ENST00000464493 ATP6V0D2Q8N8Y2 350 aa15.07■□□□□ 0
SQSTM1-205ENST00000464493 DTWD2Q8NBA8 298 aa15.07■□□□□ 0
SQSTM1-205ENST00000464493 JOSD2Q8TAC2 188 aa15.07■□□□□ 0
SQSTM1-205ENST00000464493 DDI1Q8WTU0 396 aa15.07■□□□□ 0
SQSTM1-205ENST00000464493 RXFP2Q8WXD0 754 aa15.07■□□□□ 0
SQSTM1-205ENST00000464493 TMA16Q96EY4 203 aaKnown RBP15.07■□□□□ 0
SQSTM1-205ENST00000464493 MRFAP1L1Q96HT8 127 aa15.07■□□□□ 0
SQSTM1-205ENST00000464493 BTN2A3PQ96KV6 586 aa15.07■□□□□ 0
SQSTM1-205ENST00000464493 CFAP57Q96MR6 1250 aa15.07■□□□□ 0
SQSTM1-205ENST00000464493 TBCBQ99426 244 aa15.07■□□□□ 0
SQSTM1-205ENST00000464493 DDX50Q9BQ39 737 aaKnown RBP15.07■□□□□ 0
SQSTM1-205ENST00000464493 RBM12Q9NTZ6 932 aaKnown RBP15.07■□□□□ 0
SQSTM1-205ENST00000464493 ABHD10Q9NUJ1 306 aa15.07■□□□□ 0
SQSTM1-205ENST00000464493 PLK2Q9NYY3 685 aa15.07■□□□□ 0
SQSTM1-205ENST00000464493 CALCOCO1Q9P1Z2 691 aa15.07■□□□□ 0
SQSTM1-205ENST00000464493 DEC1Q9P2X7 70 aa15.07■□□□□ 0
SQSTM1-205ENST00000464493 A0A087X0T9 212 aa15.06■□□□□ 0
SQSTM1-205ENST00000464493 A0A0A0MRY4 1105 aa15.06■□□□□ 0
SQSTM1-205ENST00000464493 TCRBV5S1A1TA0A578 114 aa15.06■□□□□ 0
SQSTM1-205ENST00000464493 C2CD4BA6NLJ0 364 aa15.06■□□□□ 0
SQSTM1-205ENST00000464493 AKR1B15C9JRZ8 316 aaPredicted RBP15.06■□□□□ 0
SQSTM1-205ENST00000464493 CACNG3O60359 315 aa15.06■□□□□ 0
SQSTM1-205ENST00000464493 TSPAN3O60637 253 aa15.06■□□□□ 0
SQSTM1-205ENST00000464493 PENKP01210 267 aaPredicted RBP15.06■□□□□ 0
SQSTM1-205ENST00000464493 FAM228BP0C875 321 aa15.06■□□□□ 0
SQSTM1-205ENST00000464493 SDC4P31431 198 aa15.06■□□□□ 0
SQSTM1-205ENST00000464493 RFC1P35251 1148 aaPredicted RBP15.06■□□□□ 0
SQSTM1-205ENST00000464493 DEUP1Q05D60 604 aa15.06■□□□□ 0
SQSTM1-205ENST00000464493 MTA1Q13330 715 aa15.06■□□□□ 0
SQSTM1-205ENST00000464493 CCDC14Q49A88 953 aa15.06■□□□□ 0
SQSTM1-205ENST00000464493 MPPE1Q53F39 396 aa15.06■□□□□ 0
SQSTM1-205ENST00000464493 FAM133BQ5BKY9 247 aaKnown RBP15.06■□□□□ 0
SQSTM1-205ENST00000464493 OTUD1Q5VV17 481 aaPredicted RBP15.06■□□□□ 0
SQSTM1-205ENST00000464493 NADSYN1Q6IA69 706 aa15.06■□□□□ 0
SQSTM1-205ENST00000464493 DNAAF5Q86Y56 855 aa15.06■□□□□ 0
SQSTM1-205ENST00000464493 CNGA4Q8IV77 575 aa15.06■□□□□ 0
SQSTM1-205ENST00000464493 P2RY11Q96G91 374 aa15.06■□□□□ 0
SQSTM1-205ENST00000464493 ADAM33Q9BZ11 813 aa15.06■□□□□ 0
SQSTM1-205ENST00000464493 IRX2Q9BZI1 471 aaPredicted RBP15.06■□□□□ 0
SQSTM1-205ENST00000464493 ISCUQ9H1K1 167 aa15.06■□□□□ 0
SQSTM1-205ENST00000464493 WDCPQ9H6R7 721 aa15.06■□□□□ 0
SQSTM1-205ENST00000464493 ARHGEF4Q9NR80 690 aa15.06■□□□□ 0
SQSTM1-205ENST00000464493 PIGVQ9NUD9 493 aa15.06■□□□□ 0
SQSTM1-205ENST00000464493 DNAJC17Q9NVM6 304 aaKnown RBP15.06■□□□□ 0
SQSTM1-205ENST00000464493 XPO7Q9UIA9 1087 aaKnown RBP15.06■□□□□ 0
SQSTM1-205ENST00000464493 WDFY4Q6ZS81 3184 aa15.06■□□□□ 0
SQSTM1-205ENST00000464493 ANKRD62A6NC57 917 aa15.05■□□□□ -0
SQSTM1-205ENST00000464493 GFRA2O00451 464 aa15.05■□□□□ -0
SQSTM1-205ENST00000464493 ENDOD1O94919 500 aa15.05■□□□□ -0
SQSTM1-205ENST00000464493 KAT7O95251 611 aa15.05■□□□□ -0
SQSTM1-205ENST00000464493 APODP05090 189 aa15.05■□□□□ -0
SQSTM1-205ENST00000464493 SLC6A4P31645 630 aa15.05■□□□□ -0
SQSTM1-205ENST00000464493 RDXP35241 583 aaKnown RBP15.05■□□□□ -0
SQSTM1-205ENST00000464493 EIF4A3P38919 411 aaKnown RBP15.05■□□□□ -0
SQSTM1-205ENST00000464493 GRIA2P42262 883 aa15.05■□□□□ -0
SQSTM1-205ENST00000464493 CXCR3P49682 368 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms