RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 HERC6Q8IVU3 1022 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 TBC1D3Q8IZP1 549 aaPredicted RBP4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 TERB1Q8NA31 727 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 CEP70Q8NHQ1 597 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 CSGALNACT1Q8TDX6 532 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 PNISRQ8TF01 805 aaKnown RBP4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 EVI5LQ96CN4 794 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 EDC3Q96F86 508 aaKnown RBP4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 UROC1Q96N76 676 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 BBC3Q96PG8 261 aaPredicted RBP4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 SNX18Q96RF0 628 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 DUSP26Q9BV47 211 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 MECRQ9BV79 373 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 TMPRSS5Q9H3S3 457 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 CDCP1Q9H5V8 836 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 NOD2Q9HC29 1040 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 SLC17A6Q9P2U8 582 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 RAB21Q9UL25 225 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 TRPC5Q9UL62 973 aaPredicted RBP4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 VPS4AQ9UN37 437 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 H7C1Q1 480 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 M0QZQ0 153 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 SEPT4O43236 478 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 HNRNPRO43390 633 aaKnown RBP4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 SH3BP5O60239 455 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 EXOC3O60645 756 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 PRAMEF2O60811 474 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 HNRNPCP07910 306 aaKnown RBP eCLIP4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 KRT4P19013 534 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 SLC8A1P32418 973 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 GALNSP34059 522 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 PLA2G5P39877 138 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 GDF5P43026 501 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 PCP4P48539 62 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 COPB1P53618 953 aaKnown RBP4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 CACNA2D1P54289 1103 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 RPL15P61313 204 aaKnown RBP4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 CYP4F2P78329 520 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 ZXDAP98168 799 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 TLE3Q04726 772 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 KCNB1Q14721 858 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 AKNAD1Q5T1N1 836 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 VSTM1Q6UX27 236 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 TRIM72Q6ZMU5 477 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 SYT13Q7L8C5 426 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 BCDIN3DQ7Z5W3 292 aaKnown RBP4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 ANKS1BQ7Z6G8 1248 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 Q8N1X5 172 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 LINC01465Q8N7H1 131 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 FSIP1Q8NA03 581 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 MAFAQ8NHW3 353 aaPredicted RBP4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 SLC2A12Q8TD20 617 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 PRR11Q96HE9 360 aaPredicted RBP4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 COG8Q96MW5 612 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 FYTTD1Q96QD9 318 aaKnown RBP4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 TIMP4Q99727 224 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 ADGRE3Q9BY15 652 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 KRTAP4-2Q9BYR5 136 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 CHODLQ9H9P2 273 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 RIC8AQ9NPQ8 531 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 ABHD10Q9NUJ1 306 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 PDP2Q9P2J9 529 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 ANAPC4Q9UJX5 808 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 KCND3Q9UK17 655 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 TLK1Q9UKI8 766 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 GJD2Q9UKL4 321 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 FZD4Q9ULV1 537 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 LZTS1Q9Y250 596 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 DERAQ9Y315 318 aa4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 RRP7AQ9Y3A4 280 aaKnown RBP4.15□□□□□ -1.75
HMGXB4-205ENST00000464480 A0A087X1B8 175 aa4.14□□□□□ -1.75
HMGXB4-205ENST00000464480 FAM90A20PA6NIJ5 464 aa4.14□□□□□ -1.75
HMGXB4-205ENST00000464480 BTBD19C9JJ37 291 aa4.14□□□□□ -1.75
HMGXB4-205ENST00000464480 UBE2Q2LH0YL09 131 aa4.14□□□□□ -1.75
HMGXB4-205ENST00000464480 M0QYT0 321 aa4.14□□□□□ -1.75
HMGXB4-205ENST00000464480 ZNF213O14771 459 aa4.14□□□□□ -1.75
HMGXB4-205ENST00000464480 MGST3O14880 152 aa4.14□□□□□ -1.75
HMGXB4-205ENST00000464480 GCATO75600 419 aa4.14□□□□□ -1.75
HMGXB4-205ENST00000464480 JTBO76095 146 aa4.14□□□□□ -1.75
HMGXB4-205ENST00000464480 MT-CO3P00414 261 aa4.14□□□□□ -1.75
HMGXB4-205ENST00000464480 C1RP00736 705 aa4.14□□□□□ -1.75
HMGXB4-205ENST00000464480 MBPP02686 304 aaPredicted RBP4.14□□□□□ -1.75
HMGXB4-205ENST00000464480 CKMT1AP12532 417 aa4.14□□□□□ -1.75
HMGXB4-205ENST00000464480 APEHP13798 732 aaKnown RBP4.14□□□□□ -1.75
HMGXB4-205ENST00000464480 WT1P19544 449 aaPredicted RBP4.14□□□□□ -1.75
HMGXB4-205ENST00000464480 GPD1P21695 349 aa4.14□□□□□ -1.75
HMGXB4-205ENST00000464480 FAM3BP58499 235 aaPredicted RBP4.14□□□□□ -1.75
HMGXB4-205ENST00000464480 TAS2R50P59544 299 aa4.14□□□□□ -1.75
HMGXB4-205ENST00000464480 WDR5P61964 334 aaKnown RBP4.14□□□□□ -1.75
HMGXB4-205ENST00000464480 HOXA4Q00056 320 aaPredicted RBP4.14□□□□□ -1.75
HMGXB4-205ENST00000464480 UBE3AQ05086 875 aa4.14□□□□□ -1.75
HMGXB4-205ENST00000464480 PDCLQ13371 301 aa4.14□□□□□ -1.75
HMGXB4-205ENST00000464480 SLC12A1Q13621 1099 aa4.14□□□□□ -1.75
HMGXB4-205ENST00000464480 MFSD13AQ14CX5 517 aa4.14□□□□□ -1.75
HMGXB4-205ENST00000464480 ANKRD1Q15327 319 aa4.14□□□□□ -1.75
HMGXB4-205ENST00000464480 CNGA3Q16281 694 aa4.14□□□□□ -1.75
HMGXB4-205ENST00000464480 CTXN3Q4LDR2 81 aa4.14□□□□□ -1.75
HMGXB4-205ENST00000464480 TMEM88Q6PEY1 159 aa4.14□□□□□ -1.75
HMGXB4-205ENST00000464480 TMEM65Q6PI78 240 aa4.14□□□□□ -1.75
HMGXB4-205ENST00000464480 SERPINA13PQ6UXR4 307 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms