RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 TCRBV5S1A1TA0A578 114 aa4.71□□□□□ -1.66
CLK1-208ENST00000464454 WIPF3A6NGB9 483 aa4.71□□□□□ -1.66
CLK1-208ENST00000464454 EFCAB8A8MWE9 144 aa4.71□□□□□ -1.66
CLK1-208ENST00000464454 DHHO43323 396 aa4.71□□□□□ -1.66
CLK1-208ENST00000464454 TAF5LO75529 589 aa4.71□□□□□ -1.66
CLK1-208ENST00000464454 TMIGD3P0DMS9 266 aaPredicted RBP4.71□□□□□ -1.66
CLK1-208ENST00000464454 DRD1P21728 446 aa4.71□□□□□ -1.66
CLK1-208ENST00000464454 MATN1P21941 496 aa4.71□□□□□ -1.66
CLK1-208ENST00000464454 KLRK1P26718 216 aa4.71□□□□□ -1.66
CLK1-208ENST00000464454 CST5P28325 142 aaPredicted RBP4.71□□□□□ -1.66
CLK1-208ENST00000464454 AKT1P31749 480 aa4.71□□□□□ -1.66
CLK1-208ENST00000464454 PBX1P40424 430 aa4.71□□□□□ -1.66
CLK1-208ENST00000464454 GSTM5P46439 218 aa4.71□□□□□ -1.66
CLK1-208ENST00000464454 GPC5P78333 572 aa4.71□□□□□ -1.66
CLK1-208ENST00000464454 TAF5Q15542 800 aa4.71□□□□□ -1.66
CLK1-208ENST00000464454 P3H1Q32P28 736 aa4.71□□□□□ -1.66
CLK1-208ENST00000464454 TMEM196Q5HYL7 178 aa4.71□□□□□ -1.66
CLK1-208ENST00000464454 ZNF782Q6ZMW2 699 aaPredicted RBP4.71□□□□□ -1.66
CLK1-208ENST00000464454 OR1N1Q8NGS0 311 aa4.71□□□□□ -1.66
CLK1-208ENST00000464454 SCAMP5Q8TAC9 235 aa4.71□□□□□ -1.66
CLK1-208ENST00000464454 DPF1Q92782 380 aa4.71□□□□□ -1.66
CLK1-208ENST00000464454 ZSCAN31Q96LW9 406 aaPredicted RBP4.71□□□□□ -1.66
CLK1-208ENST00000464454 DDX23Q9BUQ8 820 aaKnown RBP4.71□□□□□ -1.66
CLK1-208ENST00000464454 RNF26Q9BY78 433 aaPredicted RBP4.71□□□□□ -1.66
CLK1-208ENST00000464454 FSCN3Q9NQT6 498 aa4.71□□□□□ -1.66
CLK1-208ENST00000464454 SRP68Q9UHB9 627 aaKnown RBP4.71□□□□□ -1.66
CLK1-208ENST00000464454 ASAP1Q9ULH1 1129 aa4.71□□□□□ -1.66
CLK1-208ENST00000464454 FZD4Q9ULV1 537 aa4.71□□□□□ -1.66
CLK1-208ENST00000464454 NFU1Q9UMS0 254 aa4.71□□□□□ -1.66
CLK1-208ENST00000464454 FRMD4BQ9Y2L6 1034 aa4.71□□□□□ -1.66
CLK1-208ENST00000464454 ARHGEF17Q96PE2 2063 aaPredicted RBP4.71□□□□□ -1.66
CLK1-208ENST00000464454 FNDC1Q4ZHG4 1894 aaPredicted RBP4.71□□□□□ -1.66
CLK1-208ENST00000464454 HMX3A6NHT5 357 aa4.7□□□□□ -1.66
CLK1-208ENST00000464454 CA12O43570 354 aa4.7□□□□□ -1.66
CLK1-208ENST00000464454 FAM155BO75949 473 aa4.7□□□□□ -1.66
CLK1-208ENST00000464454 LATS1O95835 1130 aa4.7□□□□□ -1.66
CLK1-208ENST00000464454 TUBB4AP04350 444 aa4.7□□□□□ -1.66
CLK1-208ENST00000464454 NHLRC4P0CG21 123 aaPredicted RBP4.7□□□□□ -1.66
CLK1-208ENST00000464454 CYP2A6P11509 494 aaPredicted RBP4.7□□□□□ -1.66
CLK1-208ENST00000464454 PAX3P23760 479 aa4.7□□□□□ -1.66
CLK1-208ENST00000464454 JAK3P52333 1124 aa4.7□□□□□ -1.66
CLK1-208ENST00000464454 PNLIPRP1P54315 467 aa4.7□□□□□ -1.66
CLK1-208ENST00000464454 SEMA3BQ13214 749 aa4.7□□□□□ -1.66
CLK1-208ENST00000464454 BFSP2Q13515 415 aa4.7□□□□□ -1.66
CLK1-208ENST00000464454 MFSD13AQ14CX5 517 aa4.7□□□□□ -1.66
CLK1-208ENST00000464454 ADCK5Q3MIX3 580 aa4.7□□□□□ -1.66
CLK1-208ENST00000464454 TRIM60Q495X7 471 aa4.7□□□□□ -1.66
CLK1-208ENST00000464454 ANKRD45Q5TZF3 282 aa4.7□□□□□ -1.66
CLK1-208ENST00000464454 FAM90A2PQ658T7 463 aa4.7□□□□□ -1.66
CLK1-208ENST00000464454 GRHL2Q6ISB3 625 aa4.7□□□□□ -1.66
CLK1-208ENST00000464454 NFRKBQ6P4R8 1299 aa4.7□□□□□ -1.66
CLK1-208ENST00000464454 ZNF813Q6ZN06 617 aa4.7□□□□□ -1.66
CLK1-208ENST00000464454 RINLQ6ZS11 566 aa4.7□□□□□ -1.66
CLK1-208ENST00000464454 RAB11FIP2Q7L804 512 aa4.7□□□□□ -1.66
CLK1-208ENST00000464454 MOGAT3Q86VF5 341 aa4.7□□□□□ -1.66
CLK1-208ENST00000464454 SRRM1Q8IYB3 904 aaKnown RBP4.7□□□□□ -1.66
CLK1-208ENST00000464454 C16orf71Q8IYS4 520 aaPredicted RBP4.7□□□□□ -1.66
CLK1-208ENST00000464454 C8orf58Q8NAV2 365 aa4.7□□□□□ -1.66
CLK1-208ENST00000464454 OR6Y1Q8NGX8 325 aa4.7□□□□□ -1.66
CLK1-208ENST00000464454 TRAPPC9Q96Q05 1148 aa4.7□□□□□ -1.66
CLK1-208ENST00000464454 ADGRE3Q9BY15 652 aa4.7□□□□□ -1.66
CLK1-208ENST00000464454 BRD8Q9H0E9 1235 aa4.7□□□□□ -1.66
CLK1-208ENST00000464454 TAF1DQ9H5J8 278 aaPredicted RBP4.7□□□□□ -1.66
CLK1-208ENST00000464454 SEPSECSQ9HD40 501 aaKnown RBP4.7□□□□□ -1.66
CLK1-208ENST00000464454 VPS45Q9NRW7 570 aa4.7□□□□□ -1.66
CLK1-208ENST00000464454 SPATA31A1Q5TZJ5 1347 aa4.7□□□□□ -1.66
CLK1-208ENST00000464454 FAM90A18PA6NE21 464 aa4.69□□□□□ -1.66
CLK1-208ENST00000464454 FAM90A16PA6NEW6 464 aa4.69□□□□□ -1.66
CLK1-208ENST00000464454 FAM90A9PA6NNJ1 464 aa4.69□□□□□ -1.66
CLK1-208ENST00000464454 FAM90A5PA8MXJ8 464 aa4.69□□□□□ -1.66
CLK1-208ENST00000464454 TTC34A8MYJ7 566 aa4.69□□□□□ -1.66
CLK1-208ENST00000464454 CLIC1O00299 241 aa4.69□□□□□ -1.66
CLK1-208ENST00000464454 CER1O95813 267 aa4.69□□□□□ -1.66
CLK1-208ENST00000464454 SLC3A2P08195 630 aaKnown RBP4.69□□□□□ -1.66
CLK1-208ENST00000464454 FAM90A15PP0C7V4 464 aa4.69□□□□□ -1.66
CLK1-208ENST00000464454 FAM90A14PP0C7W9 464 aa4.69□□□□□ -1.66
CLK1-208ENST00000464454 DUSP1P28562 367 aa4.69□□□□□ -1.66
CLK1-208ENST00000464454 ADD2P35612 726 aa4.69□□□□□ -1.66
CLK1-208ENST00000464454 MAPK9P45984 424 aa4.69□□□□□ -1.66
CLK1-208ENST00000464454 SRSF4Q08170 494 aaKnown RBP4.69□□□□□ -1.66
CLK1-208ENST00000464454 CBFBQ13951 182 aa4.69□□□□□ -1.66
CLK1-208ENST00000464454 RPS6KA2Q15349 733 aa4.69□□□□□ -1.66
CLK1-208ENST00000464454 EZH2Q15910 746 aaKnown RBP4.69□□□□□ -1.66
CLK1-208ENST00000464454 CC2D1BQ5T0F9 858 aaKnown RBP4.69□□□□□ -1.66
CLK1-208ENST00000464454 CCDC144NLQ6NUI1 221 aa4.69□□□□□ -1.66
CLK1-208ENST00000464454 MSANTD2Q6P1R3 559 aa4.69□□□□□ -1.66
CLK1-208ENST00000464454 CYP26C1Q6V0L0 522 aa4.69□□□□□ -1.66
CLK1-208ENST00000464454 TRABD2AQ86V40 505 aa4.69□□□□□ -1.66
CLK1-208ENST00000464454 SUGP1Q8IWZ8 645 aaKnown RBP4.69□□□□□ -1.66
CLK1-208ENST00000464454 FTSJ3Q8IY81 847 aaKnown RBP4.69□□□□□ -1.66
CLK1-208ENST00000464454 SPPL3Q8TCT6 385 aa4.69□□□□□ -1.66
CLK1-208ENST00000464454 SDCCAG3Q96C92 435 aa4.69□□□□□ -1.66
CLK1-208ENST00000464454 EVI5LQ96CN4 794 aa4.69□□□□□ -1.66
CLK1-208ENST00000464454 PAAF1Q9BRP4 392 aa4.69□□□□□ -1.66
CLK1-208ENST00000464454 VPS16Q9H269 839 aa4.69□□□□□ -1.66
CLK1-208ENST00000464454 ELAC1Q9H777 363 aaKnown RBP4.69□□□□□ -1.66
CLK1-208ENST00000464454 C19orf53Q9UNZ5 99 aaPredicted RBP4.69□□□□□ -1.66
CLK1-208ENST00000464454 CNTN6Q9UQ52 1028 aa4.69□□□□□ -1.66
CLK1-208ENST00000464454 PPP6CO00743 305 aa4.68□□□□□ -1.66
CLK1-208ENST00000464454 FYB1O15117 783 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms